RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 P2RY8Q86VZ1 359 aa11.34□□□□□ -0.59
SPG7-209ENST00000564047 SLC35F2Q8IXU6 374 aa11.34□□□□□ -0.59
SPG7-209ENST00000564047 OR10H5Q8NGA6 315 aa11.34□□□□□ -0.59
SPG7-209ENST00000564047 OR4F15Q8NGB8 312 aa11.34□□□□□ -0.59
SPG7-209ENST00000564047 OR2T27Q8NH04 317 aa11.34□□□□□ -0.59
SPG7-209ENST00000564047 BORCS5Q969J3 196 aa11.34□□□□□ -0.59
SPG7-209ENST00000564047 NABP1Q96AH0 204 aa11.34□□□□□ -0.59
SPG7-209ENST00000564047 JAM3Q9BX67 310 aa11.34□□□□□ -0.59
SPG7-209ENST00000564047 OPN3Q9H1Y3 402 aaPredicted RBP11.34□□□□□ -0.59
SPG7-209ENST00000564047 WDR76Q9H967 626 aa11.34□□□□□ -0.59
SPG7-209ENST00000564047 SIAEQ9HAT2 523 aa11.34□□□□□ -0.59
SPG7-209ENST00000564047 DIMT1Q9UNQ2 313 aaKnown RBP11.34□□□□□ -0.59
SPG7-209ENST00000564047 F8P00451 2351 aa11.34□□□□□ -0.59
SPG7-209ENST00000564047 APCP25054 2843 aa11.33□□□□□ -0.6
SPG7-209ENST00000564047 ZNF593O00488 134 aaPredicted RBP11.33□□□□□ -0.6
SPG7-209ENST00000564047 TMCC2O75069 709 aa11.33□□□□□ -0.6
SPG7-209ENST00000564047 CLPXO76031 633 aa11.33□□□□□ -0.6
SPG7-209ENST00000564047 ITGA5P08648 1049 aa11.33□□□□□ -0.6
SPG7-209ENST00000564047 COX5AP20674 150 aa11.33□□□□□ -0.6
SPG7-209ENST00000564047 BMP5P22003 454 aa11.33□□□□□ -0.6
SPG7-209ENST00000564047 COL8A1P27658 744 aa11.33□□□□□ -0.6
SPG7-209ENST00000564047 NAA10P41227 235 aaPredicted RBP11.33□□□□□ -0.6
SPG7-209ENST00000564047 MAP2K4P45985 399 aa11.33□□□□□ -0.6
SPG7-209ENST00000564047 FOXG1P55316 489 aaPredicted RBP11.33□□□□□ -0.6
SPG7-209ENST00000564047 ARF1P84077 181 aaKnown RBP11.33□□□□□ -0.6
SPG7-209ENST00000564047 AQP6Q13520 282 aa11.33□□□□□ -0.6
SPG7-209ENST00000564047 IRF3Q14653 427 aa11.33□□□□□ -0.6
SPG7-209ENST00000564047 P2RY6Q15077 328 aa11.33□□□□□ -0.6
SPG7-209ENST00000564047 SGCAQ16586 387 aa11.33□□□□□ -0.6
SPG7-209ENST00000564047 MEP1BQ16820 701 aa11.33□□□□□ -0.6
SPG7-209ENST00000564047 ZNF829Q3KNS6 432 aaPredicted RBP11.33□□□□□ -0.6
SPG7-209ENST00000564047 RNLSQ5VYX0 342 aa11.33□□□□□ -0.6
SPG7-209ENST00000564047 MTFR2Q6P444 385 aa11.33□□□□□ -0.6
SPG7-209ENST00000564047 ZNF813Q6ZN06 617 aa11.33□□□□□ -0.6
SPG7-209ENST00000564047 SHFQ7M4L6 423 aa11.33□□□□□ -0.6
SPG7-209ENST00000564047 MRGPRGQ86SM5 289 aa11.33□□□□□ -0.6
SPG7-209ENST00000564047 CDC20BQ86Y33 519 aa11.33□□□□□ -0.6
SPG7-209ENST00000564047 GABRG1Q8N1C3 465 aa11.33□□□□□ -0.6
SPG7-209ENST00000564047 SLC22A24Q8N4F4 322 aa11.33□□□□□ -0.6
SPG7-209ENST00000564047 ACBD7Q8N6N7 88 aa11.33□□□□□ -0.6
SPG7-209ENST00000564047 OR6N2Q8NGY6 317 aa11.33□□□□□ -0.6
SPG7-209ENST00000564047 BOD1Q96IK1 185 aa11.33□□□□□ -0.6
SPG7-209ENST00000564047 WACQ9BTA9 647 aa11.33□□□□□ -0.6
SPG7-209ENST00000564047 INPP5EQ9NRR6 644 aa11.33□□□□□ -0.6
SPG7-209ENST00000564047 TAS2R16Q9NYV7 291 aa11.33□□□□□ -0.6
SPG7-209ENST00000564047 EXOSC1Q9Y3B2 195 aaKnown RBP11.33□□□□□ -0.6
SPG7-209ENST00000564047 TMEM14AQ9Y6G1 99 aa11.33□□□□□ -0.6
SPG7-209ENST00000564047 GTF3C1Q12789 2109 aa11.33□□□□□ -0.6
SPG7-209ENST00000564047 C12orf71A8MTZ7 269 aa11.32□□□□□ -0.6
SPG7-209ENST00000564047 A8MXE2 369 aa11.32□□□□□ -0.6
SPG7-209ENST00000564047 ZNF670-ZNF695F2Z2N8 137 aa11.32□□□□□ -0.6
SPG7-209ENST00000564047 FARS2O95363 451 aaKnown RBP11.32□□□□□ -0.6
SPG7-209ENST00000564047 CST2P09228 141 aa11.32□□□□□ -0.6
SPG7-209ENST00000564047 SPARCP09486 303 aa11.32□□□□□ -0.6
SPG7-209ENST00000564047 OR8G3PP0DMU2 310 aa11.32□□□□□ -0.6
SPG7-209ENST00000564047 ZNF182P17025 639 aaPredicted RBP11.32□□□□□ -0.6
SPG7-209ENST00000564047 IGHV1-2P23083 117 aa11.32□□□□□ -0.6
SPG7-209ENST00000564047 PSMB9P28065 219 aa11.32□□□□□ -0.6
SPG7-209ENST00000564047 C21orf33P30042 268 aaPredicted RBP11.32□□□□□ -0.6
SPG7-209ENST00000564047 TGFBR3Q03167 851 aa11.32□□□□□ -0.6
SPG7-209ENST00000564047 ENDOGQ14249 297 aaKnown RBP11.32□□□□□ -0.6
SPG7-209ENST00000564047 ANKRD16Q6P6B7 361 aa11.32□□□□□ -0.6
SPG7-209ENST00000564047 DPY19L4Q7Z388 723 aa11.32□□□□□ -0.6
SPG7-209ENST00000564047 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.32□□□□□ -0.6
SPG7-209ENST00000564047 FJX1Q86VR8 437 aa11.32□□□□□ -0.6
SPG7-209ENST00000564047 LIX1LQ8IVB5 337 aa11.32□□□□□ -0.6
SPG7-209ENST00000564047 ZNF454Q8N9F8 522 aa11.32□□□□□ -0.6
SPG7-209ENST00000564047 C1orf162Q8NEQ5 155 aaPredicted RBP11.32□□□□□ -0.6
SPG7-209ENST00000564047 OR10H4Q8NGA5 316 aa11.32□□□□□ -0.6
SPG7-209ENST00000564047 OR1K1Q8NGR3 316 aa11.32□□□□□ -0.6
SPG7-209ENST00000564047 OTOSQ8NHW6 89 aa11.32□□□□□ -0.6
SPG7-209ENST00000564047 PRR7Q8TB68 274 aa11.32□□□□□ -0.6
SPG7-209ENST00000564047 ASB5Q8WWX0 329 aa11.32□□□□□ -0.6
SPG7-209ENST00000564047 CDADC1Q9BWV3 514 aa11.32□□□□□ -0.6
SPG7-209ENST00000564047 CDCA4Q9BXL8 241 aa11.32□□□□□ -0.6
SPG7-209ENST00000564047 EMC7Q9NPA0 242 aa11.32□□□□□ -0.6
SPG7-209ENST00000564047 COQ3Q9NZJ6 369 aa11.32□□□□□ -0.6
SPG7-209ENST00000564047 JKAMPQ9P055 326 aa11.32□□□□□ -0.6
SPG7-209ENST00000564047 CYB5R1Q9UHQ9 305 aa11.32□□□□□ -0.6
SPG7-209ENST00000564047 SVILO95425 2214 aa11.31□□□□□ -0.6
SPG7-209ENST00000564047 PDZD2O15018 2839 aa11.31□□□□□ -0.6
SPG7-209ENST00000564047 DAPL1A0PJW8 107 aa11.31□□□□□ -0.6
SPG7-209ENST00000564047 PHYHO14832 338 aa11.31□□□□□ -0.6
SPG7-209ENST00000564047 LRRTM2O43300 516 aa11.31□□□□□ -0.6
SPG7-209ENST00000564047 ADRA2AP08913 450 aa11.31□□□□□ -0.6
SPG7-209ENST00000564047 RNF224P0DH78 156 aa11.31□□□□□ -0.6
SPG7-209ENST00000564047 B4GALT1P15291 398 aa11.31□□□□□ -0.6
SPG7-209ENST00000564047 MYL12AP19105 171 aa11.31□□□□□ -0.6
SPG7-209ENST00000564047 ALOX5APP20292 161 aa11.31□□□□□ -0.6
SPG7-209ENST00000564047 CHRNB4P30926 498 aa11.31□□□□□ -0.6
SPG7-209ENST00000564047 UGT2B10P36537 528 aa11.31□□□□□ -0.6
SPG7-209ENST00000564047 TGFBR2P37173 567 aa11.31□□□□□ -0.6
SPG7-209ENST00000564047 SERPINB10P48595 397 aa11.31□□□□□ -0.6
SPG7-209ENST00000564047 SPCS2Q15005 226 aa11.31□□□□□ -0.6
SPG7-209ENST00000564047 C9orf135Q5VTT2 229 aa11.31□□□□□ -0.6
SPG7-209ENST00000564047 OTPQ5XKR4 325 aa11.31□□□□□ -0.6
SPG7-209ENST00000564047 SLC18B1Q6NT16 456 aa11.31□□□□□ -0.6
SPG7-209ENST00000564047 ZNF474Q6S9Z5 364 aaPredicted RBP11.31□□□□□ -0.6
SPG7-209ENST00000564047 KLHL24Q6TFL4 600 aa11.31□□□□□ -0.6
SPG7-209ENST00000564047 ZNF367Q7RTV3 350 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms