RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 DHRS2Q13268 280 aa17.83■□□□□ 0.44
CRLF3-201ENST00000324238 FAM74A3Q4VXF1 159 aa17.83■□□□□ 0.44
CRLF3-201ENST00000324238 KIAA0895LQ68EN5 471 aa17.83■□□□□ 0.44
CRLF3-201ENST00000324238 UNQ6126/PRO20091Q6UXV3 157 aa17.83■□□□□ 0.44
CRLF3-201ENST00000324238 ZNF679Q8IYX0 411 aa17.83■□□□□ 0.44
CRLF3-201ENST00000324238 OR4D6Q8NGJ1 314 aa17.83■□□□□ 0.44
CRLF3-201ENST00000324238 ZNF471Q9BX82 626 aaPredicted RBP17.83■□□□□ 0.44
CRLF3-201ENST00000324238 PRODH2Q9UF12 536 aa17.83■□□□□ 0.44
CRLF3-201ENST00000324238 OR5H14A6NHG9 310 aa17.82■□□□□ 0.44
CRLF3-201ENST00000324238 SHISA8B8ZZ34 492 aa17.82■□□□□ 0.44
CRLF3-201ENST00000324238 P2RY10O00398 339 aa17.82■□□□□ 0.44
CRLF3-201ENST00000324238 NSA2O95478 260 aaKnown RBP17.82■□□□□ 0.44
CRLF3-201ENST00000324238 IL33O95760 270 aa17.82■□□□□ 0.44
CRLF3-201ENST00000324238 HLA-AP01891 365 aaKnown RBP17.82■□□□□ 0.44
CRLF3-201ENST00000324238 BGLAPP02818 100 aa17.82■□□□□ 0.44
CRLF3-201ENST00000324238 NAT1P18440 290 aa17.82■□□□□ 0.44
CRLF3-201ENST00000324238 IGLV3-21P80748 117 aaPredicted RBP17.82■□□□□ 0.44
CRLF3-201ENST00000324238 CDNFQ49AH0 187 aa17.82■□□□□ 0.44
CRLF3-201ENST00000324238 HDDC2Q7Z4H3 204 aa17.82■□□□□ 0.44
CRLF3-201ENST00000324238 OR13C3Q8NGS6 347 aa17.82■□□□□ 0.44
CRLF3-201ENST00000324238 ST8SIA2Q92186 375 aa17.82■□□□□ 0.44
CRLF3-201ENST00000324238 ZNF587Q96SQ5 575 aaPredicted RBP17.82■□□□□ 0.44
CRLF3-201ENST00000324238 MRI1Q9BV20 369 aa17.82■□□□□ 0.44
CRLF3-201ENST00000324238 DUSP15Q9H1R2 295 aaPredicted RBP17.82■□□□□ 0.44
CRLF3-201ENST00000324238 TAS2R8Q9NYW2 309 aa17.82■□□□□ 0.44
CRLF3-201ENST00000324238 PRR13Q9NZ81 148 aa17.82■□□□□ 0.44
CRLF3-201ENST00000324238 RABL2AQ9UBK7 228 aaPredicted RBP17.82■□□□□ 0.44
CRLF3-201ENST00000324238 RABL2BQ9UNT1 228 aa17.82■□□□□ 0.44
CRLF3-201ENST00000324238 HS3ST3A1Q9Y663 406 aa17.82■□□□□ 0.44
CRLF3-201ENST00000324238 TMEM14AQ9Y6G1 99 aa17.82■□□□□ 0.44
CRLF3-201ENST00000324238 IL12BP29460 328 aa17.82■□□□□ 0.44
CRLF3-201ENST00000324238 DNASE1L1P49184 302 aa17.82■□□□□ 0.44
CRLF3-201ENST00000324238 ARRB1P49407 418 aaPredicted RBP17.82■□□□□ 0.44
CRLF3-201ENST00000324238 CAPZA1P52907 286 aa17.82■□□□□ 0.44
CRLF3-201ENST00000324238 ATP1B3P54709 279 aa17.82■□□□□ 0.44
CRLF3-201ENST00000324238 SLC18B1Q6NT16 456 aa17.82■□□□□ 0.44
CRLF3-201ENST00000324238 TMED7Q9Y3B3 224 aa17.82■□□□□ 0.44
CRLF3-201ENST00000324238 IGKV1D-43A0A0B4J1Z2 117 aa17.82■□□□□ 0.44
CRLF3-201ENST00000324238 ZNF736B4DX44 427 aaPredicted RBP17.82■□□□□ 0.44
CRLF3-201ENST00000324238 EEF1E1-BLOC1S5C9J1V9 151 aa17.82■□□□□ 0.44
CRLF3-201ENST00000324238 TXNDC12O95881 172 aa17.82■□□□□ 0.44
CRLF3-201ENST00000324238 CYB5AP00167 134 aa17.82■□□□□ 0.44
CRLF3-201ENST00000324238 NAGAP17050 411 aa17.82■□□□□ 0.44
CRLF3-201ENST00000324238 PMPCAQ10713 525 aa17.82■□□□□ 0.44
CRLF3-201ENST00000324238 UBXN2BQ14CS0 331 aa17.82■□□□□ 0.44
CRLF3-201ENST00000324238 SLC41A2Q96JW4 573 aa17.82■□□□□ 0.44
CRLF3-201ENST00000324238 ADAT1Q9BUB4 502 aaKnown RBP17.82■□□□□ 0.44
CRLF3-201ENST00000324238 TBL1XR1Q9BZK7 514 aa17.82■□□□□ 0.44
CRLF3-201ENST00000324238 TAS2R3Q9NYW6 316 aa17.82■□□□□ 0.44
CRLF3-201ENST00000324238 EPHA6Q9UF33 1036 aa17.82■□□□□ 0.44
CRLF3-201ENST00000324238 A0A1W2PPC1 479 aa17.81■□□□□ 0.44
CRLF3-201ENST00000324238 WIPF3A6NGB9 483 aa17.81■□□□□ 0.44
CRLF3-201ENST00000324238 ITGB2P05107 769 aa17.81■□□□□ 0.44
CRLF3-201ENST00000324238 IGFBP4P22692 258 aa17.81■□□□□ 0.44
CRLF3-201ENST00000324238 VAMP1P23763 118 aa17.81■□□□□ 0.44
CRLF3-201ENST00000324238 CXADRP78310 365 aa17.81■□□□□ 0.44
CRLF3-201ENST00000324238 ZNF440Q8IYI8 595 aa17.81■□□□□ 0.44
CRLF3-201ENST00000324238 OR13C8Q8NGS7 320 aa17.81■□□□□ 0.44
CRLF3-201ENST00000324238 FBRSQ9HAH7 460 aa17.81■□□□□ 0.44
CRLF3-201ENST00000324238 OR5K4A6NMS3 321 aa17.81■□□□□ 0.44
CRLF3-201ENST00000324238 HPP00738 406 aa17.81■□□□□ 0.44
CRLF3-201ENST00000324238 STARP49675 285 aa17.81■□□□□ 0.44
CRLF3-201ENST00000324238 C15orf40Q8WUR7 153 aa17.81■□□□□ 0.44
CRLF3-201ENST00000324238 EMC6Q9BV81 110 aa17.81■□□□□ 0.44
CRLF3-201ENST00000324238 MED29Q9NX70 200 aa17.81■□□□□ 0.44
CRLF3-201ENST00000324238 LHX6Q9UPM6 363 aa17.81■□□□□ 0.44
CRLF3-201ENST00000324238 VSIG4Q9Y279 399 aa17.81■□□□□ 0.44
CRLF3-201ENST00000324238 THADAQ6YHU6 1953 aa17.81■□□□□ 0.44
CRLF3-201ENST00000324238 RFPL4AA6NLU0 287 aa17.8■□□□□ 0.44
CRLF3-201ENST00000324238 RFPL4AL1F8VTS6 287 aa17.8■□□□□ 0.44
CRLF3-201ENST00000324238 CD34P28906 385 aa17.8■□□□□ 0.44
CRLF3-201ENST00000324238 GNALP38405 381 aa17.8■□□□□ 0.44
CRLF3-201ENST00000324238 PPICP45877 212 aa17.8■□□□□ 0.44
CRLF3-201ENST00000324238 HSD17B7P56937 341 aa17.8■□□□□ 0.44
CRLF3-201ENST00000324238 CCINQ13939 588 aa17.8■□□□□ 0.44
CRLF3-201ENST00000324238 PXT1Q8NFP0 134 aa17.8■□□□□ 0.44
CRLF3-201ENST00000324238 RNF128Q8TEB7 428 aa17.8■□□□□ 0.44
CRLF3-201ENST00000324238 VRK1Q99986 396 aaPredicted RBP17.8■□□□□ 0.44
CRLF3-201ENST00000324238 AKR1C4P17516 323 aa17.8■□□□□ 0.44
CRLF3-201ENST00000324238 RIDAP52758 137 aaKnown RBP17.8■□□□□ 0.44
CRLF3-201ENST00000324238 TAS2R19P59542 299 aa17.8■□□□□ 0.44
CRLF3-201ENST00000324238 RPL27P61353 136 aaKnown RBP17.8■□□□□ 0.44
CRLF3-201ENST00000324238 OR7A5Q15622 319 aa17.8■□□□□ 0.44
CRLF3-201ENST00000324238 OVCH2Q7RTZ1 564 aa17.8■□□□□ 0.44
CRLF3-201ENST00000324238 DCXRQ7Z4W1 244 aa17.8■□□□□ 0.44
CRLF3-201ENST00000324238 PPP1R1CQ8WVI7 109 aa17.8■□□□□ 0.44
CRLF3-201ENST00000324238 C8orf44Q96CB5 159 aa17.8■□□□□ 0.44
CRLF3-201ENST00000324238 NUDT22Q9BRQ3 303 aa17.8■□□□□ 0.44
CRLF3-201ENST00000324238 ADAM19Q9H013 955 aa17.8■□□□□ 0.44
CRLF3-201ENST00000324238 CKLFQ9UBR5 152 aa17.8■□□□□ 0.44
CRLF3-201ENST00000324238 LOC107986453A0A1B0GWG9 222 aa17.79■□□□□ 0.44
CRLF3-201ENST00000324238 TMEM150CB9EJG8 249 aa17.79■□□□□ 0.44
CRLF3-201ENST00000324238 KRBOX1C9JBD0 128 aa17.79■□□□□ 0.44
CRLF3-201ENST00000324238 TOR1AO14656 332 aa17.79■□□□□ 0.44
CRLF3-201ENST00000324238 ZNF432O94892 652 aa17.79■□□□□ 0.44
CRLF3-201ENST00000324238 DCNP07585 359 aaKnown RBP17.79■□□□□ 0.44
CRLF3-201ENST00000324238 CTRB1P17538 263 aa17.79■□□□□ 0.44
CRLF3-201ENST00000324238 GLT8D1Q68CQ7 371 aa17.79■□□□□ 0.44
CRLF3-201ENST00000324238 CTRB2Q6GPI1 263 aa17.79■□□□□ 0.44
CRLF3-201ENST00000324238 FOXQ1Q9C009 403 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms