RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 ZER1Q7Z7L7 766 aa17.63■□□□□ 0.41
SDC1-205ENST00000447124 PYURFQ96I23 114 aa17.63■□□□□ 0.41
SDC1-205ENST00000447124 RSRC1Q96IZ7 334 aaKnown RBP17.63■□□□□ 0.41
SDC1-205ENST00000447124 WACQ9BTA9 647 aa17.63■□□□□ 0.41
SDC1-205ENST00000447124 SYT4Q9H2B2 425 aa17.63■□□□□ 0.41
SDC1-205ENST00000447124 VSX1Q9NZR4 365 aaPredicted RBP17.63■□□□□ 0.41
SDC1-205ENST00000447124 SAMD4AQ9UPU9 718 aaKnown RBP17.63■□□□□ 0.41
SDC1-205ENST00000447124 V9GYQ6 96 aa17.63■□□□□ 0.41
SDC1-205ENST00000447124 UNC119BA6NIH7 251 aa17.62■□□□□ 0.41
SDC1-205ENST00000447124 TPD52L2O43399 206 aaKnown RBP17.62■□□□□ 0.41
SDC1-205ENST00000447124 KHDRBS3O75525 346 aaKnown RBP17.62■□□□□ 0.41
SDC1-205ENST00000447124 COX5BP10606 129 aa17.62■□□□□ 0.41
SDC1-205ENST00000447124 SDHAP31040 664 aa17.62■□□□□ 0.41
SDC1-205ENST00000447124 PSG7Q13046 419 aa17.62■□□□□ 0.41
SDC1-205ENST00000447124 HNRNPA0Q13151 305 aaKnown RBP17.62■□□□□ 0.41
SDC1-205ENST00000447124 GPR139Q6DWJ6 353 aa17.62■□□□□ 0.41
SDC1-205ENST00000447124 CPLX4Q7Z7G2 160 aa17.62■□□□□ 0.41
SDC1-205ENST00000447124 C1orf174Q8IYL3 243 aa17.62■□□□□ 0.41
SDC1-205ENST00000447124 SLC7A6Q92536 515 aa17.62■□□□□ 0.41
SDC1-205ENST00000447124 TMEM186Q96B77 213 aa17.62■□□□□ 0.41
SDC1-205ENST00000447124 NUAK2Q9H093 628 aa17.62■□□□□ 0.41
SDC1-205ENST00000447124 ELOVL3Q9HB03 270 aa17.62■□□□□ 0.41
SDC1-205ENST00000447124 ARL8BQ9NVJ2 186 aa17.62■□□□□ 0.41
SDC1-205ENST00000447124 HIF1ANQ9NWT6 349 aa17.62■□□□□ 0.41
SDC1-205ENST00000447124 AURKCQ9UQB9 309 aa17.62■□□□□ 0.41
SDC1-205ENST00000447124 FBN3Q75N90 2809 aa17.62■□□□□ 0.41
SDC1-205ENST00000447124 SOCS2O14508 198 aa17.61■□□□□ 0.41
SDC1-205ENST00000447124 TXNDC12O95881 172 aa17.61■□□□□ 0.41
SDC1-205ENST00000447124 MT-ND5P03915 603 aa17.61■□□□□ 0.41
SDC1-205ENST00000447124 MSMBP08118 114 aa17.61■□□□□ 0.41
SDC1-205ENST00000447124 ADH4P08319 380 aa17.61■□□□□ 0.41
SDC1-205ENST00000447124 HSD17B1P14061 328 aa17.61■□□□□ 0.41
SDC1-205ENST00000447124 RBMXP38159 391 aaKnown RBP17.61■□□□□ 0.41
SDC1-205ENST00000447124 TEKQ02763 1124 aa17.61■□□□□ 0.41
SDC1-205ENST00000447124 DBPQ10586 325 aaPredicted RBP17.61■□□□□ 0.41
SDC1-205ENST00000447124 CCDC92Q53HC0 331 aaPredicted RBP17.61■□□□□ 0.41
SDC1-205ENST00000447124 FAM209AQ5JX71 171 aa17.61■□□□□ 0.41
SDC1-205ENST00000447124 UNQ6126/PRO20091Q6UXV3 157 aa17.61■□□□□ 0.41
SDC1-205ENST00000447124 DPY19L2P2Q6ZN68 376 aa17.61■□□□□ 0.41
SDC1-205ENST00000447124 VASH1Q7L8A9 365 aaPredicted RBP17.61■□□□□ 0.41
SDC1-205ENST00000447124 GLCCI1Q86VQ1 547 aa17.61■□□□□ 0.41
SDC1-205ENST00000447124 CDRT15Q96T59 188 aa17.61■□□□□ 0.41
SDC1-205ENST00000447124 REPIN1Q9BWE0 567 aaKnown RBP17.61■□□□□ 0.41
SDC1-205ENST00000447124 RERGLQ9H628 205 aa17.61■□□□□ 0.41
SDC1-205ENST00000447124 SAP30LQ9HAJ7 183 aa17.61■□□□□ 0.41
SDC1-205ENST00000447124 MSL2Q9HCI7 577 aa17.61■□□□□ 0.41
SDC1-205ENST00000447124 TBCCD1Q9NVR7 557 aa17.61■□□□□ 0.41
SDC1-205ENST00000447124 NDRG4Q9ULP0 352 aaKnown RBP17.61■□□□□ 0.41
SDC1-205ENST00000447124 STARD10Q9Y365 291 aa17.61■□□□□ 0.41
SDC1-205ENST00000447124 WIPI2Q9Y4P8 454 aa17.61■□□□□ 0.41
SDC1-205ENST00000447124 WNK2Q9Y3S1 2297 aa17.6■□□□□ 0.41
SDC1-205ENST00000447124 DCTN6O00399 190 aa17.6■□□□□ 0.41
SDC1-205ENST00000447124 SGCEO43556 437 aa17.6■□□□□ 0.41
SDC1-205ENST00000447124 DOK2O60496 412 aa17.6■□□□□ 0.41
SDC1-205ENST00000447124 DEAF1O75398 565 aaPredicted RBP17.6■□□□□ 0.41
SDC1-205ENST00000447124 GMNNO75496 209 aa17.6■□□□□ 0.41
SDC1-205ENST00000447124 UBOX5O94941 541 aa17.6■□□□□ 0.41
SDC1-205ENST00000447124 GPANK1O95872 356 aa17.6■□□□□ 0.41
SDC1-205ENST00000447124 SRP14P37108 136 aaKnown RBP17.6■□□□□ 0.41
SDC1-205ENST00000447124 ARHGDIAP52565 204 aa17.6■□□□□ 0.41
SDC1-205ENST00000447124 SCRN3Q0VDG4 424 aa17.6■□□□□ 0.41
SDC1-205ENST00000447124 RINLQ6ZS11 566 aa17.6■□□□□ 0.41
SDC1-205ENST00000447124 PIGWQ7Z7B1 504 aa17.6■□□□□ 0.41
SDC1-205ENST00000447124 CCL17Q92583 94 aa17.6■□□□□ 0.41
SDC1-205ENST00000447124 TSSK2Q96PF2 358 aa17.6■□□□□ 0.41
SDC1-205ENST00000447124 LRRC37BQ96QE4 947 aa17.6■□□□□ 0.41
SDC1-205ENST00000447124 ZNF665Q9H7R5 613 aa17.6■□□□□ 0.41
SDC1-205ENST00000447124 ARHGAP32A7KAX9 2087 aa17.59■□□□□ 0.41
SDC1-205ENST00000447124 PLSCR5A0PG75 271 aa17.59■□□□□ 0.41
SDC1-205ENST00000447124 H3BSA7 217 aa17.59■□□□□ 0.41
SDC1-205ENST00000447124 ABHD16AO95870 558 aa17.59■□□□□ 0.41
SDC1-205ENST00000447124 LIPAP38571 399 aa17.59■□□□□ 0.41
SDC1-205ENST00000447124 HTR5AP47898 357 aa17.59■□□□□ 0.41
SDC1-205ENST00000447124 LSM6P62312 80 aaKnown RBP17.59■□□□□ 0.41
SDC1-205ENST00000447124 KRT72Q14CN4 511 aa17.59■□□□□ 0.41
SDC1-205ENST00000447124 KCNMB1Q16558 191 aa17.59■□□□□ 0.41
SDC1-205ENST00000447124 HFEQ30201 348 aa17.59■□□□□ 0.41
SDC1-205ENST00000447124 RFX4Q33E94 735 aa17.59■□□□□ 0.41
SDC1-205ENST00000447124 SMARCD3Q6STE5 483 aa17.59■□□□□ 0.41
SDC1-205ENST00000447124 GLB1L2Q8IW92 636 aa17.59■□□□□ 0.41
SDC1-205ENST00000447124 PGAM4Q8N0Y7 254 aa17.59■□□□□ 0.41
SDC1-205ENST00000447124 CMBLQ96DG6 245 aa17.59■□□□□ 0.41
SDC1-205ENST00000447124 ELMOD3Q96FG2 381 aa17.59■□□□□ 0.41
SDC1-205ENST00000447124 C19orf24Q9BVV8 132 aa17.59■□□□□ 0.41
SDC1-205ENST00000447124 NDEL1Q9GZM8 345 aa17.59■□□□□ 0.41
SDC1-205ENST00000447124 CYSLTR2Q9NS75 346 aa17.59■□□□□ 0.41
SDC1-205ENST00000447124 DCAF16Q9NXF7 216 aa17.59■□□□□ 0.41
SDC1-205ENST00000447124 ASH2LQ9UBL3 628 aa17.59■□□□□ 0.41
SDC1-205ENST00000447124 GRIP1Q9Y3R0 1128 aa17.59■□□□□ 0.41
SDC1-205ENST00000447124 OR6C6A6NF89 314 aa17.58■□□□□ 0.4
SDC1-205ENST00000447124 RER1O15258 196 aa17.58■□□□□ 0.4
SDC1-205ENST00000447124 GADD45GO95257 159 aa17.58■□□□□ 0.4
SDC1-205ENST00000447124 PPP1R3DO95685 299 aa17.58■□□□□ 0.4
SDC1-205ENST00000447124 AVPP01185 164 aa17.58■□□□□ 0.4
SDC1-205ENST00000447124 ITGA2P17301 1181 aa17.58■□□□□ 0.4
SDC1-205ENST00000447124 GNGT1P63211 74 aa17.58■□□□□ 0.4
SDC1-205ENST00000447124 CDK5R2Q13319 367 aa17.58■□□□□ 0.4
SDC1-205ENST00000447124 AQP6Q13520 282 aa17.58■□□□□ 0.4
SDC1-205ENST00000447124 MTX3Q5HYI7 312 aa17.58■□□□□ 0.4
SDC1-205ENST00000447124 ARL9Q6T311 187 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms