RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 RNF103-CHMP3A0A140T963 221 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 EXOC1LA0A1B0GW35 172 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 A0A1B0GX30 115 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 LRRC30A6NM36 301 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 CCT8L1PA6NM43 557 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 ZAR1LA6NP61 321 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 OOSP1A8MZH6 123 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 NDUFAB1O14561 156 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 CHP2O43745 196 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 PTP4A3O75365 173 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 LYZL6O75951 148 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 OR5F1O95221 314 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 TXNDC12O95881 172 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 OPN1MWP04001 364 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 OPN1MW2P0DN77 364 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 OPN1MW3P0DN78 364 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 IDO1P14902 403 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 CPA3P15088 417 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 ATP6V1B1P15313 513 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 ZNF43P17038 809 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 CFL1P23528 166 aaKnown RBP2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 GTF2E2P29084 291 aaKnown RBP2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 SSTR1P30872 391 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 MMP15P51511 669 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 ERVK-25P63136 954 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 SCRN3Q0VDG4 424 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 BAMBIQ13145 260 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 PMS2P3Q13401 168 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 SNTB2Q13425 540 aaKnown RBP2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 DYRK1AQ13627 763 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 NFYCQ13952 458 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 GGTLC2Q14390 218 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 FASTKD3Q14CZ7 662 aaKnown RBP2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 SLC9A3R2Q15599 337 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 EXOC3L2Q2M3D2 409 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 ZNF404Q494X3 552 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 ZNF385BQ569K4 471 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 THEM4Q5T1C6 240 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 HIST2H2BDQ6DRA6 164 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 ASPHD2Q6ICH7 369 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 C17orf107Q6ZR85 190 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 PRUNE1Q86TP1 453 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 CTAGE3PQ8IX95 158 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 IFT20Q8IY31 132 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 CEP112Q8N8E3 955 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 SLC16A11Q8NCK7 471 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 NOXO1Q8NFA2 376 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 OR4N2Q8NGD1 307 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 OR5J2Q8NH18 312 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 RFWD2Q8NHY2 731 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 DOK4Q8TEW6 326 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 HAVCR1Q96D42 359 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 KTI12Q96EK9 354 aaPredicted RBP2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 SLC25A44Q96H78 314 aaPredicted RBP2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 RSRC1Q96IZ7 334 aaKnown RBP2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 ITCHQ96J02 903 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 FOXN4Q96NZ1 517 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 MNTQ99583 582 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 CCDC28BQ9BUN5 200 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 ELOVL1Q9BW60 279 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 CAB39LQ9H9S4 337 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 CDH20Q9HBT6 801 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 NOX3Q9HBY0 568 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 AIG1Q9NVV5 245 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 RASL12Q9NYN1 266 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 TMEM5Q9Y2B1 443 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 RAP2CQ9Y3L5 183 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 TBL2Q9Y4P3 447 aaKnown RBP2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 INTS1Q8N201 2190 aaKnown RBP2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 SPTBP11277 2137 aa2.28□□□□□ -2.05
DEPDC1-203ENST00000488146 A0A0B4J2E0 115 aa2.27□□□□□ -2.05
DEPDC1-203ENST00000488146 A0A1B0GX12 115 aa2.27□□□□□ -2.05
DEPDC1-203ENST00000488146 NCF1BA6NI72 391 aaPredicted RBP2.27□□□□□ -2.05
DEPDC1-203ENST00000488146 TMEM210A6NLX4 147 aa2.27□□□□□ -2.05
DEPDC1-203ENST00000488146 NCF1CA8MVU1 366 aaPredicted RBP2.27□□□□□ -2.05
DEPDC1-203ENST00000488146 ZNF879B4DU55 563 aa2.27□□□□□ -2.05
DEPDC1-203ENST00000488146 PTGES3LE9PB15 166 aa2.27□□□□□ -2.05
DEPDC1-203ENST00000488146 SAP18O00422 153 aaKnown RBP2.27□□□□□ -2.05
DEPDC1-203ENST00000488146 PLPP3O14495 311 aa2.27□□□□□ -2.05
DEPDC1-203ENST00000488146 SPRY2O43597 315 aa2.27□□□□□ -2.05
DEPDC1-203ENST00000488146 IDH3BO43837 385 aa2.27□□□□□ -2.05
DEPDC1-203ENST00000488146 GMDSO60547 372 aa2.27□□□□□ -2.05
DEPDC1-203ENST00000488146 SEC22BO75396 215 aa2.27□□□□□ -2.05
DEPDC1-203ENST00000488146 RAD51DO75771 328 aa2.27□□□□□ -2.05
DEPDC1-203ENST00000488146 SUPT7LO94864 414 aa2.27□□□□□ -2.05
DEPDC1-203ENST00000488146 IGHG1P01857 330 aa2.27□□□□□ -2.05
DEPDC1-203ENST00000488146 CHRM4P08173 479 aa2.27□□□□□ -2.05
DEPDC1-203ENST00000488146 SPARCP09486 303 aa2.27□□□□□ -2.05
DEPDC1-203ENST00000488146 WNT2P09544 360 aa2.27□□□□□ -2.05
DEPDC1-203ENST00000488146 TMEM225BP0DP42 221 aa2.27□□□□□ -2.05
DEPDC1-203ENST00000488146 NCF1P14598 390 aaPredicted RBP2.27□□□□□ -2.05
DEPDC1-203ENST00000488146 CHN1P15882 459 aa2.27□□□□□ -2.05
DEPDC1-203ENST00000488146 TACR3P29371 465 aa2.27□□□□□ -2.05
DEPDC1-203ENST00000488146 DDOSTP39656 456 aa2.27□□□□□ -2.05
DEPDC1-203ENST00000488146 GLIPR1P48060 266 aa2.27□□□□□ -2.05
DEPDC1-203ENST00000488146 CSNK1A1P48729 337 aa2.27□□□□□ -2.05
DEPDC1-203ENST00000488146 TMEM30BQ3MIR4 351 aa2.27□□□□□ -2.05
DEPDC1-203ENST00000488146 GPAT3Q53EU6 434 aa2.27□□□□□ -2.05
DEPDC1-203ENST00000488146 C6orf136Q5SQH8 315 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms