RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-204ENST00000554062 ECH1Q13011 328 aa3.41□□□□□ -1.86
PABPN1-204ENST00000554062 PRPSAP1Q14558 356 aa3.41□□□□□ -1.86
PABPN1-204ENST00000554062 CLINT1Q14677 625 aa3.41□□□□□ -1.86
PABPN1-204ENST00000554062 RAB11BQ15907 218 aa3.41□□□□□ -1.86
PABPN1-204ENST00000554062 NKAIN1Q4KMZ8 207 aa3.41□□□□□ -1.86
PABPN1-204ENST00000554062 ANKRD26P1Q6NSI1 321 aa3.41□□□□□ -1.86
PABPN1-204ENST00000554062 C1orf94Q6P1W5 598 aa3.41□□□□□ -1.86
PABPN1-204ENST00000554062 RNF165Q6ZSG1 346 aa3.41□□□□□ -1.86
PABPN1-204ENST00000554062 Q6ZSR3 168 aa3.41□□□□□ -1.86
PABPN1-204ENST00000554062 APRG1Q8IVJ8 170 aa3.41□□□□□ -1.86
PABPN1-204ENST00000554062 PUSL1Q8N0Z8 303 aaKnown RBP3.41□□□□□ -1.86
PABPN1-204ENST00000554062 FBXL16Q8N461 479 aa3.41□□□□□ -1.86
PABPN1-204ENST00000554062 CD177Q8N6Q3 437 aa3.41□□□□□ -1.86
PABPN1-204ENST00000554062 FBXL13Q8NEE6 735 aa3.41□□□□□ -1.86
PABPN1-204ENST00000554062 NEIL3Q8TAT5 605 aa3.41□□□□□ -1.86
PABPN1-204ENST00000554062 MARCH1Q8TCQ1 289 aa3.41□□□□□ -1.86
PABPN1-204ENST00000554062 SLC7A13Q8TCU3 470 aa3.41□□□□□ -1.86
PABPN1-204ENST00000554062 C7orf33Q8WU49 177 aa3.41□□□□□ -1.86
PABPN1-204ENST00000554062 FCRL1Q96LA6 429 aa3.41□□□□□ -1.86
PABPN1-204ENST00000554062 TSG101Q99816 390 aa3.41□□□□□ -1.86
PABPN1-204ENST00000554062 OR51M1Q9H341 326 aa3.41□□□□□ -1.86
PABPN1-204ENST00000554062 SRMSQ9H3Y6 488 aa3.41□□□□□ -1.86
PABPN1-204ENST00000554062 CCDC59Q9P031 241 aaKnown RBP3.41□□□□□ -1.86
PABPN1-204ENST00000554062 XCL2Q9UBD3 114 aa3.41□□□□□ -1.86
PABPN1-204ENST00000554062 LGALS13Q9UHV8 139 aa3.41□□□□□ -1.86
PABPN1-204ENST00000554062 TRMT112Q9UI30 125 aaKnown RBP3.41□□□□□ -1.86
PABPN1-204ENST00000554062 ING4Q9UNL4 249 aa3.41□□□□□ -1.86
PABPN1-204ENST00000554062 NEUROG3Q9Y4Z2 214 aa3.41□□□□□ -1.86
PABPN1-204ENST00000554062 ECM29Q5VYK3 1845 aa3.41□□□□□ -1.86
PABPN1-204ENST00000554062 PRUNE2Q8WUY3 3088 aa3.41□□□□□ -1.86
PABPN1-204ENST00000554062 KIAA0100Q14667 2235 aaKnown RBP3.4□□□□□ -1.86
PABPN1-204ENST00000554062 GON4LQ3T8J9 2241 aa3.4□□□□□ -1.86
PABPN1-204ENST00000554062 CNTNAP1P78357 1384 aa3.4□□□□□ -1.86
PABPN1-204ENST00000554062 MED23Q9ULK4 1368 aa3.4□□□□□ -1.86
PABPN1-204ENST00000554062 UNC80Q8N2C7 3258 aa3.4□□□□□ -1.86
PABPN1-204ENST00000554062 SPEF2Q9C093 1822 aa3.4□□□□□ -1.86
PABPN1-204ENST00000554062 A0A0J9YYE9 177 aa3.4□□□□□ -1.87
PABPN1-204ENST00000554062 GLYATL1P3A0A0U1RQE8 302 aa3.4□□□□□ -1.87
PABPN1-204ENST00000554062 A0A1W2PQ72 361 aa3.4□□□□□ -1.87
PABPN1-204ENST00000554062 A0A1W2PRD5 423 aa3.4□□□□□ -1.87
PABPN1-204ENST00000554062 RBMY1BA6NDE4 496 aaKnown RBP3.4□□□□□ -1.87
PABPN1-204ENST00000554062 RBMY1EA6NEQ0 496 aaKnown RBP3.4□□□□□ -1.87
PABPN1-204ENST00000554062 H3BNH8 94 aa3.4□□□□□ -1.87
PABPN1-204ENST00000554062 M0R3G1 203 aa3.4□□□□□ -1.87
PABPN1-204ENST00000554062 CEP290O15078 2479 aa3.4□□□□□ -1.87
PABPN1-204ENST00000554062 FAM189A1O60320 539 aa3.4□□□□□ -1.87
PABPN1-204ENST00000554062 TRBC1P01850 177 aa3.4□□□□□ -1.87
PABPN1-204ENST00000554062 RBMY1DP0C7P1 496 aaKnown RBP3.4□□□□□ -1.87
PABPN1-204ENST00000554062 RBMY1A1P0DJD3 496 aaKnown RBP3.4□□□□□ -1.87
PABPN1-204ENST00000554062 GATA2P23769 480 aaPredicted RBP3.4□□□□□ -1.87
PABPN1-204ENST00000554062 SLC26A3P40879 764 aa3.4□□□□□ -1.87
PABPN1-204ENST00000554062 CST9Q5W186 159 aa3.4□□□□□ -1.87
PABPN1-204ENST00000554062 ZNF836Q6ZNA1 936 aa3.4□□□□□ -1.87
PABPN1-204ENST00000554062 ZNF620Q6ZNG0 422 aa3.4□□□□□ -1.87
PABPN1-204ENST00000554062 USP50Q70EL3 339 aaPredicted RBP3.4□□□□□ -1.87
PABPN1-204ENST00000554062 CMC1Q7Z7K0 106 aa3.4□□□□□ -1.87
PABPN1-204ENST00000554062 LINC00523Q86TU6 105 aa3.4□□□□□ -1.87
PABPN1-204ENST00000554062 FBXO16Q8IX29 292 aaPredicted RBP3.4□□□□□ -1.87
PABPN1-204ENST00000554062 PRR22Q8IZ63 422 aa3.4□□□□□ -1.87
PABPN1-204ENST00000554062 ZNF740Q8NDX6 193 aa3.4□□□□□ -1.87
PABPN1-204ENST00000554062 SDR42E1Q8WUS8 393 aa3.4□□□□□ -1.87
PABPN1-204ENST00000554062 ARAP2Q8WZ64 1704 aa3.4□□□□□ -1.87
PABPN1-204ENST00000554062 MARC2Q969Z3 335 aa3.4□□□□□ -1.87
PABPN1-204ENST00000554062 OPALINQ96PE5 141 aa3.4□□□□□ -1.87
PABPN1-204ENST00000554062 LZTS2Q9BRK4 669 aa3.4□□□□□ -1.87
PABPN1-204ENST00000554062 ZYG11BQ9C0D3 744 aa3.4□□□□□ -1.87
PABPN1-204ENST00000554062 DEFB127Q9H1M4 99 aa3.4□□□□□ -1.87
PABPN1-204ENST00000554062 OR51J1Q9H342 316 aa3.4□□□□□ -1.87
PABPN1-204ENST00000554062 RNF167Q9H6Y7 350 aa3.4□□□□□ -1.87
PABPN1-204ENST00000554062 FGF20Q9NP95 211 aaPredicted RBP3.4□□□□□ -1.87
PABPN1-204ENST00000554062 TNFRSF19Q9NS68 423 aa3.4□□□□□ -1.87
PABPN1-204ENST00000554062 NUFIP1Q9UHK0 495 aaKnown RBP3.4□□□□□ -1.87
PABPN1-204ENST00000554062 MMP24Q9Y5R2 645 aa3.4□□□□□ -1.87
PABPN1-204ENST00000554062 A0A0J9YXY3 114 aa3.39□□□□□ -1.87
PABPN1-204ENST00000554062 ZFP92A6NM28 416 aa3.39□□□□□ -1.87
PABPN1-204ENST00000554062 USP27XA6NNY8 438 aa3.39□□□□□ -1.87
PABPN1-204ENST00000554062 CRLF1O75462 422 aa3.39□□□□□ -1.87
PABPN1-204ENST00000554062 TSPAN13O95857 204 aa3.39□□□□□ -1.87
PABPN1-204ENST00000554062 SNAI1O95863 264 aaPredicted RBP3.39□□□□□ -1.87
PABPN1-204ENST00000554062 HLA-HP01893 362 aa3.39□□□□□ -1.87
PABPN1-204ENST00000554062 GKN3PP0CG01 181 aa3.39□□□□□ -1.87
PABPN1-204ENST00000554062 BCKDHBP21953 392 aa3.39□□□□□ -1.87
PABPN1-204ENST00000554062 RPS12P25398 132 aaKnown RBP3.39□□□□□ -1.87
PABPN1-204ENST00000554062 DCKP27707 260 aa3.39□□□□□ -1.87
PABPN1-204ENST00000554062 SERPINB5P36952 375 aa3.39□□□□□ -1.87
PABPN1-204ENST00000554062 RPS5P46782 204 aaKnown RBP3.39□□□□□ -1.87
PABPN1-204ENST00000554062 APOC4P55056 127 aa3.39□□□□□ -1.87
PABPN1-204ENST00000554062 DAOAP59103 153 aa3.39□□□□□ -1.87
PABPN1-204ENST00000554062 EIF3EP60228 445 aaKnown RBP3.39□□□□□ -1.87
PABPN1-204ENST00000554062 FKBP1AP62942 108 aaKnown RBP3.39□□□□□ -1.87
PABPN1-204ENST00000554062 GPNMBQ14956 572 aa3.39□□□□□ -1.87
PABPN1-204ENST00000554062 LRRC10Q5BKY1 277 aa3.39□□□□□ -1.87
PABPN1-204ENST00000554062 ZNF774Q6NX45 483 aa3.39□□□□□ -1.87
PABPN1-204ENST00000554062 CNIH2Q6PI25 160 aa3.39□□□□□ -1.87
PABPN1-204ENST00000554062 TMEM179Q6ZVK1 233 aa3.39□□□□□ -1.87
PABPN1-204ENST00000554062 PNKDQ8N490 385 aa3.39□□□□□ -1.87
PABPN1-204ENST00000554062 ZNF321PQ8N8H1 164 aa3.39□□□□□ -1.87
PABPN1-204ENST00000554062 OR9G4Q8NGQ1 327 aa3.39□□□□□ -1.87
PABPN1-204ENST00000554062 OR2G3Q8NGZ4 309 aa3.39□□□□□ -1.87
PABPN1-204ENST00000554062 ZNF502Q8TBZ5 544 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms