RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, human

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX41-215	ENST00000512431	SCCPDH	Q8NBX0	429 aa		10.46	□□□□□ -0.73
DDX41-215	ENST00000512431	ZNF420	Q8TAQ5	688 aa	Predicted RBP	10.46	□□□□□ -0.73
DDX41-215	ENST00000512431	NSMAF	Q92636	917 aa		10.46	□□□□□ -0.73
DDX41-215	ENST00000512431	CMBL	Q96DG6	245 aa		10.46	□□□□□ -0.73
DDX41-215	ENST00000512431	COG8	Q96MW5	612 aa		10.46	□□□□□ -0.73
DDX41-215	ENST00000512431	SORT1	Q99523	831 aa		10.46	□□□□□ -0.73
DDX41-215	ENST00000512431	OR2H1	Q9GZK4	316 aa		10.46	□□□□□ -0.73
DDX41-215	ENST00000512431	SMURF2	Q9HAU4	748 aa		10.46	□□□□□ -0.73
DDX41-215	ENST00000512431	NDRG4	Q9ULP0	352 aa	Known RBP	10.46	□□□□□ -0.73
DDX41-215	ENST00000512431	CENPVL3	A0A0U1RRI6	287 aa		10.45	□□□□□ -0.74
DDX41-215	ENST00000512431	BTBD17	A6NE02	478 aa		10.45	□□□□□ -0.74
DDX41-215	ENST00000512431		H0YL77	283 aa		10.45	□□□□□ -0.74
DDX41-215	ENST00000512431	KPNA4	O00629	521 aa	Predicted RBP	10.45	□□□□□ -0.74
DDX41-215	ENST00000512431	SDHD	O14521	159 aa		10.45	□□□□□ -0.74
DDX41-215	ENST00000512431	PHYH	O14832	338 aa		10.45	□□□□□ -0.74
DDX41-215	ENST00000512431	TPST2	O60704	377 aa		10.45	□□□□□ -0.74
DDX41-215	ENST00000512431	F13B	P05160	661 aa		10.45	□□□□□ -0.74
DDX41-215	ENST00000512431	FUT4	P22083	530 aa		10.45	□□□□□ -0.74
DDX41-215	ENST00000512431	CFHR2	P36980	270 aa		10.45	□□□□□ -0.74
DDX41-215	ENST00000512431	IER3	P46695	156 aa		10.45	□□□□□ -0.74
DDX41-215	ENST00000512431	SRP9	P49458	86 aa	Known RBP	10.45	□□□□□ -0.74
DDX41-215	ENST00000512431	ZNF133	P52736	654 aa	Predicted RBP	10.45	□□□□□ -0.74
DDX41-215	ENST00000512431	STX3	Q13277	289 aa		10.45	□□□□□ -0.74
DDX41-215	ENST00000512431	ZNF404	Q494X3	552 aa		10.45	□□□□□ -0.74
DDX41-215	ENST00000512431	GCNT6	Q5T4J0	391 aa		10.45	□□□□□ -0.74
DDX41-215	ENST00000512431	FAM27B	Q5VT28	67 aa		10.45	□□□□□ -0.74
DDX41-215	ENST00000512431	WDR25	Q64LD2	544 aa	Predicted RBP	10.45	□□□□□ -0.74
DDX41-215	ENST00000512431	NXN	Q6DKJ4	435 aa		10.45	□□□□□ -0.74
DDX41-215	ENST00000512431	ARMC8	Q8IUR7	673 aa		10.45	□□□□□ -0.74
DDX41-215	ENST00000512431	ASB10	Q8WXI3	467 aa		10.45	□□□□□ -0.74
DDX41-215	ENST00000512431	SGCD	Q92629	289 aa		10.45	□□□□□ -0.74
DDX41-215	ENST00000512431	NABP1	Q96AH0	204 aa		10.45	□□□□□ -0.74
DDX41-215	ENST00000512431	HAVCR1	Q96D42	359 aa		10.45	□□□□□ -0.74
DDX41-215	ENST00000512431	SEPHS2	Q99611	448 aa		10.45	□□□□□ -0.74
DDX41-215	ENST00000512431	WNT5B	Q9H1J7	359 aa		10.45	□□□□□ -0.74
DDX41-215	ENST00000512431	TBCCD1	Q9NVR7	557 aa		10.45	□□□□□ -0.74
DDX41-215	ENST00000512431	PNPO	Q9NVS9	261 aa		10.45	□□□□□ -0.74
DDX41-215	ENST00000512431	LGALS13	Q9UHV8	139 aa		10.45	□□□□□ -0.74
DDX41-215	ENST00000512431	HAO1	Q9UJM8	370 aa		10.45	□□□□□ -0.74
DDX41-215	ENST00000512431	RYR3	Q15413	4870 aa		10.44	□□□□□ -0.74
DDX41-215	ENST00000512431	ZNF816-ZNF321P	A0A0X1KG74	233 aa		10.44	□□□□□ -0.74
DDX41-215	ENST00000512431	TRPC5OS	A6NMA1	111 aa		10.44	□□□□□ -0.74
DDX41-215	ENST00000512431	CPSF4L	A6NMK7	179 aa	Known RBP	10.44	□□□□□ -0.74
DDX41-215	ENST00000512431	ZNF879	B4DU55	563 aa		10.44	□□□□□ -0.74
DDX41-215	ENST00000512431	TYROBP	O43914	113 aa		10.44	□□□□□ -0.74
DDX41-215	ENST00000512431	FSTL3	O95633	263 aa		10.44	□□□□□ -0.74
DDX41-215	ENST00000512431	SFTPB	P07988	381 aa		10.44	□□□□□ -0.74
DDX41-215	ENST00000512431	CST2	P09228	141 aa		10.44	□□□□□ -0.74
DDX41-215	ENST00000512431	ASAH2B	P0C7U1	165 aa		10.44	□□□□□ -0.74
DDX41-215	ENST00000512431	VSIG8	P0DPA2	414 aa		10.44	□□□□□ -0.74
DDX41-215	ENST00000512431	IRF2	P14316	349 aa		10.44	□□□□□ -0.74
DDX41-215	ENST00000512431	SLC6A2	P23975	617 aa		10.44	□□□□□ -0.74
DDX41-215	ENST00000512431	LAP3	P28838	519 aa		10.44	□□□□□ -0.74
DDX41-215	ENST00000512431	EPHA3	P29320	983 aa		10.44	□□□□□ -0.74
DDX41-215	ENST00000512431	NPY4R	P50391	375 aa		10.44	□□□□□ -0.74
DDX41-215	ENST00000512431	POLR2J	P52435	117 aa	Known RBP	10.44	□□□□□ -0.74
DDX41-215	ENST00000512431	GUCY1A3	Q02108	690 aa		10.44	□□□□□ -0.74
DDX41-215	ENST00000512431	CD47	Q08722	323 aa		10.44	□□□□□ -0.74
DDX41-215	ENST00000512431	METTL11B	Q5VVY1	283 aa		10.44	□□□□□ -0.74
DDX41-215	ENST00000512431	DCDC5	Q6ZRR9	648 aa		10.44	□□□□□ -0.74
DDX41-215	ENST00000512431	LDLRAD3	Q86YD5	345 aa		10.44	□□□□□ -0.74
DDX41-215	ENST00000512431	GOLGA6L1	Q8N7Z2	621 aa		10.44	□□□□□ -0.74
DDX41-215	ENST00000512431	PTP4A1	Q93096	173 aa		10.44	□□□□□ -0.74
DDX41-215	ENST00000512431	TECTB	Q96PL2	329 aa		10.44	□□□□□ -0.74
DDX41-215	ENST00000512431	CDADC1	Q9BWV3	514 aa		10.44	□□□□□ -0.74
DDX41-215	ENST00000512431	WDR55	Q9H6Y2	383 aa	Predicted RBP	10.44	□□□□□ -0.74
DDX41-215	ENST00000512431	INIP	Q9NRY2	104 aa		10.44	□□□□□ -0.74
DDX41-215	ENST00000512431	NECAP2	Q9NVZ3	263 aa		10.44	□□□□□ -0.74
DDX41-215	ENST00000512431	FAM96B	Q9Y3D0	163 aa		10.44	□□□□□ -0.74
DDX41-215	ENST00000512431	UGT2A1	Q9Y4X1	527 aa		10.44	□□□□□ -0.74
DDX41-215	ENST00000512431	IGHV1-69D	A0A0B4J2H0	117 aa		10.43	□□□□□ -0.74
DDX41-215	ENST00000512431	C12orf71	A8MTZ7	269 aa		10.43	□□□□□ -0.74
DDX41-215	ENST00000512431	TSPAN9	O75954	239 aa		10.43	□□□□□ -0.74
DDX41-215	ENST00000512431	IGHV1-69	P01742	117 aa		10.43	□□□□□ -0.74
DDX41-215	ENST00000512431	PPIB	P23284	216 aa	Known RBP	10.43	□□□□□ -0.74
DDX41-215	ENST00000512431	TGFBR2	P37173	567 aa		10.43	□□□□□ -0.74
DDX41-215	ENST00000512431	UGT2B15	P54855	530 aa		10.43	□□□□□ -0.74
DDX41-215	ENST00000512431	EGR3	Q06889	387 aa		10.43	□□□□□ -0.74
DDX41-215	ENST00000512431	RPL18	Q07020	188 aa	Known RBP	10.43	□□□□□ -0.74
DDX41-215	ENST00000512431	SCARB2	Q14108	478 aa		10.43	□□□□□ -0.74
DDX41-215	ENST00000512431	ZNF181	Q2M3W8	571 aa		10.43	□□□□□ -0.74
DDX41-215	ENST00000512431	ENTPD8	Q5MY95	495 aa		10.43	□□□□□ -0.74
DDX41-215	ENST00000512431	GALNT4	Q8N4A0	578 aa		10.43	□□□□□ -0.74
DDX41-215	ENST00000512431	PNLDC1	Q8NA58	520 aa	Known RBP	10.43	□□□□□ -0.74
DDX41-215	ENST00000512431	OR13G1	Q8NGZ3	307 aa		10.43	□□□□□ -0.74
DDX41-215	ENST00000512431	FNDC8	Q8TC99	324 aa		10.43	□□□□□ -0.74
DDX41-215	ENST00000512431	GTF2H4	Q92759	462 aa		10.43	□□□□□ -0.74
DDX41-215	ENST00000512431	LHX4	Q969G2	390 aa		10.43	□□□□□ -0.74
DDX41-215	ENST00000512431	MPP4	Q96JB8	637 aa		10.43	□□□□□ -0.74
DDX41-215	ENST00000512431	MEGF10	Q96KG7	1140 aa		10.43	□□□□□ -0.74
DDX41-215	ENST00000512431	WDFY2	Q96P53	400 aa		10.43	□□□□□ -0.74
DDX41-215	ENST00000512431	RBP7	Q96R05	134 aa		10.43	□□□□□ -0.74
DDX41-215	ENST00000512431	ROPN1B	Q9BZX4	212 aa	Predicted RBP	10.43	□□□□□ -0.74
DDX41-215	ENST00000512431	PAIP1	Q9H074	479 aa	Known RBP	10.43	□□□□□ -0.74
DDX41-215	ENST00000512431	ROPN1	Q9HAT0	212 aa	Predicted RBP	10.43	□□□□□ -0.74
DDX41-215	ENST00000512431	ZIM2	Q9NZV7	527 aa		10.43	□□□□□ -0.74
DDX41-215	ENST00000512431	ERVK-18	Q9QC07	812 aa		10.43	□□□□□ -0.74
DDX41-215	ENST00000512431	SLC7A7	Q9UM01	511 aa		10.43	□□□□□ -0.74
DDX41-215	ENST00000512431	CAB39	Q9Y376	341 aa	Predicted RBP	10.43	□□□□□ -0.74
DDX41-215	ENST00000512431		A0A0U1RQK1	487 aa		10.42	□□□□□ -0.74

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