RNA–Protein interactions for RNA: ENST00000400183.6

USP25-204, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-204ENST00000400183 GABARAPL3Q9BY60 117 aa16.9■□□□□ 0.3
USP25-204ENST00000400183 PATZ1Q9HBE1 687 aaKnown RBP16.9■□□□□ 0.3
USP25-204ENST00000400183 POLDIP2Q9Y2S7 368 aa16.9■□□□□ 0.3
USP25-204ENST00000400183 KLF13Q9Y2Y9 288 aaPredicted RBP16.9■□□□□ 0.3
USP25-204ENST00000400183 RP1L1Q8IWN7 2480 aaPredicted RBP16.9■□□□□ 0.3
USP25-204ENST00000400183 APOA2P02652 100 aa16.89■□□□□ 0.3
USP25-204ENST00000400183 GLAP06280 429 aa16.89■□□□□ 0.3
USP25-204ENST00000400183 ADGRF3Q8IZF5 1079 aa16.89■□□□□ 0.3
USP25-204ENST00000400183 OPALINQ96PE5 141 aa16.89■□□□□ 0.3
USP25-204ENST00000400183 CDCA4Q9BXL8 241 aa16.89■□□□□ 0.3
USP25-204ENST00000400183 BCL2L10Q9HD36 194 aa16.89■□□□□ 0.3
USP25-204ENST00000400183 SLC25A37Q9NYZ2 338 aa16.89■□□□□ 0.3
USP25-204ENST00000400183 ZNF346Q9UL40 294 aaKnown RBP16.89■□□□□ 0.3
USP25-204ENST00000400183 SLCO1B1Q9Y6L6 691 aa16.89■□□□□ 0.3
USP25-204ENST00000400183 ST8SIA3O43173 380 aa16.89■□□□□ 0.29
USP25-204ENST00000400183 SIX6O95475 246 aa16.89■□□□□ 0.29
USP25-204ENST00000400183 LAP3P28838 519 aa16.89■□□□□ 0.29
USP25-204ENST00000400183 PGFP49763 221 aa16.89■□□□□ 0.29
USP25-204ENST00000400183 OR8G1Q15617 311 aa16.89■□□□□ 0.29
USP25-204ENST00000400183 THEM4Q5T1C6 240 aa16.89■□□□□ 0.29
USP25-204ENST00000400183 YIPF5Q969M3 257 aa16.89■□□□□ 0.29
USP25-204ENST00000400183 KIAA0100Q14667 2235 aaKnown RBP16.89■□□□□ 0.29
USP25-204ENST00000400183 KLK8O60259 260 aa16.89■□□□□ 0.29
USP25-204ENST00000400183 CAPZBP47756 277 aa16.89■□□□□ 0.29
USP25-204ENST00000400183 GP2P55259 537 aaKnown RBP16.89■□□□□ 0.29
USP25-204ENST00000400183 CPEB2Q7Z5Q1 589 aaKnown RBP16.89■□□□□ 0.29
USP25-204ENST00000400183 OR51H1Q8NH63 302 aa16.89■□□□□ 0.29
USP25-204ENST00000400183 ZAR1LA6NP61 321 aa16.89■□□□□ 0.29
USP25-204ENST00000400183 SULT1C4O75897 302 aa16.89■□□□□ 0.29
USP25-204ENST00000400183 NDUFB7P17568 137 aa16.89■□□□□ 0.29
USP25-204ENST00000400183 PRPH2P23942 346 aa16.89■□□□□ 0.29
USP25-204ENST00000400183 H2BFWTQ7Z2G1 175 aa16.89■□□□□ 0.29
USP25-204ENST00000400183 CA13Q8N1Q1 262 aa16.89■□□□□ 0.29
USP25-204ENST00000400183 OR10R2Q8NGX6 335 aa16.89■□□□□ 0.29
USP25-204ENST00000400183 PLK3Q9H4B4 646 aa16.89■□□□□ 0.29
USP25-204ENST00000400183 SMCO4Q9NRQ5 59 aa16.89■□□□□ 0.29
USP25-204ENST00000400183 IMPA2O14732 288 aa16.89■□□□□ 0.29
USP25-204ENST00000400183 FCMRO60667 390 aa16.89■□□□□ 0.29
USP25-204ENST00000400183 SRP9P49458 86 aaKnown RBP16.89■□□□□ 0.29
USP25-204ENST00000400183 RNF4P78317 190 aa16.89■□□□□ 0.29
USP25-204ENST00000400183 ZNF468Q5VIY5 522 aaPredicted RBP16.89■□□□□ 0.29
USP25-204ENST00000400183 PURGQ9UJV8 347 aaKnown RBP16.89■□□□□ 0.29
USP25-204ENST00000400183 ZC3H12DA2A288 527 aaKnown RBP16.88■□□□□ 0.29
USP25-204ENST00000400183 HS3ST1O14792 307 aa16.88■□□□□ 0.29
USP25-204ENST00000400183 IL34Q6ZMJ4 242 aa16.88■□□□□ 0.29
USP25-204ENST00000400183 OR5AS1Q8N127 324 aa16.88■□□□□ 0.29
USP25-204ENST00000400183 CPEB3Q8NE35 698 aaKnown RBP16.88■□□□□ 0.29
USP25-204ENST00000400183 ZC3HAV1LQ96H79 300 aaKnown RBP16.88■□□□□ 0.29
USP25-204ENST00000400183 MBOAT4Q96T53 435 aa16.88■□□□□ 0.29
USP25-204ENST00000400183 A0A087WV62 115 aa16.88■□□□□ 0.29
USP25-204ENST00000400183 SCGB1D1O95968 90 aa16.88■□□□□ 0.29
USP25-204ENST00000400183 LALBAP00709 142 aa16.88■□□□□ 0.29
USP25-204ENST00000400183 NKX2-1P43699 371 aaPredicted RBP16.88■□□□□ 0.29
USP25-204ENST00000400183 GABRA4P48169 554 aa16.88■□□□□ 0.29
USP25-204ENST00000400183 DEFA6Q01524 100 aa16.88■□□□□ 0.29
USP25-204ENST00000400183 SOWAHCQ53LP3 525 aaPredicted RBP16.88■□□□□ 0.29
USP25-204ENST00000400183 SYS1Q8N2H4 156 aa16.88■□□□□ 0.29
USP25-204ENST00000400183 TIMD4Q96H15 378 aa16.88■□□□□ 0.29
USP25-204ENST00000400183 ZCCHC4Q9H5U6 513 aa16.88■□□□□ 0.29
USP25-204ENST00000400183 UBE2ZQ9H832 354 aaPredicted RBP16.88■□□□□ 0.29
USP25-204ENST00000400183 ASB1Q9Y576 335 aa16.88■□□□□ 0.29
USP25-204ENST00000400183 OR8G2PQ6IF36 304 aa16.88■□□□□ 0.29
USP25-204ENST00000400183 PLXDC2Q6UX71 529 aa16.88■□□□□ 0.29
USP25-204ENST00000400183 OR51F2Q8NH61 342 aa16.88■□□□□ 0.29
USP25-204ENST00000400183 C16orf52Q8NHV5 167 aa16.88■□□□□ 0.29
USP25-204ENST00000400183 MITD1Q8WV92 249 aa16.88■□□□□ 0.29
USP25-204ENST00000400183 NXPH3O95157 252 aa16.88■□□□□ 0.29
USP25-204ENST00000400183 TRAPPC2P0DI81 140 aa16.88■□□□□ 0.29
USP25-204ENST00000400183 TRAPPC2BP0DI82 140 aa16.88■□□□□ 0.29
USP25-204ENST00000400183 CPEP16870 476 aa16.88■□□□□ 0.29
USP25-204ENST00000400183 MRGPRX1Q96LB2 322 aa16.88■□□□□ 0.29
USP25-204ENST00000400183 M0R135 149 aa16.87■□□□□ 0.29
USP25-204ENST00000400183 HEXAP06865 529 aa16.87■□□□□ 0.29
USP25-204ENST00000400183 FABP1P07148 127 aa16.87■□□□□ 0.29
USP25-204ENST00000400183 RPL18Q07020 188 aaKnown RBP16.87■□□□□ 0.29
USP25-204ENST00000400183 FAM122BQ7Z309 247 aa16.87■□□□□ 0.29
USP25-204ENST00000400183 TDHQ8IZJ6 230 aa16.87■□□□□ 0.29
USP25-204ENST00000400183 CISD2Q8N5K1 135 aaKnown RBP16.87■□□□□ 0.29
USP25-204ENST00000400183 OR52I2Q8NH67 350 aa16.87■□□□□ 0.29
USP25-204ENST00000400183 ZNF799Q96GE5 643 aa16.87■□□□□ 0.29
USP25-204ENST00000400183 NDUFB11Q9NX14 153 aa16.87■□□□□ 0.29
USP25-204ENST00000400183 CHST2Q9Y4C5 530 aa16.87■□□□□ 0.29
USP25-204ENST00000400183 A0A1W2PNR3 127 aa16.87■□□□□ 0.29
USP25-204ENST00000400183 K7EQM0 130 aa16.87■□□□□ 0.29
USP25-204ENST00000400183 PRRG2O14669 202 aa16.87■□□□□ 0.29
USP25-204ENST00000400183 CNIH1O95406 144 aa16.87■□□□□ 0.29
USP25-204ENST00000400183 ALOX5APP20292 161 aa16.87■□□□□ 0.29
USP25-204ENST00000400183 KIR2DL3P43628 341 aa16.87■□□□□ 0.29
USP25-204ENST00000400183 DOC2BQ14184 412 aa16.87■□□□□ 0.29
USP25-204ENST00000400183 OR2AE1Q8NHA4 323 aa16.87■□□□□ 0.29
USP25-204ENST00000400183 TSLPQ969D9 159 aa16.87■□□□□ 0.29
USP25-204ENST00000400183 RIMS4Q9H426 269 aaPredicted RBP16.87■□□□□ 0.29
USP25-204ENST00000400183 CRLF2Q9HC73 371 aa16.87■□□□□ 0.29
USP25-204ENST00000400183 PMS2P1A4D2B8 440 aa16.87■□□□□ 0.29
USP25-204ENST00000400183 DSCR3O14972 297 aa16.87■□□□□ 0.29
USP25-204ENST00000400183 BSGP35613 385 aa16.87■□□□□ 0.29
USP25-204ENST00000400183 BTG2P78543 158 aa16.87■□□□□ 0.29
USP25-204ENST00000400183 LFNGQ8NES3 379 aa16.87■□□□□ 0.29
USP25-204ENST00000400183 OR13C8Q8NGS7 320 aa16.87■□□□□ 0.29
USP25-204ENST00000400183 SCARB1Q8WTV0 552 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms