RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 SC5DO75845 299 aa11.47□□□□□ -0.57
VAMP7-201ENST00000262640 DCTDP32321 178 aa11.47□□□□□ -0.57
VAMP7-201ENST00000262640 SOX6P35712 828 aa11.47□□□□□ -0.57
VAMP7-201ENST00000262640 PLA2G5P39877 138 aa11.47□□□□□ -0.57
VAMP7-201ENST00000262640 CCR9P51686 369 aa11.47□□□□□ -0.57
VAMP7-201ENST00000262640 ENDOGQ14249 297 aaKnown RBP11.47□□□□□ -0.57
VAMP7-201ENST00000262640 INSL4Q14641 139 aa11.47□□□□□ -0.57
VAMP7-201ENST00000262640 YIF1BQ5BJH7 314 aa11.47□□□□□ -0.57
VAMP7-201ENST00000262640 TSPO2Q5TGU0 170 aa11.47□□□□□ -0.57
VAMP7-201ENST00000262640 FAM180AQ6UWF9 173 aa11.47□□□□□ -0.57
VAMP7-201ENST00000262640 CFAP77Q6ZQR2 320 aa11.47□□□□□ -0.57
VAMP7-201ENST00000262640 LINGO2Q7L985 606 aa11.47□□□□□ -0.57
VAMP7-201ENST00000262640 OR5AK2Q8NH90 309 aa11.47□□□□□ -0.57
VAMP7-201ENST00000262640 HTRA1Q92743 480 aa11.47□□□□□ -0.57
VAMP7-201ENST00000262640 ZNF837Q96EG3 531 aaPredicted RBP11.47□□□□□ -0.57
VAMP7-201ENST00000262640 GMPPAQ96IJ6 420 aaPredicted RBP11.47□□□□□ -0.57
VAMP7-201ENST00000262640 C4orf45Q96LM5 186 aa11.47□□□□□ -0.57
VAMP7-201ENST00000262640 GPR137Q96N19 417 aa11.47□□□□□ -0.57
VAMP7-201ENST00000262640 SLIRPQ9GZT3 109 aaKnown RBP11.47□□□□□ -0.57
VAMP7-201ENST00000262640 R4GMQ9 66 aa11.47□□□□□ -0.57
VAMP7-201ENST00000262640 TMEM212A6NML5 194 aa11.46□□□□□ -0.57
VAMP7-201ENST00000262640 OR4C45A6NMZ5 311 aa11.46□□□□□ -0.57
VAMP7-201ENST00000262640 AHRRA9YTQ3 701 aa11.46□□□□□ -0.57
VAMP7-201ENST00000262640 GATBO75879 557 aaKnown RBP11.46□□□□□ -0.57
VAMP7-201ENST00000262640 ZFPL1O95159 310 aa11.46□□□□□ -0.57
VAMP7-201ENST00000262640 CDRT1O95170 752 aa11.46□□□□□ -0.57
VAMP7-201ENST00000262640 AGTR1P30556 359 aa11.46□□□□□ -0.57
VAMP7-201ENST00000262640 RPS19P39019 145 aaKnown RBP11.46□□□□□ -0.57
VAMP7-201ENST00000262640 ROR2Q01974 943 aaKnown RBP11.46□□□□□ -0.57
VAMP7-201ENST00000262640 CEACAM16Q2WEN9 425 aa11.46□□□□□ -0.57
VAMP7-201ENST00000262640 ACSM3Q53FZ2 586 aa11.46□□□□□ -0.57
VAMP7-201ENST00000262640 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.46□□□□□ -0.57
VAMP7-201ENST00000262640 CEACAM19Q7Z692 300 aa11.46□□□□□ -0.57
VAMP7-201ENST00000262640 OR10S1Q8NGN2 331 aa11.46□□□□□ -0.57
VAMP7-201ENST00000262640 TRIB1Q96RU8 372 aa11.46□□□□□ -0.57
VAMP7-201ENST00000262640 COMMD4Q9H0A8 199 aa11.46□□□□□ -0.57
VAMP7-201ENST00000262640 DNAJC13O75165 2243 aa11.46□□□□□ -0.57
VAMP7-201ENST00000262640 C1QTNF9BB2RNN3 333 aa11.46□□□□□ -0.58
VAMP7-201ENST00000262640 RPL36A-HNRNPH2H7BZ11 118 aa11.46□□□□□ -0.58
VAMP7-201ENST00000262640 SS18L1O75177 396 aaPredicted RBP11.46□□□□□ -0.58
VAMP7-201ENST00000262640 SRSF10O75494 262 aaKnown RBP11.46□□□□□ -0.58
VAMP7-201ENST00000262640 CST2P09228 141 aa11.46□□□□□ -0.58
VAMP7-201ENST00000262640 C1QTNF9P0C862 333 aa11.46□□□□□ -0.58
VAMP7-201ENST00000262640 RPS11P62280 158 aaKnown RBP eCLIP11.46□□□□□ -0.58
VAMP7-201ENST00000262640 SF3B4Q15427 424 aaKnown RBP eCLIP11.46□□□□□ -0.589e-7■□□□□ 10.7
VAMP7-201ENST00000262640 ZNF829Q3KNS6 432 aaPredicted RBP11.46□□□□□ -0.58
VAMP7-201ENST00000262640 NRN1LQ496H8 165 aa11.46□□□□□ -0.58
VAMP7-201ENST00000262640 KRTCAP3Q53RY4 240 aa11.46□□□□□ -0.58
VAMP7-201ENST00000262640 KLHL24Q6TFL4 600 aa11.46□□□□□ -0.58
VAMP7-201ENST00000262640 ZNF100Q8IYN0 542 aa11.46□□□□□ -0.58
VAMP7-201ENST00000262640 PRSS35Q8N3Z0 413 aa11.46□□□□□ -0.58
VAMP7-201ENST00000262640 TEX19Q8NA77 164 aa11.46□□□□□ -0.58
VAMP7-201ENST00000262640 GJC3Q8NFK1 279 aa11.46□□□□□ -0.58
VAMP7-201ENST00000262640 OR5M9Q8NGP3 310 aa11.46□□□□□ -0.58
VAMP7-201ENST00000262640 FOXB1Q99853 325 aa11.46□□□□□ -0.58
VAMP7-201ENST00000262640 NIPAL2Q9H841 368 aa11.46□□□□□ -0.58
VAMP7-201ENST00000262640 SLC7A10Q9NS82 523 aa11.46□□□□□ -0.58
VAMP7-201ENST00000262640 LUZP4Q9P127 313 aa11.46□□□□□ -0.58
VAMP7-201ENST00000262640 TUBD1Q9UJT1 453 aa11.46□□□□□ -0.58
VAMP7-201ENST00000262640 A3GALT2U3KPV4 340 aa11.46□□□□□ -0.58
VAMP7-201ENST00000262640 PMF1-BGLAPU3KQ54 211 aa11.46□□□□□ -0.58
VAMP7-201ENST00000262640 ZNF587BE7ETH6 402 aa11.45□□□□□ -0.58
VAMP7-201ENST00000262640 PAX7P23759 505 aa11.45□□□□□ -0.58
VAMP7-201ENST00000262640 SDC2P34741 201 aa11.45□□□□□ -0.58
VAMP7-201ENST00000262640 KIR3DL2P43630 455 aa11.45□□□□□ -0.58
VAMP7-201ENST00000262640 HIST1H3AP68431 136 aa11.45□□□□□ -0.58
VAMP7-201ENST00000262640 ZMAT1Q5H9K5 638 aa11.45□□□□□ -0.58
VAMP7-201ENST00000262640 WDR38Q5JTN6 314 aa11.45□□□□□ -0.58
VAMP7-201ENST00000262640 HIST2H3PS2Q5TEC6 136 aa11.45□□□□□ -0.58
VAMP7-201ENST00000262640 UNQ6494/PRO21346Q6UXR6 183 aa11.45□□□□□ -0.58
VAMP7-201ENST00000262640 LINC00299Q6ZSB3 139 aa11.45□□□□□ -0.58
VAMP7-201ENST00000262640 HIST2H3AQ71DI3 136 aa11.45□□□□□ -0.58
VAMP7-201ENST00000262640 NUFIP2Q7Z417 695 aaKnown RBP11.45□□□□□ -0.58
VAMP7-201ENST00000262640 CATSPERDQ86XM0 798 aa11.45□□□□□ -0.58
VAMP7-201ENST00000262640 ZNF676Q8N7Q3 588 aa11.45□□□□□ -0.58
VAMP7-201ENST00000262640 OR13C5Q8NGS8 318 aa11.45□□□□□ -0.58
VAMP7-201ENST00000262640 TBC1D15Q8TC07 691 aa11.45□□□□□ -0.58
VAMP7-201ENST00000262640 PHYHIPQ92561 330 aa11.45□□□□□ -0.58
VAMP7-201ENST00000262640 WNT2BQ93097 391 aa11.45□□□□□ -0.58
VAMP7-201ENST00000262640 SNTG1Q9NSN8 517 aa11.45□□□□□ -0.58
VAMP7-201ENST00000262640 LOC110117498-PIK3R3F6TDL0 507 aa11.45□□□□□ -0.58
VAMP7-201ENST00000262640 TAF4O00268 1085 aa11.45□□□□□ -0.58
VAMP7-201ENST00000262640 RER1O15258 196 aa11.45□□□□□ -0.58
VAMP7-201ENST00000262640 MTNR1BP49286 362 aa11.45□□□□□ -0.58
VAMP7-201ENST00000262640 RORCP51449 518 aa11.45□□□□□ -0.58
VAMP7-201ENST00000262640 MFGE8Q08431 387 aaPredicted RBP11.45□□□□□ -0.58
VAMP7-201ENST00000262640 TAF13Q15543 124 aa11.45□□□□□ -0.58
VAMP7-201ENST00000262640 ZNF404Q494X3 552 aa11.45□□□□□ -0.58
VAMP7-201ENST00000262640 UNQ9370/PRO34162Q6UXP9 181 aa11.45□□□□□ -0.58
VAMP7-201ENST00000262640 LRRC18Q8N456 261 aa11.45□□□□□ -0.58
VAMP7-201ENST00000262640 MCFD2Q8NI22 146 aa11.45□□□□□ -0.58
VAMP7-201ENST00000262640 SLC25A46Q96AG3 418 aa11.45□□□□□ -0.58
VAMP7-201ENST00000262640 NXF2Q9GZY0 626 aaKnown RBP11.45□□□□□ -0.58
VAMP7-201ENST00000262640 MMP27Q9H306 513 aa11.45□□□□□ -0.58
VAMP7-201ENST00000262640 PNRC2Q9NPJ4 139 aaKnown RBP11.45□□□□□ -0.58
VAMP7-201ENST00000262640 ZNF71Q9NQZ8 489 aaPredicted RBP11.45□□□□□ -0.58
VAMP7-201ENST00000262640 UPB1Q9UBR1 384 aa11.45□□□□□ -0.58
VAMP7-201ENST00000262640 FBXL3Q9UKT7 428 aa11.45□□□□□ -0.58
VAMP7-201ENST00000262640 CASKO14936 926 aa11.44□□□□□ -0.58
VAMP7-201ENST00000262640 ARL6IP5O75915 188 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms