RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 NKAIN4Q8IVV8 208 aa14.52□□□□□ -0.09
HMGN1-209ENST00000463631 SLC26A7Q8TE54 656 aa14.52□□□□□ -0.09
HMGN1-209ENST00000463631 TMEM239Q8WW34 195 aa14.52□□□□□ -0.09
HMGN1-209ENST00000463631 STON2Q8WXE9 905 aa14.52□□□□□ -0.09
HMGN1-209ENST00000463631 DACT3Q96B18 629 aaPredicted RBP14.52□□□□□ -0.09
HMGN1-209ENST00000463631 UPRTQ96BW1 309 aa14.52□□□□□ -0.09
HMGN1-209ENST00000463631 WACQ9BTA9 647 aa14.52□□□□□ -0.09
HMGN1-209ENST00000463631 MS4A7Q9GZW8 240 aaPredicted RBP14.52□□□□□ -0.09
HMGN1-209ENST00000463631 TBCCD1Q9NVR7 557 aa14.52□□□□□ -0.09
HMGN1-209ENST00000463631 PPP1R3CQ9UQK1 317 aa14.52□□□□□ -0.09
HMGN1-209ENST00000463631 NDUFAF1Q9Y375 327 aa14.52□□□□□ -0.09
HMGN1-209ENST00000463631 CMYA5Q8N3K9 4069 aa14.51□□□□□ -0.09
HMGN1-209ENST00000463631 HTR3EA5X5Y0 456 aa14.51□□□□□ -0.09
HMGN1-209ENST00000463631 ANGPT2O15123 496 aa14.51□□□□□ -0.09
HMGN1-209ENST00000463631 SURF4O15260 269 aa14.51□□□□□ -0.09
HMGN1-209ENST00000463631 ABHD16AO95870 558 aa14.51□□□□□ -0.09
HMGN1-209ENST00000463631 IGHV4-38-2P0DP08 117 aa14.51□□□□□ -0.09
HMGN1-209ENST00000463631 THRBP10828 461 aa14.51□□□□□ -0.09
HMGN1-209ENST00000463631 MDKP21741 143 aaPredicted RBP14.51□□□□□ -0.09
HMGN1-209ENST00000463631 TAS2R41P59536 307 aa14.51□□□□□ -0.09
HMGN1-209ENST00000463631 ENDOGQ14249 297 aaKnown RBP14.51□□□□□ -0.09
HMGN1-209ENST00000463631 VMACQ2NL98 169 aa14.51□□□□□ -0.09
HMGN1-209ENST00000463631 ALG10Q5BKT4 473 aa14.51□□□□□ -0.09
HMGN1-209ENST00000463631 Q6ZR03 302 aa14.51□□□□□ -0.09
HMGN1-209ENST00000463631 OR52E2Q8NGJ4 325 aa14.51□□□□□ -0.09
HMGN1-209ENST00000463631 RBP7Q96R05 134 aa14.51□□□□□ -0.09
HMGN1-209ENST00000463631 DOCK11Q5JSL3 2073 aa14.5□□□□□ -0.09
HMGN1-209ENST00000463631 A0A1B0GUS0 222 aa14.5□□□□□ -0.09
HMGN1-209ENST00000463631 CEACAM18A8MTB9 384 aa14.5□□□□□ -0.09
HMGN1-209ENST00000463631 C12orf71A8MTZ7 269 aa14.5□□□□□ -0.09
HMGN1-209ENST00000463631 IFNL4K9M1U5 179 aa14.5□□□□□ -0.09
HMGN1-209ENST00000463631 MSR1P21757 451 aa14.5□□□□□ -0.09
HMGN1-209ENST00000463631 GUCA1AP43080 201 aaPredicted RBP14.5□□□□□ -0.09
HMGN1-209ENST00000463631 MMP16P51512 607 aa14.5□□□□□ -0.09
HMGN1-209ENST00000463631 RPL27P61353 136 aaKnown RBP14.5□□□□□ -0.09
HMGN1-209ENST00000463631 LRRN1Q6UXK5 716 aa14.5□□□□□ -0.09
HMGN1-209ENST00000463631 OR2Z1Q8NG97 314 aa14.5□□□□□ -0.09
HMGN1-209ENST00000463631 TSPEARQ8WU66 669 aa14.5□□□□□ -0.09
HMGN1-209ENST00000463631 WFDC12Q8WWY7 111 aa14.5□□□□□ -0.09
HMGN1-209ENST00000463631 TMIGD2Q96BF3 282 aa14.5□□□□□ -0.09
HMGN1-209ENST00000463631 THOC1Q96FV9 657 aaKnown RBP14.5□□□□□ -0.09
HMGN1-209ENST00000463631 PRDM13Q9H4Q3 707 aa14.5□□□□□ -0.09
HMGN1-209ENST00000463631 RIMS3Q9UJD0 308 aa14.5□□□□□ -0.09
HMGN1-209ENST00000463631 BAG5Q9UL15 447 aa14.5□□□□□ -0.09
HMGN1-209ENST00000463631 SH3GLB1Q9Y371 365 aa14.5□□□□□ -0.09
HMGN1-209ENST00000463631 MED31Q9Y3C7 131 aa14.5□□□□□ -0.09
HMGN1-209ENST00000463631 TMEM178BH3BS89 294 aa14.49□□□□□ -0.09
HMGN1-209ENST00000463631 FSTL3O95633 263 aa14.49□□□□□ -0.09
HMGN1-209ENST00000463631 WNT2P09544 360 aa14.49□□□□□ -0.09
HMGN1-209ENST00000463631 GZMMP51124 257 aa14.49□□□□□ -0.09
HMGN1-209ENST00000463631 TOP3AQ13472 1001 aaPredicted RBP14.49□□□□□ -0.09
HMGN1-209ENST00000463631 LAPTM4AQ15012 233 aa14.49□□□□□ -0.09
HMGN1-209ENST00000463631 C16orf87Q6PH81 154 aa14.49□□□□□ -0.09
HMGN1-209ENST00000463631 CLDN22Q8N7P3 220 aa14.49□□□□□ -0.09
HMGN1-209ENST00000463631 OR10A6Q8NH74 314 aa14.49□□□□□ -0.09
HMGN1-209ENST00000463631 LRRC8CQ8TDW0 803 aa14.49□□□□□ -0.09
HMGN1-209ENST00000463631 ITLN1Q8WWA0 313 aa14.49□□□□□ -0.09
HMGN1-209ENST00000463631 OR2V2Q96R30 315 aa14.49□□□□□ -0.09
HMGN1-209ENST00000463631 SSBP3Q9BWW4 388 aaPredicted RBP14.49□□□□□ -0.09
HMGN1-209ENST00000463631 POFUT1Q9H488 388 aa14.49□□□□□ -0.09
HMGN1-209ENST00000463631 TMBIM4Q9HC24 238 aa14.49□□□□□ -0.09
HMGN1-209ENST00000463631 GCM1Q9NP62 436 aa14.49□□□□□ -0.09
HMGN1-209ENST00000463631 POLE4Q9NR33 117 aa14.49□□□□□ -0.09
HMGN1-209ENST00000463631 IGHV2-70DA0A0C4DH43 119 aa14.48□□□□□ -0.09
HMGN1-209ENST00000463631 A6NIZ1 184 aa14.48□□□□□ -0.09
HMGN1-209ENST00000463631 J3QW42 95 aa14.48□□□□□ -0.09
HMGN1-209ENST00000463631 RBMXP38159 391 aaKnown RBP14.48□□□□□ -0.09
HMGN1-209ENST00000463631 RAP1BP61224 184 aa14.48□□□□□ -0.09
HMGN1-209ENST00000463631 RAP1AP62834 184 aa14.48□□□□□ -0.09
HMGN1-209ENST00000463631 SCRN3Q0VDG4 424 aa14.48□□□□□ -0.09
HMGN1-209ENST00000463631 PIN1Q13526 163 aaPredicted RBP14.48□□□□□ -0.09
HMGN1-209ENST00000463631 ZNF362Q5T0B9 420 aaPredicted RBP14.48□□□□□ -0.09
HMGN1-209ENST00000463631 BTNL3Q6UXE8 466 aa14.48□□□□□ -0.09
HMGN1-209ENST00000463631 SPATC1Q76KD6 591 aa14.48□□□□□ -0.09
HMGN1-209ENST00000463631 LRRC75AQ8NAA5 344 aa14.48□□□□□ -0.09
HMGN1-209ENST00000463631 HAVCR1Q96D42 359 aa14.48□□□□□ -0.09
HMGN1-209ENST00000463631 COG8Q96MW5 612 aa14.48□□□□□ -0.09
HMGN1-209ENST00000463631 TRAV40A0A0B4J280 105 aa14.47□□□□□ -0.09
HMGN1-209ENST00000463631 A0A1W2PPL8 197 aa14.47□□□□□ -0.09
HMGN1-209ENST00000463631 RPS2P15880 293 aaKnown RBP14.47□□□□□ -0.09
HMGN1-209ENST00000463631 GUCY1A3Q02108 690 aa14.47□□□□□ -0.09
HMGN1-209ENST00000463631 NFYCQ13952 458 aa14.47□□□□□ -0.09
HMGN1-209ENST00000463631 ANKDD1AQ495B1 522 aa14.47□□□□□ -0.09
HMGN1-209ENST00000463631 POU5F2Q8N7G0 328 aa14.47□□□□□ -0.09
HMGN1-209ENST00000463631 TAF15Q92804 592 aaKnown RBP eCLIP14.47□□□□□ -0.09
HMGN1-209ENST00000463631 PIP5K1CO60331 668 aa14.46□□□□□ -0.09
HMGN1-209ENST00000463631 DOK2O60496 412 aa14.46□□□□□ -0.09
HMGN1-209ENST00000463631 RAC2P15153 192 aa14.46□□□□□ -0.09
HMGN1-209ENST00000463631 TNFRSF1BP20333 461 aa14.46□□□□□ -0.09
HMGN1-209ENST00000463631 HTR5AP47898 357 aa14.46□□□□□ -0.09
HMGN1-209ENST00000463631 VASH1Q7L8A9 365 aaPredicted RBP14.46□□□□□ -0.09
HMGN1-209ENST00000463631 CALHM3Q86XJ0 350 aa14.46□□□□□ -0.09
HMGN1-209ENST00000463631 KLBQ86Z14 1044 aa14.46□□□□□ -0.09
HMGN1-209ENST00000463631 FAM156AQ8NDB6 213 aa14.46□□□□□ -0.09
HMGN1-209ENST00000463631 RAB40AQ8WXH6 277 aa14.46□□□□□ -0.09
HMGN1-209ENST00000463631 CMBLQ96DG6 245 aa14.46□□□□□ -0.09
HMGN1-209ENST00000463631 BPIFA2Q96DR5 249 aa14.46□□□□□ -0.09
HMGN1-209ENST00000463631 MAGEB18Q96M61 343 aa14.46□□□□□ -0.09
HMGN1-209ENST00000463631 MIOXQ9UGB7 285 aa14.46□□□□□ -0.09
HMGN1-209ENST00000463631 STARD10Q9Y365 291 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms