RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 OR10K1Q8NGX5 313 aa17.56■□□□□ 0.4
CDK13-202ENST00000340829 ZNF254O75437 659 aa17.56■□□□□ 0.4
CDK13-202ENST00000340829 MFGE8Q08431 387 aaPredicted RBP17.56■□□□□ 0.4
CDK13-202ENST00000340829 ACSM1Q08AH1 577 aa17.56■□□□□ 0.4
CDK13-202ENST00000340829 SLC17A1Q14916 467 aa17.56■□□□□ 0.4
CDK13-202ENST00000340829 SSX1Q16384 188 aa17.56■□□□□ 0.4
CDK13-202ENST00000340829 TMPRSS11FQ6ZWK6 438 aa17.56■□□□□ 0.4
CDK13-202ENST00000340829 OR2G2Q8NGZ5 317 aa17.56■□□□□ 0.4
CDK13-202ENST00000340829 ZNF681Q96N22 645 aa17.56■□□□□ 0.4
CDK13-202ENST00000340829 OR5B12Q96R08 314 aa17.56■□□□□ 0.4
CDK13-202ENST00000340829 GUSBP08236 651 aa17.55■□□□□ 0.4
CDK13-202ENST00000340829 NAXDQ8IW45 347 aa17.55■□□□□ 0.4
CDK13-202ENST00000340829 CHRM2P08172 466 aa17.55■□□□□ 0.4
CDK13-202ENST00000340829 ZNF728P0DKX0 622 aa17.55■□□□□ 0.4
CDK13-202ENST00000340829 OMGP23515 440 aa17.55■□□□□ 0.4
CDK13-202ENST00000340829 OR10K2Q6IF99 312 aa17.55■□□□□ 0.4
CDK13-202ENST00000340829 BHLHE23Q8NDY6 225 aa17.55■□□□□ 0.4
CDK13-202ENST00000340829 ZNF223Q9UK11 482 aaPredicted RBP17.55■□□□□ 0.4
CDK13-202ENST00000340829 RHOUQ7L0Q8 258 aa17.55■□□□□ 0.4
CDK13-202ENST00000340829 FJX1Q86VR8 437 aa17.55■□□□□ 0.4
CDK13-202ENST00000340829 C12orf49Q9H741 205 aa17.55■□□□□ 0.4
CDK13-202ENST00000340829 TRAPPC2LQ9UL33 140 aa17.55■□□□□ 0.4
CDK13-202ENST00000340829 A0A1W2PS29 197 aa17.55■□□□□ 0.4
CDK13-202ENST00000340829 EPXP11678 715 aa17.55■□□□□ 0.4
CDK13-202ENST00000340829 NME1P15531 152 aaKnown RBP17.55■□□□□ 0.4
CDK13-202ENST00000340829 SELENBP1Q13228 472 aa17.55■□□□□ 0.4
CDK13-202ENST00000340829 EBPQ15125 230 aaKnown RBP17.55■□□□□ 0.4
CDK13-202ENST00000340829 PRICKLE4Q2TBC4 344 aa17.55■□□□□ 0.4
CDK13-202ENST00000340829 SPRED2Q7Z698 418 aa17.55■□□□□ 0.4
CDK13-202ENST00000340829 GPR173Q9NS66 373 aa17.55■□□□□ 0.4
CDK13-202ENST00000340829 OTOL1A6NHN0 477 aaPredicted RBP17.54■□□□□ 0.4
CDK13-202ENST00000340829 POU3F3P20264 500 aaPredicted RBP17.54■□□□□ 0.4
CDK13-202ENST00000340829 LAP3P28838 519 aa17.54■□□□□ 0.4
CDK13-202ENST00000340829 EIF2S3P41091 472 aaKnown RBP17.54■□□□□ 0.4
CDK13-202ENST00000340829 C2orf76Q3KRA6 126 aa17.54■□□□□ 0.4
CDK13-202ENST00000340829 CCDC74BQ96LY2 380 aa17.54■□□□□ 0.4
CDK13-202ENST00000340829 FER1L6-AS2Q96M78 137 aa17.54■□□□□ 0.4
CDK13-202ENST00000340829 B9D1Q9UPM9 204 aa17.54■□□□□ 0.4
CDK13-202ENST00000340829 IGHV5-51A0A0C4DH38 117 aa17.54■□□□□ 0.4
CDK13-202ENST00000340829 GABRB1P18505 474 aa17.54■□□□□ 0.4
CDK13-202ENST00000340829 CRYBB2P43320 205 aa17.54■□□□□ 0.4
CDK13-202ENST00000340829 RAD52P43351 418 aa17.54■□□□□ 0.4
CDK13-202ENST00000340829 UBE2MP61081 183 aaKnown RBP17.54■□□□□ 0.4
CDK13-202ENST00000340829 PLA2G7Q13093 441 aa17.54■□□□□ 0.4
CDK13-202ENST00000340829 OGFOD3Q6PK18 319 aa17.54■□□□□ 0.4
CDK13-202ENST00000340829 HRASLSQ9HDD0 168 aa17.54■□□□□ 0.4
CDK13-202ENST00000340829 MOSPD3O75425 235 aa17.54■□□□□ 0.4
CDK13-202ENST00000340829 LIMS3P0CW19 117 aa17.54■□□□□ 0.4
CDK13-202ENST00000340829 LIMS4P0CW20 117 aa17.54■□□□□ 0.4
CDK13-202ENST00000340829 FOXF1Q12946 379 aa17.54■□□□□ 0.4
CDK13-202ENST00000340829 BTN1A1Q13410 526 aa17.54■□□□□ 0.4
CDK13-202ENST00000340829 DYRK1AQ13627 763 aa17.54■□□□□ 0.4
CDK13-202ENST00000340829 ZNF74Q16587 644 aa17.54■□□□□ 0.4
CDK13-202ENST00000340829 LTC4SQ16873 150 aa17.54■□□□□ 0.4
CDK13-202ENST00000340829 THEM4Q5T1C6 240 aa17.54■□□□□ 0.4
CDK13-202ENST00000340829 TMEM71Q6P5X7 295 aa17.54■□□□□ 0.4
CDK13-202ENST00000340829 SEMA6DQ8NFY4 1073 aa17.54■□□□□ 0.4
CDK13-202ENST00000340829 OR52N5Q8NH56 324 aa17.54■□□□□ 0.4
CDK13-202ENST00000340829 DOK1Q99704 481 aa17.54■□□□□ 0.4
CDK13-202ENST00000340829 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.54■□□□□ 0.43e-6■■■■■ 28.9
CDK13-202ENST00000340829 C6orf15Q6UXA7 325 aaPredicted RBP17.54■□□□□ 0.4
CDK13-202ENST00000340829 JAM3Q9BX67 310 aa17.54■□□□□ 0.4
CDK13-202ENST00000340829 ACTL6BO94805 426 aa17.53■□□□□ 0.4
CDK13-202ENST00000340829 VAMP5O95183 116 aa17.53■□□□□ 0.4
CDK13-202ENST00000340829 GABRA2P47869 451 aa17.53■□□□□ 0.4
CDK13-202ENST00000340829 ZIC1Q15915 447 aa17.53■□□□□ 0.4
CDK13-202ENST00000340829 IAH1Q2TAA2 248 aaPredicted RBP17.53■□□□□ 0.4
CDK13-202ENST00000340829 ARPC5LQ9BPX5 153 aa17.53■□□□□ 0.4
CDK13-202ENST00000340829 SLC25A31Q9H0C2 315 aa17.53■□□□□ 0.4
CDK13-202ENST00000340829 GPR84Q9NQS5 396 aa17.53■□□□□ 0.4
CDK13-202ENST00000340829 MDGA2Q7Z553 956 aa17.53■□□□□ 0.4
CDK13-202ENST00000340829 KMT5CQ86Y97 462 aa17.53■□□□□ 0.4
CDK13-202ENST00000340829 GABRG1Q8N1C3 465 aa17.53■□□□□ 0.4
CDK13-202ENST00000340829 GPBAR1Q8TDU6 330 aa17.53■□□□□ 0.4
CDK13-202ENST00000340829 LRRC46Q96FV0 321 aa17.53■□□□□ 0.4
CDK13-202ENST00000340829 FKBP2P26885 142 aaKnown RBP17.53■□□□□ 0.4
CDK13-202ENST00000340829 ETV6P41212 452 aa17.53■□□□□ 0.4
CDK13-202ENST00000340829 LUMP51884 338 aaPredicted RBP17.53■□□□□ 0.4
CDK13-202ENST00000340829 AADACL3Q5VUY0 350 aa17.53■□□□□ 0.4
CDK13-202ENST00000340829 VHLLQ6RSH7 139 aa17.53■□□□□ 0.4
CDK13-202ENST00000340829 LRRC3BQ96PB8 259 aa17.53■□□□□ 0.4
CDK13-202ENST00000340829 DNAJB12Q9NXW2 375 aaKnown RBP17.53■□□□□ 0.4
CDK13-202ENST00000340829 IGHV3-15A0A0B4J1V0 119 aa17.53■□□□□ 0.4
CDK13-202ENST00000340829 PIAS2O75928 621 aa17.53■□□□□ 0.4
CDK13-202ENST00000340829 ITGB2P05107 769 aa17.53■□□□□ 0.4
CDK13-202ENST00000340829 CT62P0C5K7 136 aa17.53■□□□□ 0.4
CDK13-202ENST00000340829 CLDN20P56880 219 aa17.53■□□□□ 0.4
CDK13-202ENST00000340829 OCSTAMPQ9BR26 566 aa17.53■□□□□ 0.4
CDK13-202ENST00000340829 B3GALT5Q9Y2C3 310 aa17.53■□□□□ 0.4
CDK13-202ENST00000340829 K7EQS6 105 aa17.52■□□□□ 0.4
CDK13-202ENST00000340829 KIR2DL3P43628 341 aa17.52■□□□□ 0.4
CDK13-202ENST00000340829 C3orf49Q96BT1 292 aa17.52■□□□□ 0.4
CDK13-202ENST00000340829 PHLDA2Q53GA4 152 aa17.52■□□□□ 0.4
CDK13-202ENST00000340829 LANCL3Q6ZV70 420 aa17.52■□□□□ 0.4
CDK13-202ENST00000340829 FAM60AQ9NP50 221 aa17.52■□□□□ 0.4
CDK13-202ENST00000340829 R4GMQ9 66 aa17.52■□□□□ 0.4
CDK13-202ENST00000340829 TRPM6Q9BX84 2022 aa17.52■□□□□ 0.4
CDK13-202ENST00000340829 C1orf196B1AJZ1 125 aa17.52■□□□□ 0.39
CDK13-202ENST00000340829 ZNF425Q6IV72 752 aa17.52■□□□□ 0.39
CDK13-202ENST00000340829 KIAA0907Q7Z7F0 614 aaPredicted RBP17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms