RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 SLC43A1O75387 559 aa18.71■□□□□ 0.59
VRK2-201ENST00000340157 DYNC1I2Q13409 638 aaKnown RBP18.71■□□□□ 0.59
VRK2-201ENST00000340157 DCTN2Q13561 401 aaKnown RBP18.71■□□□□ 0.59
VRK2-201ENST00000340157 ZNF416Q9BWM5 594 aa18.71■□□□□ 0.59
VRK2-201ENST00000340157 RBM24Q9BX46 236 aaKnown RBP18.71■□□□□ 0.59
VRK2-201ENST00000340157 C1orf198Q9H425 327 aa18.71■□□□□ 0.59
VRK2-201ENST00000340157 PNRC2Q9NPJ4 139 aaKnown RBP18.71■□□□□ 0.59
VRK2-201ENST00000340157 PAQR5Q9NXK6 330 aaPredicted RBP18.71■□□□□ 0.59
VRK2-201ENST00000340157 PCDHGA9Q9Y5G4 932 aaKnown RBP18.71■□□□□ 0.59
VRK2-201ENST00000340157 ATMQ13315 3056 aa18.7■□□□□ 0.58
VRK2-201ENST00000340157 GATBO75879 557 aaKnown RBP18.7■□□□□ 0.58
VRK2-201ENST00000340157 SYNGR4O95473 234 aa18.7■□□□□ 0.58
VRK2-201ENST00000340157 ENDOGQ14249 297 aaKnown RBP18.7■□□□□ 0.58
VRK2-201ENST00000340157 DEGS2Q6QHC5 323 aa18.7■□□□□ 0.58
VRK2-201ENST00000340157 CATSPERDQ86XM0 798 aa18.7■□□□□ 0.58
VRK2-201ENST00000340157 ZADH2Q8N4Q0 377 aa18.7■□□□□ 0.58
VRK2-201ENST00000340157 ORAI1Q96D31 301 aa18.7■□□□□ 0.58
VRK2-201ENST00000340157 ALKBH3Q96Q83 286 aaPredicted RBP18.7■□□□□ 0.58
VRK2-201ENST00000340157 TAAR6Q96RI8 345 aa18.7■□□□□ 0.58
VRK2-201ENST00000340157 NELFAQ9H3P2 528 aa18.7■□□□□ 0.58
VRK2-201ENST00000340157 PLGRKTQ9HBL7 147 aa18.7■□□□□ 0.58
VRK2-201ENST00000340157 CENPMQ9NSP4 180 aa18.7■□□□□ 0.58
VRK2-201ENST00000340157 MCTS1Q9ULC4 181 aaKnown RBP18.7■□□□□ 0.58
VRK2-201ENST00000340157 POLR1DQ9Y2S0 133 aa18.7■□□□□ 0.58
VRK2-201ENST00000340157 ARHGAP21Q5T5U3 1957 aa18.7■□□□□ 0.58
VRK2-201ENST00000340157 TRBV5-5A0A0J9YX44 114 aa18.69■□□□□ 0.58
VRK2-201ENST00000340157 ACOD1A6NK06 481 aa18.69■□□□□ 0.58
VRK2-201ENST00000340157 TMEM212A6NML5 194 aa18.69■□□□□ 0.58
VRK2-201ENST00000340157 ZNF879B4DU55 563 aa18.69■□□□□ 0.58
VRK2-201ENST00000340157 RER1O15258 196 aa18.69■□□□□ 0.58
VRK2-201ENST00000340157 ZNF254O75437 659 aa18.69■□□□□ 0.58
VRK2-201ENST00000340157 MSR1P21757 451 aa18.69■□□□□ 0.58
VRK2-201ENST00000340157 CCR9P51686 369 aa18.69■□□□□ 0.58
VRK2-201ENST00000340157 LSM6P62312 80 aaKnown RBP18.69■□□□□ 0.58
VRK2-201ENST00000340157 ZNF169Q14929 603 aaPredicted RBP18.69■□□□□ 0.58
VRK2-201ENST00000340157 SGCAQ16586 387 aa18.69■□□□□ 0.58
VRK2-201ENST00000340157 ODF4Q2M2E3 257 aa18.69■□□□□ 0.58
VRK2-201ENST00000340157 TUSC5Q8IXB3 177 aa18.69■□□□□ 0.58
VRK2-201ENST00000340157 OR51A4Q8NGJ6 313 aa18.69■□□□□ 0.58
VRK2-201ENST00000340157 DERL3Q96Q80 235 aa18.69■□□□□ 0.58
VRK2-201ENST00000340157 CRLF2Q9HC73 371 aa18.69■□□□□ 0.58
VRK2-201ENST00000340157 NOX4Q9NPH5 578 aa18.69■□□□□ 0.58
VRK2-201ENST00000340157 R4GMQ9 66 aa18.69■□□□□ 0.58
VRK2-201ENST00000340157 MED12LQ86YW9 2145 aa18.69■□□□□ 0.58
VRK2-201ENST00000340157 A0A0G2JK05 382 aa18.69■□□□□ 0.58
VRK2-201ENST00000340157 EIF2S3P41091 472 aaKnown RBP18.69■□□□□ 0.58
VRK2-201ENST00000340157 OR10A3P58181 314 aa18.69■□□□□ 0.58
VRK2-201ENST00000340157 SYT9Q86SS6 491 aa18.69■□□□□ 0.58
VRK2-201ENST00000340157 S100ZQ8WXG8 99 aa18.69■□□□□ 0.58
VRK2-201ENST00000340157 BCO1Q9HAY6 547 aa18.69■□□□□ 0.58
VRK2-201ENST00000340157 G6PC2Q9NQR9 355 aa18.69■□□□□ 0.58
VRK2-201ENST00000340157 CLEC4AQ9UMR7 237 aa18.69■□□□□ 0.58
VRK2-201ENST00000340157 EMC9Q9Y3B6 208 aa18.69■□□□□ 0.58
VRK2-201ENST00000340157 PEX16Q9Y5Y5 336 aa18.69■□□□□ 0.58
VRK2-201ENST00000340157 BSNQ9UPA5 3926 aa18.69■□□□□ 0.58
VRK2-201ENST00000340157 CACNA1GO43497 2377 aa18.68■□□□□ 0.58
VRK2-201ENST00000340157 ZNHIT1O43257 154 aa18.68■□□□□ 0.58
VRK2-201ENST00000340157 H2BFMP0C1H6 154 aa18.68■□□□□ 0.58
VRK2-201ENST00000340157 INAQ16352 499 aa18.68■□□□□ 0.58
VRK2-201ENST00000340157 PAMR1Q6UXH9 720 aa18.68■□□□□ 0.58
VRK2-201ENST00000340157 SIAH3Q8IW03 269 aa18.68■□□□□ 0.58
VRK2-201ENST00000340157 ZNF676Q8N7Q3 588 aa18.68■□□□□ 0.58
VRK2-201ENST00000340157 HMG20AQ9NP66 347 aa18.68■□□□□ 0.58
VRK2-201ENST00000340157 CAMK2AQ9UQM7 478 aa18.68■□□□□ 0.58
VRK2-201ENST00000340157 NOSIPQ9Y314 301 aaKnown RBP18.68■□□□□ 0.58
VRK2-201ENST00000340157 TRAV1-2A0A0B4J238 106 aa18.67■□□□□ 0.58
VRK2-201ENST00000340157 TGM6O95932 706 aa18.67■□□□□ 0.58
VRK2-201ENST00000340157 MYL9P24844 172 aa18.67■□□□□ 0.58
VRK2-201ENST00000340157 MRPS34P82930 218 aaKnown RBP18.67■□□□□ 0.58
VRK2-201ENST00000340157 ZNF846Q147U1 533 aa18.67■□□□□ 0.58
VRK2-201ENST00000340157 Q6ZS92 163 aa18.67■□□□□ 0.58
VRK2-201ENST00000340157 LAX1Q8IWV1 398 aa18.67■□□□□ 0.58
VRK2-201ENST00000340157 RBMXL3Q8N7X1 1067 aaKnown RBP18.67■□□□□ 0.58
VRK2-201ENST00000340157 OR2AJ1Q8NGZ0 328 aa18.67■□□□□ 0.58
VRK2-201ENST00000340157 BORCS5Q969J3 196 aa18.67■□□□□ 0.58
VRK2-201ENST00000340157 ATF6BQ99941 703 aa18.67■□□□□ 0.58
VRK2-201ENST00000340157 CRNNQ9UBG3 495 aaPredicted RBP18.67■□□□□ 0.58
VRK2-201ENST00000340157 A0A1B0GVC2 190 aa18.67■□□□□ 0.58
VRK2-201ENST00000340157 H3BSH0 61 aa18.67■□□□□ 0.58
VRK2-201ENST00000340157 GPR171O14626 319 aa18.67■□□□□ 0.58
VRK2-201ENST00000340157 Q499Y3 187 aa18.67■□□□□ 0.58
VRK2-201ENST00000340157 CEP78Q5JTW2 689 aa18.67■□□□□ 0.58
VRK2-201ENST00000340157 RIPPLY2Q5TAB7 128 aa18.67■□□□□ 0.58
VRK2-201ENST00000340157 TSPO2Q5TGU0 170 aa18.67■□□□□ 0.58
VRK2-201ENST00000340157 GPR137CQ8N3F9 429 aa18.67■□□□□ 0.58
VRK2-201ENST00000340157 WDR12Q9GZL7 423 aaKnown RBP18.67■□□□□ 0.58
VRK2-201ENST00000340157 COMMD4Q9H0A8 199 aa18.67■□□□□ 0.58
VRK2-201ENST00000340157 MIXL1Q9H2W2 232 aa18.67■□□□□ 0.58
VRK2-201ENST00000340157 RNF122Q9H9V4 155 aa18.67■□□□□ 0.58
VRK2-201ENST00000340157 CALHM2Q9HA72 323 aa18.67■□□□□ 0.58
VRK2-201ENST00000340157 B3GAT2Q9NPZ5 323 aa18.67■□□□□ 0.58
VRK2-201ENST00000340157 FAM206AQ9NX38 181 aa18.67■□□□□ 0.58
VRK2-201ENST00000340157 GTF2A1LQ9UNN4 478 aa18.67■□□□□ 0.58
VRK2-201ENST00000340157 ZNF724A8MTY0 619 aa18.66■□□□□ 0.58
VRK2-201ENST00000340157 ZNF878C9JN71 531 aa18.66■□□□□ 0.58
VRK2-201ENST00000340157 ARL6IP5O75915 188 aa18.66■□□□□ 0.58
VRK2-201ENST00000340157 S100A5P33763 92 aa18.66■□□□□ 0.58
VRK2-201ENST00000340157 ZNF84P51523 738 aa18.66■□□□□ 0.58
VRK2-201ENST00000340157 HSD17B12Q53GQ0 312 aa18.66■□□□□ 0.58
VRK2-201ENST00000340157 CCDC190Q86UF4 302 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms