RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 DUX4L5P0CJ88 424 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 DUX4L6P0CJ89 424 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 DUX4L7P0CJ90 424 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 CTSEP14091 401 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 RIDAP52758 137 aaKnown RBP15.69■□□□□ 0.1
SCARF1-205ENST00000571272 CORO6Q6QEF8 472 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 MOB3CQ70IA8 216 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 RHOUQ7L0Q8 258 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 OR2W3Q7Z3T1 314 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 KDM8Q8N371 416 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 FAM174AQ8TBP5 190 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 ADAM19Q9H013 955 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 DUX4Q9UBX2 424 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 VSIG4Q9Y279 399 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 EMC9Q9Y3B6 208 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 LRP12Q9Y561 859 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 COL4A2P08572 1712 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 A0A1B0GTI1 187 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 NSA2O95478 260 aaKnown RBP15.69■□□□□ 0.1
SCARF1-205ENST00000571272 CNR1P21554 472 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 DLSTP36957 453 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 AKR1C2P52895 323 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 SLC37A1P57057 533 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 SKP1P63208 163 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 AKR1C1Q04828 323 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 FGL1Q08830 312 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 CCINQ13939 588 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 PTPMT1Q8WUK0 201 aaPredicted RBP15.69■□□□□ 0.1
SCARF1-205ENST00000571272 CMBLQ96DG6 245 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 SULT1C2O00338 296 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 WDPCPO95876 746 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 DNASE1L1P49184 302 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 CXADRP78310 365 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 CDNFQ49AH0 187 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 SLC22A6Q4U2R8 563 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 ADGRE4PQ86SQ3 457 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 ASB17Q8WXJ9 295 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 THRSPQ92748 146 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 C8orf44Q96CB5 159 aa15.69■□□□□ 0.1
SCARF1-205ENST00000571272 RNF222A6NCQ9 220 aa15.68■□□□□ 0.1
SCARF1-205ENST00000571272 HSPB2A8KAH6 182 aa15.68■□□□□ 0.1
SCARF1-205ENST00000571272 SLC25A12O75746 678 aa15.68■□□□□ 0.1
SCARF1-205ENST00000571272 AVPR2P30518 371 aa15.68■□□□□ 0.1
SCARF1-205ENST00000571272 HSD17B7P56937 341 aa15.68■□□□□ 0.1
SCARF1-205ENST00000571272 HSPB2Q16082 182 aa15.68■□□□□ 0.1
SCARF1-205ENST00000571272 PAPD4Q6PIY7 484 aaKnown RBP15.68■□□□□ 0.1
SCARF1-205ENST00000571272 GVQW1Q8N7I0 195 aa15.68■□□□□ 0.1
SCARF1-205ENST00000571272 CLRN3Q8NCR9 226 aa15.68■□□□□ 0.1
SCARF1-205ENST00000571272 OR13C3Q8NGS6 347 aa15.68■□□□□ 0.1
SCARF1-205ENST00000571272 ASB13Q8WXK3 278 aa15.68■□□□□ 0.1
SCARF1-205ENST00000571272 OR5K4A6NMS3 321 aa15.68■□□□□ 0.1
SCARF1-205ENST00000571272 DCNP07585 359 aaKnown RBP15.68■□□□□ 0.1
SCARF1-205ENST00000571272 RPL27P61353 136 aaKnown RBP15.68■□□□□ 0.1
SCARF1-205ENST00000571272 PPP1R1AQ13522 171 aa15.68■□□□□ 0.1
SCARF1-205ENST00000571272 PRAMEF17Q5VTA0 474 aa15.68■□□□□ 0.1
SCARF1-205ENST00000571272 OR52W1Q6IF63 320 aa15.68■□□□□ 0.1
SCARF1-205ENST00000571272 KCTD18Q6PI47 426 aaPredicted RBP15.68■□□□□ 0.1
SCARF1-205ENST00000571272 UNQ6126/PRO20091Q6UXV3 157 aa15.68■□□□□ 0.1
SCARF1-205ENST00000571272 CATSPERDQ86XM0 798 aa15.68■□□□□ 0.1
SCARF1-205ENST00000571272 ZNF584Q8IVC4 421 aa15.68■□□□□ 0.1
SCARF1-205ENST00000571272 CASTOR1Q8WTX7 329 aa15.68■□□□□ 0.1
SCARF1-205ENST00000571272 NKX6-2Q9C056 277 aaPredicted RBP15.68■□□□□ 0.1
SCARF1-205ENST00000571272 CST11Q9H112 138 aa15.68■□□□□ 0.1
SCARF1-205ENST00000571272 FBRSQ9HAH7 460 aa15.68■□□□□ 0.1
SCARF1-205ENST00000571272 TMED7Q9Y3B3 224 aa15.68■□□□□ 0.1
SCARF1-205ENST00000571272 BCL2L11O43521 198 aa15.67■□□□□ 0.1
SCARF1-205ENST00000571272 CTHP32929 405 aa15.67■□□□□ 0.1
SCARF1-205ENST00000571272 PPICP45877 212 aa15.67■□□□□ 0.1
SCARF1-205ENST00000571272 MAMDC2Q7Z304 686 aaPredicted RBP15.67■□□□□ 0.1
SCARF1-205ENST00000571272 TMEM17Q86X19 198 aa15.67■□□□□ 0.1
SCARF1-205ENST00000571272 OR4D6Q8NGJ1 314 aa15.67■□□□□ 0.1
SCARF1-205ENST00000571272 TSLPQ969D9 159 aa15.67■□□□□ 0.1
SCARF1-205ENST00000571272 FAM46BQ96A09 425 aa15.67■□□□□ 0.1
SCARF1-205ENST00000571272 ZNF587Q96SQ5 575 aaPredicted RBP15.67■□□□□ 0.1
SCARF1-205ENST00000571272 SCPEP1Q9HB40 452 aa15.67■□□□□ 0.1
SCARF1-205ENST00000571272 COA3Q9Y2R0 106 aaPredicted RBP15.67■□□□□ 0.1
SCARF1-205ENST00000571272 TRAV36DV7A0A075B6V5 113 aa15.67■□□□□ 0.1
SCARF1-205ENST00000571272 IGLV1-36A0A0B4J1U3 117 aa15.67■□□□□ 0.1
SCARF1-205ENST00000571272 OR2F2O95006 317 aa15.67■□□□□ 0.1
SCARF1-205ENST00000571272 GP1BAP07359 652 aa15.67■□□□□ 0.1
SCARF1-205ENST00000571272 OR2F1Q13607 317 aa15.67■□□□□ 0.1
SCARF1-205ENST00000571272 PDSS1Q5T2R2 415 aa15.67■□□□□ 0.1
SCARF1-205ENST00000571272 KCTD9Q7L273 389 aa15.67■□□□□ 0.1
SCARF1-205ENST00000571272 CHST4Q8NCG5 386 aa15.67■□□□□ 0.1
SCARF1-205ENST00000571272 EDAQ92838 391 aa15.67■□□□□ 0.1
SCARF1-205ENST00000571272 OR11A1Q9GZK7 315 aa15.67■□□□□ 0.1
SCARF1-205ENST00000571272 DNTTIP1Q9H147 329 aa15.67■□□□□ 0.1
SCARF1-205ENST00000571272 LOC101059948A0A1B0GTJ6 334 aa15.66■□□□□ 0.1
SCARF1-205ENST00000571272 F5H0A9 414 aaPredicted RBP15.66■□□□□ 0.1
SCARF1-205ENST00000571272 IGFBP3P17936 291 aaPredicted RBP15.66■□□□□ 0.1
SCARF1-205ENST00000571272 VAMP1P23763 118 aa15.66■□□□□ 0.1
SCARF1-205ENST00000571272 ELOCQ15369 112 aa15.66■□□□□ 0.1
SCARF1-205ENST00000571272 LINC00346Q8IVM7 164 aa15.66■□□□□ 0.1
SCARF1-205ENST00000571272 OR1S2Q8NGQ3 325 aa15.66■□□□□ 0.1
SCARF1-205ENST00000571272 EDEM2Q9BV94 578 aa15.66■□□□□ 0.1
SCARF1-205ENST00000571272 LAT2Q9GZY6 243 aa15.66■□□□□ 0.1
SCARF1-205ENST00000571272 S1PR5Q9H228 398 aa15.66■□□□□ 0.1
SCARF1-205ENST00000571272 SOHLH2Q9NX45 425 aa15.66■□□□□ 0.1
SCARF1-205ENST00000571272 ARID1AO14497 2285 aa15.66■□□□□ 0.1
SCARF1-205ENST00000571272 LOC107986453A0A1B0GWG9 222 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms