RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 MEPEQ9NQ76 525 aaPredicted RBP7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 A0A1B0GWA3 101 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 CDRT15L2A8MXV6 281 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 C11orf98E9PRG8 122 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 FZD7O75084 574 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 IL33O95760 270 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 WDPCPO95876 746 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 DAOP14920 347 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 CXCR1P25024 350 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 GRPRP30550 384 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 PYCR1P32322 319 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 MAGEB1P43366 347 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 MTNR1AP48039 350 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 GMFBP60983 142 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 DCAF7P61962 342 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 PMP22Q01453 160 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 ZNF117Q03924 483 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 SLC25A35Q3KQZ1 300 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 SLC22A10Q63ZE4 541 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 PODNL1Q6PEZ8 512 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 FAM180AQ6UWF9 173 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 NAA40Q86UY6 237 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 KDM8Q8N371 416 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 FDCSPQ8NFU4 85 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 PFN4Q8NHR9 129 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 CASTOR1Q8WTX7 329 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 POM121Q96HA1 1249 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 ATF6BQ99941 703 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 PIGQQ9BRB3 760 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 DPH1Q9BZG8 443 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 ZNF700Q9H0M5 742 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 KLK11Q9UBX7 282 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 DKKL1Q9UK85 242 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 FKBP7Q9Y680 259 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 A0A0G2JMM0 328 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 A0A1W2PPB8 328 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 A0A1W2PRS3 328 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 CDHR4A6H8M9 788 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 KIR3DP1A8MWS1 328 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 C1QTNF9BB2RNN3 333 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 BLOC1S5-TXNDC5H3BN57 136 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 ZNF593O00488 134 aaPredicted RBP7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 SEMA7AO75326 666 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 TRIM3O75382 744 aaPredicted RBP7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 EPPINO95925 133 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 SERPINA7P05543 415 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 C1QTNF9P0C862 333 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 GDF1P27539 372 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 S100A11P31949 105 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 SOX2P48431 317 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 HEPHL1Q6MZM0 1159 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 SEZ6L2Q6UXD5 910 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 OR4K5Q8NGD3 323 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 OR8J1Q8NGP2 316 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 C14orf79Q96F83 325 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 ZNF75AQ96N20 296 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 HEXA-AS1Q9H8Q6 139 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 GSN-AS1Q9NRJ2 163 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 FAM96BQ9Y3D0 163 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 PCDHGB7Q9Y5F8 929 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 DIDO1Q9BTC0 2240 aaKnown RBP7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 PTPRBP23467 1997 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 C13orf42A0A1B0GVH6 325 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 OR6C65A6NJZ3 312 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 HPP00738 406 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 PLGP00747 810 aaPredicted RBP7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 ANXA2P07355 339 aaKnown RBP7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 FBXO45P0C2W1 286 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 GP1BBP13224 206 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 TACR3P29371 465 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 RPL4P36578 427 aaKnown RBP7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 PTGFRP43088 359 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 PTH2RP49190 550 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 ZNF41P51814 821 aaPredicted RBP7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 FABP9Q0Z7S8 132 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 SCGB2B2Q4G0G5 96 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 FAHD1Q6P587 224 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 C19orf48Q6RUI8 117 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 CXXC5Q7LFL8 322 aaKnown RBP7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 WDSUB1Q8N9V3 476 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 OR14L1PQ8NHC6 308 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 SLC7A13Q8TCU3 470 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 SLC25A28Q96A46 364 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 SIGLEC12Q96PQ1 595 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 MED18Q9BUE0 208 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 C20orf85Q9H1P6 137 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 SLC6A5Q9Y345 797 aa7.81□□□□□ -1.16
LIMCH1-209ENST00000509277 FFAR1O14842 300 aa7.8□□□□□ -1.16
LIMCH1-209ENST00000509277 SLC2A10O95528 541 aa7.8□□□□□ -1.16
LIMCH1-209ENST00000509277 SNRNP70P08621 437 aaKnown RBP7.8□□□□□ -1.16
LIMCH1-209ENST00000509277 GDNFP39905 211 aa7.8□□□□□ -1.16
LIMCH1-209ENST00000509277 CD96P40200 585 aa7.8□□□□□ -1.16
LIMCH1-209ENST00000509277 ST3GAL3Q11203 375 aa7.8□□□□□ -1.16
LIMCH1-209ENST00000509277 MLLT11Q13015 90 aaPredicted RBP7.8□□□□□ -1.16
LIMCH1-209ENST00000509277 OR1C1Q15619 314 aa7.8□□□□□ -1.16
LIMCH1-209ENST00000509277 SSX2Q16385 188 aa7.8□□□□□ -1.16
LIMCH1-209ENST00000509277 METAP1DQ6UB28 335 aaPredicted RBP7.8□□□□□ -1.16
LIMCH1-209ENST00000509277 C5orf46Q6UWT4 87 aa7.8□□□□□ -1.16
LIMCH1-209ENST00000509277 PLXDC2Q6UX71 529 aa7.8□□□□□ -1.16
LIMCH1-209ENST00000509277 BVESQ8NE79 360 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms