RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 ANKRD33Q7Z3H0 272 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 PARGQ86W56 976 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 SERPINA9Q86WD7 417 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 HIST3H2BBQ8N257 126 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 C11orf42Q8N5U0 333 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 FAM24BQ8N5W8 94 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 FAM71CQ8NEG0 241 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 ZNF548Q8NEK5 533 aaPredicted RBP4.27□□□□□ -1.73
LINC01109-201ENST00000603837 OR7G2Q8NG99 324 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 OR4A16Q8NH70 328 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 OR2V1Q8NHB1 315 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 DCAF4Q8WV16 495 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 TAAR8Q969N4 342 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 C12orf42Q96LP6 360 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 OR2A7Q96R45 310 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 FCRL5Q96RD9 977 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 TEX101Q9BY14 249 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 GABARAPL3Q9BY60 117 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 SLC39A8Q9C0K1 460 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 UBQLN3Q9H347 655 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 WDCPQ9H6R7 721 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 TUBA4BQ9H853 241 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 SERHLQ9NQF3 203 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 DCAF13Q9NV06 445 aaKnown RBP4.27□□□□□ -1.73
LINC01109-201ENST00000603837 ZNF226Q9NYT6 803 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 FOXJ2Q9P0K8 574 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 PRODH2Q9UF12 536 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 ZNF346Q9UL40 294 aaKnown RBP4.27□□□□□ -1.73
LINC01109-201ENST00000603837 A4GNTQ9UNA3 340 aa4.27□□□□□ -1.73
LINC01109-201ENST00000603837 TMEM265A0A087WTH1 108 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 A0A1B0GV72 72 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 KANTRA0A1W2PQU2 76 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 FAM90A7PA6NKC0 464 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 FAM90A22PA8MWA6 464 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 FAM90A12PA8MX19 464 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 FAM90A23PA8MXZ1 464 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 E9PQ18 207 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 RPL36A-HNRNPH2H7BZ11 118 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 PYCARD-AS1I3L0S3 204 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 SCDO00767 359 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 WNT9AO14904 365 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 FCMRO60667 390 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 GLCEO94923 617 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 CLDN9O95484 217 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 TGFB1P01137 390 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 MT-ND4P03905 459 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 GAPDHP04406 335 aaKnown RBP4.26□□□□□ -1.73
LINC01109-201ENST00000603837 TFPIP10646 304 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 ELK1P19419 428 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 BSGP35613 385 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 LIMS1P48059 325 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 CSNK1A1P48729 337 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 TTPAP49638 278 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 PTTG1IPP53801 180 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 DIO3P55073 304 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 CDH12P55289 794 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 UBE2MP61081 183 aaKnown RBP4.26□□□□□ -1.73
LINC01109-201ENST00000603837 PITPNAQ00169 270 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 HGFACQ04756 655 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 ZNF616Q08AN1 781 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 MLLT11Q13015 90 aaPredicted RBP4.26□□□□□ -1.73
LINC01109-201ENST00000603837 TMEM132DQ14C87 1099 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 HAGHQ16775 308 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 RNASE12Q5GAN4 147 aaKnown RBP4.26□□□□□ -1.73
LINC01109-201ENST00000603837 ZNF766Q5HY98 468 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 C6orf120Q7Z4R8 191 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 GOLGA7Q7Z5G4 137 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 MYPOPQ86VE0 399 aaPredicted RBP4.26□□□□□ -1.73
LINC01109-201ENST00000603837 KMT5CQ86Y97 462 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 SIAH3Q8IW03 269 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 ZNF100Q8IYN0 542 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 OR10Q1Q8NGQ4 319 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 OR1J4Q8NGS1 313 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 OR10A6Q8NH74 314 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 PNPLA2Q96AD5 504 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 VOPP1Q96AW1 172 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 SENP5Q96HI0 755 aaPredicted RBP4.26□□□□□ -1.73
LINC01109-201ENST00000603837 PYURFQ96I23 114 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 POM121L2Q96KW2 1035 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 GPR22Q99680 433 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 MRPL13Q9BYD1 178 aaKnown RBP4.26□□□□□ -1.73
LINC01109-201ENST00000603837 COMMD4Q9H0A8 199 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 WDR54Q9H977 334 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 NOX3Q9HBY0 568 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 ACKR4Q9NPB9 350 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 KRCC1Q9NPI7 259 aaPredicted RBP4.26□□□□□ -1.73
LINC01109-201ENST00000603837 CLDND1Q9NY35 253 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 HSPB7Q9UBY9 170 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 LSM2Q9Y333 95 aaKnown RBP4.26□□□□□ -1.73
LINC01109-201ENST00000603837 COQ4Q9Y3A0 265 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 CEP290O15078 2479 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 FITM1A5D6W6 292 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 FAM90A27PA6NNH2 459 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 A8MT66 165 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 ANHXE9PGG2 379 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 M0R129 80 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 AQP7O14520 342 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 RFXANKO14593 260 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 DIRAS1O95057 198 aa4.26□□□□□ -1.73
LINC01109-201ENST00000603837 NFATC1O95644 943 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms