RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 FAAP20Q6NZ36 180 aa14.54□□□□□ -0.08
COL4A1-204ENST00000543140 OR51A2Q8NGJ7 313 aa14.54□□□□□ -0.08
COL4A1-204ENST00000543140 SLAMF6Q96DU3 332 aa14.54□□□□□ -0.08
COL4A1-204ENST00000543140 PROK2Q9HC23 129 aa14.54□□□□□ -0.08
COL4A1-204ENST00000543140 KLHL13Q9P2N7 655 aa14.54□□□□□ -0.08
COL4A1-204ENST00000543140 CKLFQ9UBR5 152 aa14.54□□□□□ -0.08
COL4A1-204ENST00000543140 RTTNQ86VV8 2226 aa14.53□□□□□ -0.08
COL4A1-204ENST00000543140 DCDC2BA2VCK2 349 aa14.53□□□□□ -0.08
COL4A1-204ENST00000543140 TMEM127O75204 238 aa14.53□□□□□ -0.08
COL4A1-204ENST00000543140 IGHG1P01857 330 aa14.53□□□□□ -0.08
COL4A1-204ENST00000543140 ZNF43P17038 809 aa14.53□□□□□ -0.08
COL4A1-204ENST00000543140 LAP3P28838 519 aa14.53□□□□□ -0.08
COL4A1-204ENST00000543140 RAB11BQ15907 218 aa14.53□□□□□ -0.08
COL4A1-204ENST00000543140 C2orf76Q3KRA6 126 aa14.53□□□□□ -0.08
COL4A1-204ENST00000543140 THEM4Q5T1C6 240 aa14.53□□□□□ -0.08
COL4A1-204ENST00000543140 DCAF12Q5T6F0 453 aa14.53□□□□□ -0.08
COL4A1-204ENST00000543140 BEST4Q8NFU0 473 aa14.53□□□□□ -0.08
COL4A1-204ENST00000543140 DACT3Q96B18 629 aaPredicted RBP14.53□□□□□ -0.08
COL4A1-204ENST00000543140 GAL3ST1Q99999 423 aa14.53□□□□□ -0.08
COL4A1-204ENST00000543140 HRASLSQ9HDD0 168 aa14.53□□□□□ -0.08
COL4A1-204ENST00000543140 ING3Q9NXR8 418 aa14.53□□□□□ -0.08
COL4A1-204ENST00000543140 CGGBP1Q9UFW8 167 aaPredicted RBP14.53□□□□□ -0.08
COL4A1-204ENST00000543140 CDV3Q9UKY7 258 aaKnown RBP14.53□□□□□ -0.08
COL4A1-204ENST00000543140 HHLA2Q9UM44 414 aa14.53□□□□□ -0.08
COL4A1-204ENST00000543140 HRGP04196 525 aa14.53□□□□□ -0.08
COL4A1-204ENST00000543140 ACP1P24666 158 aa14.53□□□□□ -0.08
COL4A1-204ENST00000543140 DNASE1L1P49184 302 aa14.53□□□□□ -0.08
COL4A1-204ENST00000543140 SPOCK1Q08629 439 aa14.53□□□□□ -0.08
COL4A1-204ENST00000543140 DYRK1AQ13627 763 aa14.53□□□□□ -0.08
COL4A1-204ENST00000543140 FCN2Q15485 313 aa14.53□□□□□ -0.08
COL4A1-204ENST00000543140 C6orf183Q5T699 404 aa14.53□□□□□ -0.08
COL4A1-204ENST00000543140 RAET1LQ5VY80 246 aa14.53□□□□□ -0.08
COL4A1-204ENST00000543140 NOXO1Q8NFA2 376 aa14.53□□□□□ -0.08
COL4A1-204ENST00000543140 OR1J4Q8NGS1 313 aa14.53□□□□□ -0.08
COL4A1-204ENST00000543140 RNF133Q8WVZ7 376 aa14.53□□□□□ -0.08
COL4A1-204ENST00000543140 THRSPQ92748 146 aa14.53□□□□□ -0.08
COL4A1-204ENST00000543140 FAM3DQ96BQ1 224 aa14.53□□□□□ -0.08
COL4A1-204ENST00000543140 MED28Q9H204 178 aa14.53□□□□□ -0.08
COL4A1-204ENST00000543140 MYEF2Q9P2K5 600 aaKnown RBP14.53□□□□□ -0.08
COL4A1-204ENST00000543140 CYB5R1Q9UHQ9 305 aa14.53□□□□□ -0.08
COL4A1-204ENST00000543140 POLR1DQ9Y2S0 133 aa14.53□□□□□ -0.08
COL4A1-204ENST00000543140 LOXL2Q9Y4K0 774 aa14.53□□□□□ -0.08
COL4A1-204ENST00000543140 AHCTF1Q8WYP5 2266 aa14.53□□□□□ -0.08
COL4A1-204ENST00000543140 IGHV3-15A0A0B4J1V0 119 aa14.52□□□□□ -0.08
COL4A1-204ENST00000543140 KDM4BO94953 1096 aa14.52□□□□□ -0.08
COL4A1-204ENST00000543140 YES1P07947 543 aa14.52□□□□□ -0.08
COL4A1-204ENST00000543140 TCN2P20062 427 aa14.52□□□□□ -0.08
COL4A1-204ENST00000543140 DCTDP32321 178 aa14.52□□□□□ -0.08
COL4A1-204ENST00000543140 TOMM20Q15388 145 aa14.52□□□□□ -0.08
COL4A1-204ENST00000543140 GLYATL3Q5SZD4 288 aa14.52□□□□□ -0.08
COL4A1-204ENST00000543140 CFAP77Q6ZQR2 320 aa14.52□□□□□ -0.08
COL4A1-204ENST00000543140 BIVMQ86UB2 503 aa14.52□□□□□ -0.08
COL4A1-204ENST00000543140 TCTE3Q8IZS6 198 aa14.52□□□□□ -0.08
COL4A1-204ENST00000543140 OR10S1Q8NGN2 331 aa14.52□□□□□ -0.08
COL4A1-204ENST00000543140 SLC25A43Q8WUT9 341 aaPredicted RBP14.52□□□□□ -0.08
COL4A1-204ENST00000543140 ZBTB8AQ96BR9 441 aa14.52□□□□□ -0.08
COL4A1-204ENST00000543140 SCMH1Q96GD3 660 aa14.52□□□□□ -0.08
COL4A1-204ENST00000543140 OXGR1Q96P68 337 aa14.52□□□□□ -0.08
COL4A1-204ENST00000543140 ANGPTL4Q9BY76 406 aa14.52□□□□□ -0.08
COL4A1-204ENST00000543140 PLEKHA1Q9HB21 404 aa14.52□□□□□ -0.08
COL4A1-204ENST00000543140 HPF1Q9NWY4 346 aa14.52□□□□□ -0.08
COL4A1-204ENST00000543140 FBXO4Q9UKT5 387 aa14.52□□□□□ -0.08
COL4A1-204ENST00000543140 FLVCR2Q9UPI3 526 aa14.52□□□□□ -0.08
COL4A1-204ENST00000543140 SLC17A2O00624 439 aa14.52□□□□□ -0.09
COL4A1-204ENST00000543140 SULT1B1O43704 296 aa14.52□□□□□ -0.09
COL4A1-204ENST00000543140 GLSO94925 669 aaPredicted RBP14.52□□□□□ -0.09
COL4A1-204ENST00000543140 FCER2P06734 321 aa14.52□□□□□ -0.09
COL4A1-204ENST00000543140 GP1BAP07359 652 aa14.52□□□□□ -0.09
COL4A1-204ENST00000543140 H2AFB2P0C5Z0 115 aa14.52□□□□□ -0.09
COL4A1-204ENST00000543140 ADH6P28332 368 aa14.52□□□□□ -0.09
COL4A1-204ENST00000543140 TMPPEQ6ZT21 453 aa14.52□□□□□ -0.09
COL4A1-204ENST00000543140 GTPBP8Q8N3Z3 284 aaPredicted RBP14.52□□□□□ -0.09
COL4A1-204ENST00000543140 PHF21AQ96BD5 680 aa14.52□□□□□ -0.09
COL4A1-204ENST00000543140 C7orf50Q9BRJ6 194 aaKnown RBP14.52□□□□□ -0.09
COL4A1-204ENST00000543140 GHITMQ9H3K2 345 aa14.52□□□□□ -0.09
COL4A1-204ENST00000543140 AKAP7Q9P0M2 348 aaPredicted RBP14.52□□□□□ -0.09
COL4A1-204ENST00000543140 RABL2AQ9UBK7 228 aaPredicted RBP14.52□□□□□ -0.09
COL4A1-204ENST00000543140 PADI1Q9ULC6 663 aa14.52□□□□□ -0.09
COL4A1-204ENST00000543140 RABL2BQ9UNT1 228 aa14.52□□□□□ -0.09
COL4A1-204ENST00000543140 HDGFL3Q9Y3E1 203 aa14.52□□□□□ -0.09
COL4A1-204ENST00000543140 KNTC1P50748 2209 aa14.51□□□□□ -0.09
COL4A1-204ENST00000543140 CTAG2O75638 210 aa14.51□□□□□ -0.09
COL4A1-204ENST00000543140 LIFP15018 202 aa14.51□□□□□ -0.09
COL4A1-204ENST00000543140 CLDN17P56750 224 aa14.51□□□□□ -0.09
COL4A1-204ENST00000543140 MLF1P58340 268 aa14.51□□□□□ -0.09
COL4A1-204ENST00000543140 HYAL4Q2M3T9 481 aa14.51□□□□□ -0.09
COL4A1-204ENST00000543140 ADPRHL1Q8NDY3 354 aa14.51□□□□□ -0.09
COL4A1-204ENST00000543140 COPZ2Q9P299 210 aa14.51□□□□□ -0.09
COL4A1-204ENST00000543140 PISDQ9UG56 409 aa14.51□□□□□ -0.09
COL4A1-204ENST00000543140 LHFPL6Q9Y693 200 aa14.51□□□□□ -0.09
COL4A1-204ENST00000543140 LNP1A1A4G5 178 aa14.51□□□□□ -0.09
COL4A1-204ENST00000543140 AQP7P3A6NL99 342 aa14.51□□□□□ -0.09
COL4A1-204ENST00000543140 ZNF726A6NNF4 738 aa14.51□□□□□ -0.09
COL4A1-204ENST00000543140 XRCC3O43542 346 aa14.51□□□□□ -0.09
COL4A1-204ENST00000543140 ZIC3O60481 467 aa14.51□□□□□ -0.09
COL4A1-204ENST00000543140 QDPRP09417 244 aa14.51□□□□□ -0.09
COL4A1-204ENST00000543140 SLC35A1P78382 337 aa14.51□□□□□ -0.09
COL4A1-204ENST00000543140 CDK10Q15131 360 aa14.51□□□□□ -0.09
COL4A1-204ENST00000543140 B3GNTL1Q67FW5 361 aaPredicted RBP14.51□□□□□ -0.09
COL4A1-204ENST00000543140 BTN2A1Q7KYR7 527 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms