RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 GJC3Q8NFK1 279 aa14.94□□□□□ -0.02
RGP1-201ENST00000378078 OR5M8Q8NGP6 311 aa14.94□□□□□ -0.02
RGP1-201ENST00000378078 C20orf85Q9H1P6 137 aa14.94□□□□□ -0.02
RGP1-201ENST00000378078 TAF9BQ9HBM6 251 aa14.94□□□□□ -0.02
RGP1-201ENST00000378078 LPAR2Q9HBW0 351 aa14.94□□□□□ -0.02
RGP1-201ENST00000378078 CTDSP2O14595 271 aa14.93□□□□□ -0.02
RGP1-201ENST00000378078 HLA-HP01893 362 aa14.93□□□□□ -0.02
RGP1-201ENST00000378078 GABRB3P28472 473 aa14.93□□□□□ -0.02
RGP1-201ENST00000378078 YPEL5P62699 121 aa14.93□□□□□ -0.02
RGP1-201ENST00000378078 ISL2Q96A47 359 aa14.93□□□□□ -0.02
RGP1-201ENST00000378078 LYSMD1Q96S90 227 aa14.93□□□□□ -0.02
RGP1-201ENST00000378078 SPINK4O60575 86 aa14.93□□□□□ -0.02
RGP1-201ENST00000378078 ADH4P08319 380 aa14.93□□□□□ -0.02
RGP1-201ENST00000378078 COX7A1P24310 79 aa14.93□□□□□ -0.02
RGP1-201ENST00000378078 RACK1P63244 317 aaKnown RBP14.93□□□□□ -0.02
RGP1-201ENST00000378078 HSF1Q00613 529 aa14.93□□□□□ -0.02
RGP1-201ENST00000378078 TRMT12Q53H54 448 aaKnown RBP14.93□□□□□ -0.02
RGP1-201ENST00000378078 HIST2H3AQ71DI3 136 aa14.93□□□□□ -0.02
RGP1-201ENST00000378078 PGBD5Q8N414 524 aa14.93□□□□□ -0.02
RGP1-201ENST00000378078 BLNKQ8WV28 456 aa14.93□□□□□ -0.02
RGP1-201ENST00000378078 ZNF230Q9UIE0 474 aaPredicted RBP14.93□□□□□ -0.02
RGP1-201ENST00000378078 EXO1Q9UQ84 846 aaKnown RBP14.93□□□□□ -0.02
RGP1-201ENST00000378078 UGT2A1Q9Y4X1 527 aa14.93□□□□□ -0.02
RGP1-201ENST00000378078 OR2M5A3KFT3 312 aa14.93□□□□□ -0.02
RGP1-201ENST00000378078 SNNO75324 88 aaPredicted RBP14.93□□□□□ -0.02
RGP1-201ENST00000378078 DPH3Q96FX2 82 aa14.93□□□□□ -0.02
RGP1-201ENST00000378078 UBE2ZQ9H832 354 aaPredicted RBP14.93□□□□□ -0.02
RGP1-201ENST00000378078 PLEKHF2Q9H8W4 249 aa14.93□□□□□ -0.02
RGP1-201ENST00000378078 EXOSC3Q9NQT5 275 aaKnown RBP14.93□□□□□ -0.02
RGP1-201ENST00000378078 DRGXA6NNA5 263 aa14.93□□□□□ -0.02
RGP1-201ENST00000378078 ALDOCP09972 364 aaKnown RBP14.93□□□□□ -0.02
RGP1-201ENST00000378078 C7P10643 843 aa14.93□□□□□ -0.02
RGP1-201ENST00000378078 RPS27P42677 84 aaKnown RBP14.93□□□□□ -0.02
RGP1-201ENST00000378078 STEAP1BQ6NZ63 245 aa14.93□□□□□ -0.02
RGP1-201ENST00000378078 TSLPQ969D9 159 aa14.93□□□□□ -0.02
RGP1-201ENST00000378078 KIRREL1Q96J84 757 aa14.93□□□□□ -0.02
RGP1-201ENST00000378078 ZNF2Q9BSG1 426 aaPredicted RBP14.93□□□□□ -0.02
RGP1-201ENST00000378078 MUTYHQ9UIF7 546 aa14.93□□□□□ -0.02
RGP1-201ENST00000378078 MMACHCQ9Y4U1 282 aa14.93□□□□□ -0.02
RGP1-201ENST00000378078 SLCO1B1Q9Y6L6 691 aa14.93□□□□□ -0.02
RGP1-201ENST00000378078 LINC01553A4QN01 128 aa14.93□□□□□ -0.02
RGP1-201ENST00000378078 SRMP19623 302 aa14.93□□□□□ -0.02
RGP1-201ENST00000378078 ADPRHP54922 357 aa14.93□□□□□ -0.02
RGP1-201ENST00000378078 PRDX4Q13162 271 aa14.93□□□□□ -0.02
RGP1-201ENST00000378078 RPS19BP1Q86WX3 136 aaKnown RBP14.93□□□□□ -0.02
RGP1-201ENST00000378078 SLC46A1Q96NT5 459 aa14.93□□□□□ -0.02
RGP1-201ENST00000378078 C12orf10Q9HB07 376 aa14.93□□□□□ -0.02
RGP1-201ENST00000378078 TRAPPC4Q9Y296 219 aa14.93□□□□□ -0.02
RGP1-201ENST00000378078 ZNF487B1APH4 448 aa14.92□□□□□ -0.02
RGP1-201ENST00000378078 M0R082 166 aa14.92□□□□□ -0.02
RGP1-201ENST00000378078 SNCGO76070 127 aa14.92□□□□□ -0.02
RGP1-201ENST00000378078 TMEM65Q6PI78 240 aa14.92□□□□□ -0.02
RGP1-201ENST00000378078 TSEN54Q7Z6J9 526 aaKnown RBP14.92□□□□□ -0.02
RGP1-201ENST00000378078 SLC16A6O15403 523 aa14.92□□□□□ -0.02
RGP1-201ENST00000378078 EIF1BO60739 113 aaKnown RBP14.92□□□□□ -0.02
RGP1-201ENST00000378078 ERHP84090 104 aaKnown RBP14.92□□□□□ -0.02
RGP1-201ENST00000378078 SIAH3Q8IW03 269 aa14.92□□□□□ -0.02
RGP1-201ENST00000378078 OR10R2Q8NGX6 335 aa14.92□□□□□ -0.02
RGP1-201ENST00000378078 NXF2Q9GZY0 626 aaKnown RBP14.92□□□□□ -0.02
RGP1-201ENST00000378078 CHST8Q9H2A9 424 aa14.92□□□□□ -0.02
RGP1-201ENST00000378078 KCNIP2Q9NS61 270 aa14.92□□□□□ -0.02
RGP1-201ENST00000378078 UBE2MP61081 183 aaKnown RBP14.92□□□□□ -0.02
RGP1-201ENST00000378078 NKAIN1Q4KMZ8 207 aa14.92□□□□□ -0.02
RGP1-201ENST00000378078 VN1R2Q8NFZ6 395 aa14.92□□□□□ -0.02
RGP1-201ENST00000378078 FAM3DQ96BQ1 224 aa14.92□□□□□ -0.02
RGP1-201ENST00000378078 SRRQ9GZT4 340 aa14.92□□□□□ -0.02
RGP1-201ENST00000378078 VRTNQ9H8Y1 702 aa14.92□□□□□ -0.02
RGP1-201ENST00000378078 ASIC5Q9NY37 505 aa14.92□□□□□ -0.02
RGP1-201ENST00000378078 CLEC2DQ9UHP7 191 aa14.92□□□□□ -0.02
RGP1-201ENST00000378078 OR10A3P58181 314 aa14.92□□□□□ -0.02
RGP1-201ENST00000378078 ACSM6Q6P461 480 aa14.92□□□□□ -0.02
RGP1-201ENST00000378078 RHOUQ7L0Q8 258 aa14.92□□□□□ -0.02
RGP1-201ENST00000378078 BCORP1Q8N888 145 aa14.92□□□□□ -0.02
RGP1-201ENST00000378078 PTTG1O95997 202 aa14.92□□□□□ -0.02
RGP1-201ENST00000378078 METTL15P1P0C7V9 234 aa14.92□□□□□ -0.02
RGP1-201ENST00000378078 SULT1A3P0DMM9 295 aa14.92□□□□□ -0.02
RGP1-201ENST00000378078 SULT1A4P0DMN0 295 aa14.92□□□□□ -0.02
RGP1-201ENST00000378078 HAAOP46952 286 aa14.92□□□□□ -0.02
RGP1-201ENST00000378078 COL19A1Q14993 1142 aa14.92□□□□□ -0.02
RGP1-201ENST00000378078 WFDC3Q8IUB2 231 aa14.92□□□□□ -0.02
RGP1-201ENST00000378078 MAML2Q8IZL2 1156 aaPredicted RBP14.92□□□□□ -0.02
RGP1-201ENST00000378078 RPL3LQ92901 407 aaKnown RBP14.92□□□□□ -0.02
RGP1-201ENST00000378078 RPUSD4Q96CM3 377 aaKnown RBP14.92□□□□□ -0.02
RGP1-201ENST00000378078 Q96M85 177 aa14.92□□□□□ -0.02
RGP1-201ENST00000378078 MAGT1Q9H0U3 335 aa14.92□□□□□ -0.02
RGP1-201ENST00000378078 ZNF724A8MTY0 619 aa14.92□□□□□ -0.02
RGP1-201ENST00000378078 DCTN6O00399 190 aa14.92□□□□□ -0.02
RGP1-201ENST00000378078 SFXN4Q6P4A7 337 aa14.92□□□□□ -0.02
RGP1-201ENST00000378078 H1FNTQ75WM6 255 aaPredicted RBP14.92□□□□□ -0.02
RGP1-201ENST00000378078 CCL17Q92583 94 aa14.92□□□□□ -0.02
RGP1-201ENST00000378078 NAA50Q9GZZ1 169 aaKnown RBP14.92□□□□□ -0.02
RGP1-201ENST00000378078 GATCO43716 136 aaKnown RBP14.91□□□□□ -0.02
RGP1-201ENST00000378078 PENKP01210 267 aaPredicted RBP14.91□□□□□ -0.02
RGP1-201ENST00000378078 NAGAP17050 411 aa14.91□□□□□ -0.02
RGP1-201ENST00000378078 RAB15P59190 212 aa14.91□□□□□ -0.02
RGP1-201ENST00000378078 SNTB1Q13884 538 aaKnown RBP14.91□□□□□ -0.02
RGP1-201ENST00000378078 HENMT1Q5T8I9 393 aaKnown RBP14.91□□□□□ -0.02
RGP1-201ENST00000378078 MDGA2Q7Z553 956 aa14.91□□□□□ -0.02
RGP1-201ENST00000378078 OR2T6Q8NHC8 308 aa14.91□□□□□ -0.02
RGP1-201ENST00000378078 WFDC5Q8TCV5 224 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms