RNA–Protein interactions for RNA: ENST00000434243.5

EDEM1-202, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 978 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-202ENST00000434243 WIPI2Q9Y4P8 454 aa11.34□□□□□ -0.59
EDEM1-202ENST00000434243 IER3IP1Q9Y5U9 82 aa11.34□□□□□ -0.59
EDEM1-202ENST00000434243 A0A1W2PRQ8 180 aa11.33□□□□□ -0.6
EDEM1-202ENST00000434243 ISPDA4D126 451 aa11.33□□□□□ -0.6
EDEM1-202ENST00000434243 PRSS37A4D1T9 235 aa11.33□□□□□ -0.6
EDEM1-202ENST00000434243 ZSCAN5BA6NJL1 495 aa11.33□□□□□ -0.6
EDEM1-202ENST00000434243 SOCS2O14508 198 aa11.33□□□□□ -0.6
EDEM1-202ENST00000434243 SGCEO43556 437 aa11.33□□□□□ -0.6
EDEM1-202ENST00000434243 KHDRBS3O75525 346 aaKnown RBP11.33□□□□□ -0.6
EDEM1-202ENST00000434243 CTLA4P16410 223 aa11.33□□□□□ -0.6
EDEM1-202ENST00000434243 ZNF26P17031 533 aaPredicted RBP11.33□□□□□ -0.6
EDEM1-202ENST00000434243 GSTM3P21266 225 aa11.33□□□□□ -0.6
EDEM1-202ENST00000434243 LIPAP38571 399 aa11.33□□□□□ -0.6
EDEM1-202ENST00000434243 MMP15P51511 669 aa11.33□□□□□ -0.6
EDEM1-202ENST00000434243 LMO4P61968 165 aa11.33□□□□□ -0.6
EDEM1-202ENST00000434243 DGCR6Q14129 220 aa11.33□□□□□ -0.6
EDEM1-202ENST00000434243 FAM209AQ5JX71 171 aa11.33□□□□□ -0.6
EDEM1-202ENST00000434243 ACSM5Q6NUN0 579 aa11.33□□□□□ -0.6
EDEM1-202ENST00000434243 THSD4Q6ZMP0 1018 aa11.33□□□□□ -0.6
EDEM1-202ENST00000434243 TSEN54Q7Z6J9 526 aaKnown RBP11.33□□□□□ -0.6
EDEM1-202ENST00000434243 CPLX4Q7Z7G2 160 aa11.33□□□□□ -0.6
EDEM1-202ENST00000434243 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.33□□□□□ -0.6
EDEM1-202ENST00000434243 RSRC1Q96IZ7 334 aaKnown RBP11.33□□□□□ -0.6
EDEM1-202ENST00000434243 WACQ9BTA9 647 aa11.33□□□□□ -0.6
EDEM1-202ENST00000434243 NSRP1Q9H0G5 558 aaKnown RBP11.33□□□□□ -0.6
EDEM1-202ENST00000434243 MYLK2Q9H1R3 596 aa11.33□□□□□ -0.6
EDEM1-202ENST00000434243 SYT4Q9H2B2 425 aa11.33□□□□□ -0.6
EDEM1-202ENST00000434243 MSL2Q9HCI7 577 aa11.33□□□□□ -0.6
EDEM1-202ENST00000434243 DCAF13Q9NV06 445 aaKnown RBP11.33□□□□□ -0.6
EDEM1-202ENST00000434243 PLEK2Q9NYT0 353 aa11.33□□□□□ -0.6
EDEM1-202ENST00000434243 NDUFAF4Q9P032 175 aa11.33□□□□□ -0.6
EDEM1-202ENST00000434243 ABCD2Q9UBJ2 740 aa11.33□□□□□ -0.6
EDEM1-202ENST00000434243 SIGLEC7Q9Y286 467 aa11.33□□□□□ -0.6
EDEM1-202ENST00000434243 COA3Q9Y2R0 106 aaPredicted RBP11.33□□□□□ -0.6
EDEM1-202ENST00000434243 POLR1DQ9Y2S0 133 aa11.33□□□□□ -0.6
EDEM1-202ENST00000434243 TRAV20A0A0B4J274 112 aa11.32□□□□□ -0.6
EDEM1-202ENST00000434243 TRBV4-1A0A0J9YWV2 114 aa11.32□□□□□ -0.6
EDEM1-202ENST00000434243 UNC119BA6NIH7 251 aa11.32□□□□□ -0.6
EDEM1-202ENST00000434243 AHCYL1O43865 530 aa11.32□□□□□ -0.6
EDEM1-202ENST00000434243 PTP4A3O75365 173 aa11.32□□□□□ -0.6
EDEM1-202ENST00000434243 MPZL1O95297 269 aa11.32□□□□□ -0.6
EDEM1-202ENST00000434243 ITGA2P17301 1181 aa11.32□□□□□ -0.6
EDEM1-202ENST00000434243 PRDX6P30041 224 aa11.32□□□□□ -0.6
EDEM1-202ENST00000434243 SDHAP31040 664 aa11.32□□□□□ -0.6
EDEM1-202ENST00000434243 OMPP47874 163 aa11.32□□□□□ -0.6
EDEM1-202ENST00000434243 RPS6KA3P51812 740 aa11.32□□□□□ -0.6
EDEM1-202ENST00000434243 TNFAIP6P98066 277 aaPredicted RBP11.32□□□□□ -0.6
EDEM1-202ENST00000434243 ZMAT1Q5H9K5 638 aa11.32□□□□□ -0.6
EDEM1-202ENST00000434243 MTX3Q5HYI7 312 aa11.32□□□□□ -0.6
EDEM1-202ENST00000434243 TMEM255AQ5JRV8 349 aa11.32□□□□□ -0.6
EDEM1-202ENST00000434243 GPR139Q6DWJ6 353 aa11.32□□□□□ -0.6
EDEM1-202ENST00000434243 FAM122BQ7Z309 247 aa11.32□□□□□ -0.6
EDEM1-202ENST00000434243 ZER1Q7Z7L7 766 aa11.32□□□□□ -0.6
EDEM1-202ENST00000434243 PEG10Q86TG7 708 aaKnown RBP11.32□□□□□ -0.6
EDEM1-202ENST00000434243 FAM86B1Q8N7N1 296 aa11.32□□□□□ -0.6
EDEM1-202ENST00000434243 FAM156AQ8NDB6 213 aa11.32□□□□□ -0.6
EDEM1-202ENST00000434243 GAL3ST1Q99999 423 aa11.32□□□□□ -0.6
EDEM1-202ENST00000434243 NRIP3Q9NQ35 241 aa11.32□□□□□ -0.6
EDEM1-202ENST00000434243 ZDHHC8Q9ULC8 765 aa11.32□□□□□ -0.6
EDEM1-202ENST00000434243 MALRD1Q5VYJ5 2156 aa11.31□□□□□ -0.6
EDEM1-202ENST00000434243 IMPA2O14732 288 aa11.31□□□□□ -0.6
EDEM1-202ENST00000434243 COX5BP10606 129 aa11.31□□□□□ -0.6
EDEM1-202ENST00000434243 LIMS1P48059 325 aa11.31□□□□□ -0.6
EDEM1-202ENST00000434243 SPIBQ01892 262 aa11.31□□□□□ -0.6
EDEM1-202ENST00000434243 SLC3A1Q07837 685 aa11.31□□□□□ -0.6
EDEM1-202ENST00000434243 PSG7Q13046 419 aa11.31□□□□□ -0.6
EDEM1-202ENST00000434243 AQP6Q13520 282 aa11.31□□□□□ -0.6
EDEM1-202ENST00000434243 SEC23BQ15437 767 aa11.31□□□□□ -0.6
EDEM1-202ENST00000434243 DPY19L2P2Q6ZN68 376 aa11.31□□□□□ -0.6
EDEM1-202ENST00000434243 VASH1Q7L8A9 365 aaPredicted RBP11.31□□□□□ -0.6
EDEM1-202ENST00000434243 GLB1L2Q8IW92 636 aa11.31□□□□□ -0.6
EDEM1-202ENST00000434243 NPEPL1Q8NDH3 523 aa11.31□□□□□ -0.6
EDEM1-202ENST00000434243 SLC7A6Q92536 515 aa11.31□□□□□ -0.6
EDEM1-202ENST00000434243 MCUR1Q96AQ8 359 aa11.31□□□□□ -0.6
EDEM1-202ENST00000434243 CMBLQ96DG6 245 aa11.31□□□□□ -0.6
EDEM1-202ENST00000434243 C7orf34Q96L11 122 aa11.31□□□□□ -0.6
EDEM1-202ENST00000434243 DCLRE1CQ96SD1 692 aaKnown RBP11.31□□□□□ -0.6
EDEM1-202ENST00000434243 DIRC2Q96SL1 478 aa11.31□□□□□ -0.6
EDEM1-202ENST00000434243 NUAK2Q9H093 628 aa11.31□□□□□ -0.6
EDEM1-202ENST00000434243 TBCCD1Q9NVR7 557 aa11.31□□□□□ -0.6
EDEM1-202ENST00000434243 UBAP1Q9NZ09 502 aa11.31□□□□□ -0.6
EDEM1-202ENST00000434243 ASH2LQ9UBL3 628 aa11.31□□□□□ -0.6
EDEM1-202ENST00000434243 CGGBP1Q9UFW8 167 aaPredicted RBP11.31□□□□□ -0.6
EDEM1-202ENST00000434243 FBN1P35555 2871 aaKnown RBP11.31□□□□□ -0.6
EDEM1-202ENST00000434243 CUBNO60494 3623 aa11.3□□□□□ -0.6
EDEM1-202ENST00000434243 H3BSA7 217 aa11.3□□□□□ -0.6
EDEM1-202ENST00000434243 HAX1O00165 279 aa11.3□□□□□ -0.6
EDEM1-202ENST00000434243 ATP8B1O43520 1251 aa11.3□□□□□ -0.6
EDEM1-202ENST00000434243 PLPP2O43688 288 aa11.3□□□□□ -0.6
EDEM1-202ENST00000434243 SNX3O60493 162 aa11.3□□□□□ -0.6
EDEM1-202ENST00000434243 RGS9O75916 674 aaPredicted RBP11.3□□□□□ -0.6
EDEM1-202ENST00000434243 UBOX5O94941 541 aa11.3□□□□□ -0.6
EDEM1-202ENST00000434243 GADD45GO95257 159 aa11.3□□□□□ -0.6
EDEM1-202ENST00000434243 PPP1R3DO95685 299 aa11.3□□□□□ -0.6
EDEM1-202ENST00000434243 PNPP00491 289 aa11.3□□□□□ -0.6
EDEM1-202ENST00000434243 TNFSF4P23510 183 aa11.3□□□□□ -0.6
EDEM1-202ENST00000434243 MSX2P35548 267 aaPredicted RBP11.3□□□□□ -0.6
EDEM1-202ENST00000434243 SMIM11AP58511 58 aa11.3□□□□□ -0.6
EDEM1-202ENST00000434243 SCGB2A2Q13296 93 aa11.3□□□□□ -0.6
EDEM1-202ENST00000434243 DNM1P34Q6PK57 102 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms