RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 ACSM2AQ08AH3 577 aa5.09□□□□□ -1.59
HDAC3-206ENST00000471968 SSX2Q16385 188 aa5.09□□□□□ -1.59
HDAC3-206ENST00000471968 MRGPRG-AS1Q2M3A8 158 aa5.09□□□□□ -1.59
HDAC3-206ENST00000471968 TMEM177Q53S58 311 aa5.09□□□□□ -1.59
HDAC3-206ENST00000471968 INTS11Q5TA45 600 aaKnown RBP5.09□□□□□ -1.59
HDAC3-206ENST00000471968 ACSM2BQ68CK6 577 aa5.09□□□□□ -1.59
HDAC3-206ENST00000471968 GPR139Q6DWJ6 353 aa5.09□□□□□ -1.59
HDAC3-206ENST00000471968 FAM71E1Q6IPT2 247 aa5.09□□□□□ -1.59
HDAC3-206ENST00000471968 ANKRD26P1Q6NSI1 321 aa5.09□□□□□ -1.59
HDAC3-206ENST00000471968 BAIAP2L2Q6UXY1 529 aa5.09□□□□□ -1.59
HDAC3-206ENST00000471968 HMGN2P46Q86SG4 172 aa5.09□□□□□ -1.59
HDAC3-206ENST00000471968 SLC30A8Q8IWU4 369 aa5.09□□□□□ -1.59
HDAC3-206ENST00000471968 UEVLDQ8IX04 471 aa5.09□□□□□ -1.59
HDAC3-206ENST00000471968 C10orf111Q8N326 155 aa5.09□□□□□ -1.59
HDAC3-206ENST00000471968 LRRC18Q8N456 261 aa5.09□□□□□ -1.59
HDAC3-206ENST00000471968 UBL4BQ8N7F7 174 aa5.09□□□□□ -1.59
HDAC3-206ENST00000471968 Q8TCH9 128 aa5.09□□□□□ -1.59
HDAC3-206ENST00000471968 CAPSLQ8WWF8 208 aa5.09□□□□□ -1.59
HDAC3-206ENST00000471968 KCTD12Q96CX2 325 aaKnown RBP5.09□□□□□ -1.59
HDAC3-206ENST00000471968 FAM120BQ96EK7 910 aaKnown RBP5.09□□□□□ -1.59
HDAC3-206ENST00000471968 WDR89Q96FK6 387 aaPredicted RBP5.09□□□□□ -1.59
HDAC3-206ENST00000471968 TXNDC15Q96J42 360 aa5.09□□□□□ -1.59
HDAC3-206ENST00000471968 NOL4LQ96MY1 436 aaPredicted RBP5.09□□□□□ -1.59
HDAC3-206ENST00000471968 ZNF583Q96ND8 569 aa5.09□□□□□ -1.59
HDAC3-206ENST00000471968 SDF2Q99470 211 aa5.09□□□□□ -1.59
HDAC3-206ENST00000471968 IQCGQ9H095 443 aaKnown RBP5.09□□□□□ -1.59
HDAC3-206ENST00000471968 ELOVL3Q9HB03 270 aa5.09□□□□□ -1.59
HDAC3-206ENST00000471968 ZCCHC3Q9NUD5 404 aaKnown RBP5.09□□□□□ -1.59
HDAC3-206ENST00000471968 ATP6V1HQ9UI12 483 aa5.09□□□□□ -1.59
HDAC3-206ENST00000471968 A0A1W2PQ09 198 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 HTR3EA5X5Y0 456 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 ZNF726A6NNF4 738 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 A8MVM7 634 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 FTCDNL1E5RQL4 147 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 H3BUI4 141 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 MLNRO43193 412 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 FZD7O75084 574 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 AHSA1O95433 338 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 RPLP1P05386 114 aaKnown RBP5.08□□□□□ -1.6
HDAC3-206ENST00000471968 TFAP2AP05549 437 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 MMP7P09237 267 aaPredicted RBP5.08□□□□□ -1.6
HDAC3-206ENST00000471968 EFNA1P20827 205 aaPredicted RBP5.08□□□□□ -1.6
HDAC3-206ENST00000471968 COX7A1P24310 79 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 AZGP1P25311 298 aaKnown RBP5.08□□□□□ -1.6
HDAC3-206ENST00000471968 ELF3P78545 371 aaPredicted RBP5.08□□□□□ -1.6
HDAC3-206ENST00000471968 SLC7A5Q01650 507 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 ZNF45Q02386 682 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 PLAURQ03405 335 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 IKZF1Q13422 519 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 SEC23BQ15437 767 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 MPPED2Q15777 294 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 FAM153CQ494X1 144 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 SPIN4Q56A73 249 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 CFAP157Q5JU67 520 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 PRAMEF6Q5VXH4 476 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 ACSM6Q6P461 480 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 WDR88Q6ZMY6 472 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 HAPLN4Q86UW8 402 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 FAM90A1Q86YD7 464 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 OR11H1Q8NG94 326 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 OR4F6Q8NGB9 312 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 OR5D13Q8NGL4 314 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 OR13G1Q8NGZ3 307 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 AKR7LQ8NHP1 331 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 ZFP28Q8NHY6 868 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 AENQ8WTP8 325 aaKnown RBP5.08□□□□□ -1.6
HDAC3-206ENST00000471968 AKR1E2Q96JD6 320 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 UBXN10Q96LJ8 280 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 C4orf45Q96LM5 186 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 CCL13Q99616 98 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 MEAF6Q9HAF1 191 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 RNF7Q9UBF6 113 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 PRPF19Q9UMS4 504 aaKnown RBP5.08□□□□□ -1.6
HDAC3-206ENST00000471968 SNX6Q9UNH7 406 aa5.08□□□□□ -1.6
HDAC3-206ENST00000471968 FAF1Q9UNN5 650 aaPredicted RBP5.08□□□□□ -1.6
HDAC3-206ENST00000471968 IGHV3OR15-7A0A075B7D8 119 aa5.07□□□□□ -1.6
HDAC3-206ENST00000471968 M0R082 166 aa5.07□□□□□ -1.6
HDAC3-206ENST00000471968 CCRL2O00421 344 aa5.07□□□□□ -1.6
HDAC3-206ENST00000471968 CBFA2T2O43439 604 aa5.07□□□□□ -1.6
HDAC3-206ENST00000471968 HLA-DPB1P04440 258 aa5.07□□□□□ -1.6
HDAC3-206ENST00000471968 PGA5P0DJD9 388 aa5.07□□□□□ -1.6
HDAC3-206ENST00000471968 CBLP22681 906 aa5.07□□□□□ -1.6
HDAC3-206ENST00000471968 PRPH2P23942 346 aa5.07□□□□□ -1.6
HDAC3-206ENST00000471968 HSD17B3P37058 310 aa5.07□□□□□ -1.6
HDAC3-206ENST00000471968 GSTM5P46439 218 aa5.07□□□□□ -1.6
HDAC3-206ENST00000471968 RPS5P46782 204 aaKnown RBP5.07□□□□□ -1.6
HDAC3-206ENST00000471968 ALDH18A1P54886 795 aaKnown RBP5.07□□□□□ -1.6
HDAC3-206ENST00000471968 GUCY1A3Q02108 690 aa5.07□□□□□ -1.6
HDAC3-206ENST00000471968 DLG1Q12959 904 aa5.07□□□□□ -1.6
HDAC3-206ENST00000471968 MAB21L1Q13394 359 aa5.07□□□□□ -1.6
HDAC3-206ENST00000471968 TP53BP2Q13625 1128 aa5.07□□□□□ -1.6
HDAC3-206ENST00000471968 GGTA1PQ4G0N0 100 aa5.07□□□□□ -1.6
HDAC3-206ENST00000471968 ATG16L1Q676U5 607 aa5.07□□□□□ -1.6
HDAC3-206ENST00000471968 TRIM46Q7Z4K8 759 aa5.07□□□□□ -1.6
HDAC3-206ENST00000471968 C5orf24Q7Z6I8 188 aa5.07□□□□□ -1.6
HDAC3-206ENST00000471968 DHDDSQ86SQ9 333 aa5.07□□□□□ -1.6
HDAC3-206ENST00000471968 MKXQ8IYA7 352 aa5.07□□□□□ -1.6
HDAC3-206ENST00000471968 FAM216BQ8N7L0 139 aa5.07□□□□□ -1.6
HDAC3-206ENST00000471968 OR5D16Q8NGK9 328 aa5.07□□□□□ -1.6
HDAC3-206ENST00000471968 OR6S1Q8NH40 331 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms