RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 R4GN57 208 aa16.14■□□□□ 0.17
SMPD3-211ENST00000568373 TTLL8A6PVC2 850 aa16.13■□□□□ 0.17
SMPD3-211ENST00000568373 CENPXA8MT69 81 aa16.13■□□□□ 0.17
SMPD3-211ENST00000568373 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.13■□□□□ 0.17
SMPD3-211ENST00000568373 RPS15P62841 145 aaKnown RBP16.13■□□□□ 0.17
SMPD3-211ENST00000568373 HIST3H3Q16695 136 aa16.13■□□□□ 0.17
SMPD3-211ENST00000568373 CDCP2Q5VXM1 449 aa16.13■□□□□ 0.17
SMPD3-211ENST00000568373 CARD17Q5XLA6 110 aa16.13■□□□□ 0.17
SMPD3-211ENST00000568373 B3GNTL1Q67FW5 361 aaPredicted RBP16.13■□□□□ 0.17
SMPD3-211ENST00000568373 H3F3CQ6NXT2 135 aa16.13■□□□□ 0.17
SMPD3-211ENST00000568373 SLC25A47Q6Q0C1 308 aa16.13■□□□□ 0.17
SMPD3-211ENST00000568373 SIAH3Q8IW03 269 aa16.13■□□□□ 0.17
SMPD3-211ENST00000568373 C1orf198Q9H425 327 aa16.13■□□□□ 0.17
SMPD3-211ENST00000568373 AUNIPQ9H7T9 357 aa16.13■□□□□ 0.17
SMPD3-211ENST00000568373 NUFIP1Q9UHK0 495 aaKnown RBP16.13■□□□□ 0.17
SMPD3-211ENST00000568373 FOXJ3Q9UPW0 622 aa16.13■□□□□ 0.17
SMPD3-211ENST00000568373 ALG5Q9Y673 324 aa16.13■□□□□ 0.17
SMPD3-211ENST00000568373 FREM2Q5SZK8 3169 aa16.13■□□□□ 0.17
SMPD3-211ENST00000568373 ZNF726A6NNF4 738 aa16.12■□□□□ 0.17
SMPD3-211ENST00000568373 INMT-MINDY4F8WBC2 141 aa16.12■□□□□ 0.17
SMPD3-211ENST00000568373 EIF1AYO14602 144 aaKnown RBP16.12■□□□□ 0.17
SMPD3-211ENST00000568373 ACHEP22303 614 aa16.12■□□□□ 0.17
SMPD3-211ENST00000568373 PTH2RP49190 550 aa16.12■□□□□ 0.17
SMPD3-211ENST00000568373 MMP16P51512 607 aa16.12■□□□□ 0.17
SMPD3-211ENST00000568373 MFAP5Q13361 173 aa16.12■□□□□ 0.17
SMPD3-211ENST00000568373 KCNJ8Q15842 424 aa16.12■□□□□ 0.17
SMPD3-211ENST00000568373 TMEM69Q5SWH9 247 aa16.12■□□□□ 0.17
SMPD3-211ENST00000568373 ZNF704Q6ZNC4 412 aaPredicted RBP16.12■□□□□ 0.17
SMPD3-211ENST00000568373 SEC61A2Q9H9S3 476 aa16.12■□□□□ 0.17
SMPD3-211ENST00000568373 P4HTMQ9NXG6 502 aa16.12■□□□□ 0.17
SMPD3-211ENST00000568373 CKLFQ9UBR5 152 aa16.12■□□□□ 0.17
SMPD3-211ENST00000568373 ZNF318Q5VUA4 2279 aa16.12■□□□□ 0.17
SMPD3-211ENST00000568373 AHCTF1Q8WYP5 2266 aa16.12■□□□□ 0.17
SMPD3-211ENST00000568373 LOC107986453A0A1B0GWG9 222 aa16.12■□□□□ 0.17
SMPD3-211ENST00000568373 A0A1W2PNU3 283 aaPredicted RBP16.12■□□□□ 0.17
SMPD3-211ENST00000568373 SULT1B1O43704 296 aa16.12■□□□□ 0.17
SMPD3-211ENST00000568373 EIF1BO60739 113 aaKnown RBP16.12■□□□□ 0.17
SMPD3-211ENST00000568373 P04436 131 aa16.12■□□□□ 0.17
SMPD3-211ENST00000568373 SERPINA7P05543 415 aa16.12■□□□□ 0.17
SMPD3-211ENST00000568373 FSTP19883 344 aa16.12■□□□□ 0.17
SMPD3-211ENST00000568373 EIF1AXP47813 144 aaKnown RBP16.12■□□□□ 0.17
SMPD3-211ENST00000568373 MTFR2Q6P444 385 aa16.12■□□□□ 0.17
SMPD3-211ENST00000568373 PLEKHA1Q9HB21 404 aa16.12■□□□□ 0.17
SMPD3-211ENST00000568373 FOXJ2Q9P0K8 574 aa16.12■□□□□ 0.17
SMPD3-211ENST00000568373 LHFPL6Q9Y693 200 aa16.12■□□□□ 0.17
SMPD3-211ENST00000568373 PCSK5Q92824 1860 aa16.11■□□□□ 0.17
SMPD3-211ENST00000568373 A8MV72 311 aaPredicted RBP16.11■□□□□ 0.17
SMPD3-211ENST00000568373 GABARAPH6UMI1 98 aa16.11■□□□□ 0.17
SMPD3-211ENST00000568373 ITGA5P08648 1049 aa16.11■□□□□ 0.17
SMPD3-211ENST00000568373 UBCP0CG48 685 aaKnown RBP16.11■□□□□ 0.17
SMPD3-211ENST00000568373 CDK2P24941 298 aa16.11■□□□□ 0.17
SMPD3-211ENST00000568373 DCTDP32321 178 aa16.11■□□□□ 0.17
SMPD3-211ENST00000568373 GDNFP39905 211 aa16.11■□□□□ 0.17
SMPD3-211ENST00000568373 MNDAP41218 407 aa16.11■□□□□ 0.17
SMPD3-211ENST00000568373 DNASE1L1P49184 302 aa16.11■□□□□ 0.17
SMPD3-211ENST00000568373 NKX2-5P52952 324 aaPredicted RBP16.11■□□□□ 0.17
SMPD3-211ENST00000568373 CLDN17P56750 224 aa16.11■□□□□ 0.17
SMPD3-211ENST00000568373 KLF9Q13886 244 aaPredicted RBP16.11■□□□□ 0.17
SMPD3-211ENST00000568373 ACER2Q5QJU3 275 aa16.11■□□□□ 0.17
SMPD3-211ENST00000568373 BCL2L15Q5TBC7 163 aa16.11■□□□□ 0.17
SMPD3-211ENST00000568373 TMEM244Q5VVB8 128 aa16.11■□□□□ 0.17
SMPD3-211ENST00000568373 ESX1Q8N693 406 aa16.11■□□□□ 0.17
SMPD3-211ENST00000568373 OR10S1Q8NGN2 331 aa16.11■□□□□ 0.17
SMPD3-211ENST00000568373 OR13C3Q8NGS6 347 aa16.11■□□□□ 0.17
SMPD3-211ENST00000568373 PIGQQ9BRB3 760 aa16.11■□□□□ 0.17
SMPD3-211ENST00000568373 C7orf50Q9BRJ6 194 aaKnown RBP16.11■□□□□ 0.17
SMPD3-211ENST00000568373 DPAGT1Q9H3H5 408 aa16.11■□□□□ 0.17
SMPD3-211ENST00000568373 EMC7Q9NPA0 242 aa16.11■□□□□ 0.17
SMPD3-211ENST00000568373 FAM206AQ9NX38 181 aa16.11■□□□□ 0.17
SMPD3-211ENST00000568373 GDF2Q9UK05 429 aaPredicted RBP16.11■□□□□ 0.17
SMPD3-211ENST00000568373 POU2F3Q9UKI9 436 aa16.11■□□□□ 0.17
SMPD3-211ENST00000568373 PHF3Q92576 2039 aaKnown RBP16.11■□□□□ 0.17
SMPD3-211ENST00000568373 A0A0G2JMM0 328 aa16.1■□□□□ 0.17
SMPD3-211ENST00000568373 A0A1W2PPB8 328 aa16.1■□□□□ 0.17
SMPD3-211ENST00000568373 A0A1W2PRS3 328 aa16.1■□□□□ 0.17
SMPD3-211ENST00000568373 KIR3DP1A8MWS1 328 aa16.1■□□□□ 0.17
SMPD3-211ENST00000568373 SLC17A2O00624 439 aa16.1■□□□□ 0.17
SMPD3-211ENST00000568373 TLX3O43711 291 aaPredicted RBP16.1■□□□□ 0.17
SMPD3-211ENST00000568373 QDPRP09417 244 aa16.1■□□□□ 0.17
SMPD3-211ENST00000568373 IGFBP3P17936 291 aaPredicted RBP16.1■□□□□ 0.17
SMPD3-211ENST00000568373 CDAP32320 146 aa16.1■□□□□ 0.17
SMPD3-211ENST00000568373 BTG1P62324 171 aa16.1■□□□□ 0.17
SMPD3-211ENST00000568373 RAC1P63000 192 aa16.1■□□□□ 0.17
SMPD3-211ENST00000568373 DYRK1AQ13627 763 aa16.1■□□□□ 0.17
SMPD3-211ENST00000568373 KLHL24Q6TFL4 600 aa16.1■□□□□ 0.17
SMPD3-211ENST00000568373 CFAP77Q6ZQR2 320 aa16.1■□□□□ 0.17
SMPD3-211ENST00000568373 GCDHQ92947 438 aaPredicted RBP16.1■□□□□ 0.17
SMPD3-211ENST00000568373 TAS2R4Q9NYW5 299 aa16.1■□□□□ 0.17
SMPD3-211ENST00000568373 POLR1DQ9Y2S0 133 aa16.1■□□□□ 0.17
SMPD3-211ENST00000568373 CNTRLQ7Z7A1 2325 aa16.1■□□□□ 0.17
SMPD3-211ENST00000568373 KMT2EQ8IZD2 1858 aa16.1■□□□□ 0.17
SMPD3-211ENST00000568373 DOK2O60496 412 aa16.1■□□□□ 0.17
SMPD3-211ENST00000568373 VAMP5O95183 116 aa16.1■□□□□ 0.17
SMPD3-211ENST00000568373 ARSBP15848 533 aa16.1■□□□□ 0.17
SMPD3-211ENST00000568373 CSNK2A1P68400 391 aaPredicted RBP16.1■□□□□ 0.17
SMPD3-211ENST00000568373 MRPS10P82664 201 aaKnown RBP16.1■□□□□ 0.17
SMPD3-211ENST00000568373 RAB11BQ15907 218 aa16.1■□□□□ 0.17
SMPD3-211ENST00000568373 TMEM164Q5U3C3 297 aa16.1■□□□□ 0.17
SMPD3-211ENST00000568373 OR52I2Q8NH67 350 aa16.1■□□□□ 0.17
SMPD3-211ENST00000568373 NEK6Q9HC98 313 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms