RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 ERVFC1-1P60608 527 aa12.74□□□□□ -0.37
RERE-204ENST00000400908 SMN1Q16637 294 aaKnown RBP12.74□□□□□ -0.37
RERE-204ENST00000400908 RTL8BQ17RB0 113 aa12.74□□□□□ -0.37
RERE-204ENST00000400908 OR5AP2Q8NGF4 316 aa12.74□□□□□ -0.37
RERE-204ENST00000400908 SLC39A7Q92504 469 aa12.74□□□□□ -0.37
RERE-204ENST00000400908 UCN3Q969E3 161 aa12.74□□□□□ -0.37
RERE-204ENST00000400908 SPOCK3Q9BQ16 436 aa12.74□□□□□ -0.37
RERE-204ENST00000400908 BCO1Q9HAY6 547 aa12.74□□□□□ -0.37
RERE-204ENST00000400908 PADI1Q9ULC6 663 aa12.74□□□□□ -0.37
RERE-204ENST00000400908 H7C1C5 153 aa12.74□□□□□ -0.37
RERE-204ENST00000400908 SEMA4FO95754 770 aa12.74□□□□□ -0.37
RERE-204ENST00000400908 DRAM2Q6UX65 266 aa12.74□□□□□ -0.37
RERE-204ENST00000400908 SSSCA1O60232 199 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 RPL29P47914 159 aaKnown RBP12.73□□□□□ -0.37
RERE-204ENST00000400908 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.73□□□□□ -0.37
RERE-204ENST00000400908 SLC46A1Q96NT5 459 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 SLC22A12Q96S37 553 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 ZNF256Q9Y2P7 627 aaPredicted RBP12.73□□□□□ -0.37
RERE-204ENST00000400908 GPX3P22352 226 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 SLC5A2P31639 672 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 SLC6A11P48066 632 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 ARSDP51689 593 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 SLC39A5Q6ZMH5 540 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 UTP4Q969X6 686 aaKnown RBP12.73□□□□□ -0.37
RERE-204ENST00000400908 TMEM230Q96A57 120 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 PLEKHA2Q9HB19 425 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 DOCK2Q92608 1830 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 NSG1A0A0A6YYJ2 146 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 GABRR3A8MPY1 467 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 COX7A2P2O60397 106 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 RAF1P04049 648 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 NDUFB7P17568 137 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 PAX5Q02548 391 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 NXNL2Q5VZ03 156 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 OR5M10Q6IEU7 315 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 SHISA6Q6ZSJ9 500 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 CLRN3Q8NCR9 226 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 NMNAT3Q96T66 252 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 ZMAT3Q9HA38 289 aaKnown RBP12.73□□□□□ -0.37
RERE-204ENST00000400908 G3V2L1 256 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 ZNF264O43296 627 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 WNT11O96014 354 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 OR4A4PQ8NGN8 299 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 PINX1Q96BK5 328 aaKnown RBP12.73□□□□□ -0.37
RERE-204ENST00000400908 ZNF778Q96MU6 729 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 DIMT1Q9UNQ2 313 aaKnown RBP12.73□□□□□ -0.37
RERE-204ENST00000400908 NPIPB15A6NHN6 443 aaPredicted RBP12.73□□□□□ -0.37
RERE-204ENST00000400908 WDR88Q6ZMY6 472 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 FAM71CQ8NEG0 241 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 OR10D4PQ8NGN7 298 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 CMTM3Q96MX0 182 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 MACROD1Q9BQ69 325 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 FLVCR1Q9Y5Y0 555 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 BCORQ6W2J9 1755 aa12.73□□□□□ -0.37
RERE-204ENST00000400908 RPL12P30050 165 aaKnown RBP12.72□□□□□ -0.37
RERE-204ENST00000400908 NTSR1P30989 418 aa12.72□□□□□ -0.37
RERE-204ENST00000400908 TFAP2EQ6VUC0 442 aa12.72□□□□□ -0.37
RERE-204ENST00000400908 LYSMD2Q8IV50 215 aa12.72□□□□□ -0.37
RERE-204ENST00000400908 OR2T6Q8NHC8 308 aa12.72□□□□□ -0.37
RERE-204ENST00000400908 TIMD4Q96H15 378 aa12.72□□□□□ -0.37
RERE-204ENST00000400908 STARD5Q9NSY2 213 aa12.72□□□□□ -0.37
RERE-204ENST00000400908 ACSS1Q9NUB1 689 aaPredicted RBP12.72□□□□□ -0.37
RERE-204ENST00000400908 PSORS1C1Q9UIG5 152 aa12.72□□□□□ -0.37
RERE-204ENST00000400908 J3KTA2 159 aa12.72□□□□□ -0.37
RERE-204ENST00000400908 CST2P09228 141 aa12.72□□□□□ -0.37
RERE-204ENST00000400908 MAP2K6P52564 334 aa12.72□□□□□ -0.37
RERE-204ENST00000400908 TEKQ02763 1124 aa12.72□□□□□ -0.37
RERE-204ENST00000400908 CIB3Q96Q77 187 aaPredicted RBP12.72□□□□□ -0.37
RERE-204ENST00000400908 ESRP2Q9H6T0 727 aaKnown RBP12.72□□□□□ -0.37
RERE-204ENST00000400908 NSG2Q9Y328 171 aa12.72□□□□□ -0.37
RERE-204ENST00000400908 H3BVH4 76 aa12.72□□□□□ -0.37
RERE-204ENST00000400908 TOX3O15405 576 aaPredicted RBP12.72□□□□□ -0.37
RERE-204ENST00000400908 Q3ZCU0 254 aa12.72□□□□□ -0.37
RERE-204ENST00000400908 MRPL2Q5T653 305 aaKnown RBP12.72□□□□□ -0.37
RERE-204ENST00000400908 GSTO2Q9H4Y5 243 aa12.72□□□□□ -0.37
RERE-204ENST00000400908 CDCP1Q9H5V8 836 aa12.72□□□□□ -0.37
RERE-204ENST00000400908 SLCO1B1Q9Y6L6 691 aa12.72□□□□□ -0.37
RERE-204ENST00000400908 CPMP14384 443 aa12.72□□□□□ -0.37
RERE-204ENST00000400908 TBC1D28Q2M2D7 210 aa12.72□□□□□ -0.37
RERE-204ENST00000400908 OR1J1Q8NGS3 322 aa12.72□□□□□ -0.37
RERE-204ENST00000400908 WDR83Q9BRX9 315 aaKnown RBP12.72□□□□□ -0.37
RERE-204ENST00000400908 EGLN1Q9GZT9 426 aa12.72□□□□□ -0.37
RERE-204ENST00000400908 LRIT1Q9P2V4 623 aa12.72□□□□□ -0.37
RERE-204ENST00000400908 ZCWPW2A0A1B0GU75 182 aa12.71□□□□□ -0.37
RERE-204ENST00000400908 DOK2O60496 412 aa12.71□□□□□ -0.37
RERE-204ENST00000400908 GASTP01350 101 aa12.71□□□□□ -0.37
RERE-204ENST00000400908 GRPP07492 148 aa12.71□□□□□ -0.37
RERE-204ENST00000400908 GPR12P47775 334 aa12.71□□□□□ -0.37
RERE-204ENST00000400908 CST9Q5W186 159 aa12.71□□□□□ -0.37
RERE-204ENST00000400908 SCD5Q86SK9 330 aa12.71□□□□□ -0.37
RERE-204ENST00000400908 OR10AD1Q8NGE0 317 aa12.71□□□□□ -0.37
RERE-204ENST00000400908 DLL4Q9NR61 685 aa12.71□□□□□ -0.37
RERE-204ENST00000400908 TRBV4-1A0A0J9YWV2 114 aa12.71□□□□□ -0.37
RERE-204ENST00000400908 TMX2-CTNND1H3BSU7 103 aa12.71□□□□□ -0.37
RERE-204ENST00000400908 CSO75390 466 aaKnown RBP12.71□□□□□ -0.37
RERE-204ENST00000400908 FPR3P25089 353 aa12.71□□□□□ -0.37
RERE-204ENST00000400908 ELAVL4P26378 380 aaKnown RBP12.71□□□□□ -0.37
RERE-204ENST00000400908 PCBP4P57723 403 aaKnown RBP12.71□□□□□ -0.37
RERE-204ENST00000400908 LRRC26Q2I0M4 334 aa12.71□□□□□ -0.37
RERE-204ENST00000400908 LEXMQ3ZCV2 418 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms