RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 CENPAP49450 140 aa11.09□□□□□ -0.63
COL5A1-206ENST00000465877 EFNA4P52798 201 aa11.09□□□□□ -0.63
COL5A1-206ENST00000465877 GLO1Q04760 184 aa11.09□□□□□ -0.63
COL5A1-206ENST00000465877 TNK1Q13470 666 aa11.09□□□□□ -0.63
COL5A1-206ENST00000465877 KCNMB1Q16558 191 aa11.09□□□□□ -0.63
COL5A1-206ENST00000465877 MEP1BQ16820 701 aa11.09□□□□□ -0.63
COL5A1-206ENST00000465877 CLEC2AQ6UVW9 174 aa11.09□□□□□ -0.63
COL5A1-206ENST00000465877 CD300LDQ6UXZ3 194 aa11.09□□□□□ -0.63
COL5A1-206ENST00000465877 CCDC121Q6ZUS5 278 aa11.09□□□□□ -0.63
COL5A1-206ENST00000465877 VASH1Q7L8A9 365 aaPredicted RBP11.09□□□□□ -0.63
COL5A1-206ENST00000465877 BIVMQ86UB2 503 aa11.09□□□□□ -0.63
COL5A1-206ENST00000465877 ZNF101Q8IZC7 436 aa11.09□□□□□ -0.63
COL5A1-206ENST00000465877 OR6V1Q8N148 313 aa11.09□□□□□ -0.63
COL5A1-206ENST00000465877 LNX2Q8N448 690 aa11.09□□□□□ -0.63
COL5A1-206ENST00000465877 CYB561A3Q8NBI2 242 aa11.09□□□□□ -0.63
COL5A1-206ENST00000465877 NPEPL1Q8NDH3 523 aa11.09□□□□□ -0.63
COL5A1-206ENST00000465877 ICA1LQ8NDH6 482 aa11.09□□□□□ -0.63
COL5A1-206ENST00000465877 SLC26A10Q8NG04 563 aa11.09□□□□□ -0.63
COL5A1-206ENST00000465877 DOK1Q99704 481 aa11.09□□□□□ -0.63
COL5A1-206ENST00000465877 PLEK2Q9NYT0 353 aa11.09□□□□□ -0.63
COL5A1-206ENST00000465877 MYEF2Q9P2K5 600 aaKnown RBP11.09□□□□□ -0.63
COL5A1-206ENST00000465877 B9D1Q9UPM9 204 aa11.09□□□□□ -0.63
COL5A1-206ENST00000465877 BAIAP2Q9UQB8 552 aa11.09□□□□□ -0.63
COL5A1-206ENST00000465877 LHFPL6Q9Y693 200 aa11.09□□□□□ -0.63
COL5A1-206ENST00000465877 IGHV4-30-2A0A087WSY4 118 aa11.08□□□□□ -0.64
COL5A1-206ENST00000465877 H3BN98 237 aa11.08□□□□□ -0.64
COL5A1-206ENST00000465877 SYNGR3O43761 229 aa11.08□□□□□ -0.64
COL5A1-206ENST00000465877 ICMTO60725 284 aa11.08□□□□□ -0.64
COL5A1-206ENST00000465877 CIB2O75838 187 aa11.08□□□□□ -0.64
COL5A1-206ENST00000465877 CSF3P09919 207 aa11.08□□□□□ -0.64
COL5A1-206ENST00000465877 COX5BP10606 129 aa11.08□□□□□ -0.64
COL5A1-206ENST00000465877 ZNF3P17036 446 aa11.08□□□□□ -0.64
COL5A1-206ENST00000465877 RAD52P43351 418 aa11.08□□□□□ -0.64
COL5A1-206ENST00000465877 EVX1P49640 407 aa11.08□□□□□ -0.64
COL5A1-206ENST00000465877 UCP2P55851 309 aa11.08□□□□□ -0.64
COL5A1-206ENST00000465877 KLF3P57682 345 aaPredicted RBP11.08□□□□□ -0.64
COL5A1-206ENST00000465877 COX10Q12887 443 aa11.08□□□□□ -0.64
COL5A1-206ENST00000465877 CCNIQ14094 377 aa11.08□□□□□ -0.64
COL5A1-206ENST00000465877 CRMP1Q14194 572 aa11.08□□□□□ -0.64
COL5A1-206ENST00000465877 MAD2L1BPQ15013 274 aaPredicted RBP11.08□□□□□ -0.64
COL5A1-206ENST00000465877 SHQ1Q6PI26 577 aaKnown RBP11.08□□□□□ -0.64
COL5A1-206ENST00000465877 ASRGL1Q7L266 308 aa11.08□□□□□ -0.64
COL5A1-206ENST00000465877 LRP11Q86VZ4 500 aa11.08□□□□□ -0.64
COL5A1-206ENST00000465877 IQCF1Q8N6M8 205 aa11.08□□□□□ -0.64
COL5A1-206ENST00000465877 SLC37A3Q8NCC5 494 aa11.08□□□□□ -0.64
COL5A1-206ENST00000465877 PROKR2Q8NFJ6 384 aa11.08□□□□□ -0.64
COL5A1-206ENST00000465877 OR10H5Q8NGA6 315 aa11.08□□□□□ -0.64
COL5A1-206ENST00000465877 OR1J1Q8NGS3 322 aa11.08□□□□□ -0.64
COL5A1-206ENST00000465877 ABHD4Q8TB40 342 aa11.08□□□□□ -0.64
COL5A1-206ENST00000465877 SMR3AQ99954 134 aa11.08□□□□□ -0.64
COL5A1-206ENST00000465877 RBM4Q9BWF3 364 aaKnown RBP11.08□□□□□ -0.64
COL5A1-206ENST00000465877 TPK1Q9H3S4 243 aa11.08□□□□□ -0.64
COL5A1-206ENST00000465877 NTN4Q9HB63 628 aa11.08□□□□□ -0.64
COL5A1-206ENST00000465877 SRA1Q9HD15 236 aaKnown RBP11.08□□□□□ -0.64
COL5A1-206ENST00000465877 KIF17Q9P2E2 1029 aa11.08□□□□□ -0.64
COL5A1-206ENST00000465877 ATPIF1Q9UII2 106 aa11.08□□□□□ -0.64
COL5A1-206ENST00000465877 KLHL21Q9UJP4 597 aa11.08□□□□□ -0.64
COL5A1-206ENST00000465877 ABCA2Q9BZC7 2435 aa11.07□□□□□ -0.64
COL5A1-206ENST00000465877 YLPM1P49750 1951 aaKnown RBP11.07□□□□□ -0.64
COL5A1-206ENST00000465877 SETD2Q9BYW2 2564 aaPredicted RBP11.07□□□□□ -0.64
COL5A1-206ENST00000465877 IGLV3-9A0A075B6K5 115 aa11.07□□□□□ -0.64
COL5A1-206ENST00000465877 OR6C6A6NF89 314 aa11.07□□□□□ -0.64
COL5A1-206ENST00000465877 RNF223E7ERA6 249 aa11.07□□□□□ -0.64
COL5A1-206ENST00000465877 IFNGP01579 166 aa11.07□□□□□ -0.64
COL5A1-206ENST00000465877 ERCC1P07992 297 aaPredicted RBP11.07□□□□□ -0.64
COL5A1-206ENST00000465877 ZNF250P15622 560 aa11.07□□□□□ -0.64
COL5A1-206ENST00000465877 PYCR1P32322 319 aa11.07□□□□□ -0.64
COL5A1-206ENST00000465877 GRK5P34947 590 aa11.07□□□□□ -0.64
COL5A1-206ENST00000465877 ALDH3B1P43353 468 aa11.07□□□□□ -0.64
COL5A1-206ENST00000465877 DSCR9P59020 149 aa11.07□□□□□ -0.64
COL5A1-206ENST00000465877 TEKQ02763 1124 aa11.07□□□□□ -0.64
COL5A1-206ENST00000465877 SPATA46Q5T0L3 261 aa11.07□□□□□ -0.64
COL5A1-206ENST00000465877 ZCCHC24Q8N2G6 241 aaKnown RBP11.07□□□□□ -0.64
COL5A1-206ENST00000465877 ATG16L2Q8NAA4 619 aa11.07□□□□□ -0.64
COL5A1-206ENST00000465877 OR9Q1Q8NGQ5 310 aa11.07□□□□□ -0.64
COL5A1-206ENST00000465877 OR2T4Q8NH00 348 aa11.07□□□□□ -0.64
COL5A1-206ENST00000465877 SYNPRQ8TBG9 265 aa11.07□□□□□ -0.64
COL5A1-206ENST00000465877 IPCEF1Q8WWN9 437 aaPredicted RBP11.07□□□□□ -0.64
COL5A1-206ENST00000465877 UTP4Q969X6 686 aaKnown RBP11.07□□□□□ -0.64
COL5A1-206ENST00000465877 DDOQ99489 341 aa11.07□□□□□ -0.64
COL5A1-206ENST00000465877 HDHD2Q9H0R4 259 aa11.07□□□□□ -0.64
COL5A1-206ENST00000465877 RAB1BQ9H0U4 201 aa11.07□□□□□ -0.64
COL5A1-206ENST00000465877 GSX1Q9H4S2 264 aaPredicted RBP11.07□□□□□ -0.64
COL5A1-206ENST00000465877 ZNF556Q9HAH1 456 aa11.07□□□□□ -0.64
COL5A1-206ENST00000465877 REV1Q9UBZ9 1251 aa11.07□□□□□ -0.64
COL5A1-206ENST00000465877 DUSP13Q9UII6 198 aa11.07□□□□□ -0.64
COL5A1-206ENST00000465877 RIIAD1A6NNX1 92 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 FAM171A2A8MVW0 826 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 RER1O15258 196 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 ABHD16AO95870 558 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 CLPTM1O96005 669 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 F12P00748 615 aaPredicted RBP11.06□□□□□ -0.64
COL5A1-206ENST00000465877 HLA-DQA2P01906 255 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 TFP02787 698 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 GYPBP06028 91 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 ADRA2AP08913 450 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 ANXA8P13928 327 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 ARHGDIAP52565 204 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 HIST1H3AP68431 136 aa11.06□□□□□ -0.64
COL5A1-206ENST00000465877 ATP6AP1Q15904 470 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms