RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 BTN2A1Q7KYR7 527 aa4.98□□□□□ -1.61
CHD2-227ENST00000637572 AKAP14Q86UN6 197 aa4.98□□□□□ -1.61
CHD2-227ENST00000637572 LRRC28Q86X40 367 aaPredicted RBP4.98□□□□□ -1.61
CHD2-227ENST00000637572 SERPINA12Q8IW75 414 aa4.98□□□□□ -1.61
CHD2-227ENST00000637572 C9orf40Q8IXQ3 194 aa4.98□□□□□ -1.61
CHD2-227ENST00000637572 ZFP41Q8N8Y5 198 aa4.98□□□□□ -1.61
CHD2-227ENST00000637572 CPEB3Q8NE35 698 aaKnown RBP4.98□□□□□ -1.61
CHD2-227ENST00000637572 CSNK2A3Q8NEV1 391 aa4.98□□□□□ -1.61
CHD2-227ENST00000637572 NOXO1Q8NFA2 376 aa4.98□□□□□ -1.61
CHD2-227ENST00000637572 OR11L1Q8NGX0 322 aa4.98□□□□□ -1.61
CHD2-227ENST00000637572 TECTBQ96PL2 329 aa4.98□□□□□ -1.61
CHD2-227ENST00000637572 EMC7Q9NPA0 242 aa4.98□□□□□ -1.61
CHD2-227ENST00000637572 KLHL13Q9P2N7 655 aa4.98□□□□□ -1.61
CHD2-227ENST00000637572 KCNN3Q9UGI6 736 aa4.98□□□□□ -1.61
CHD2-227ENST00000637572 SPATA2Q9UM82 520 aa4.98□□□□□ -1.61
CHD2-227ENST00000637572 PTPRDP23468 1912 aa4.98□□□□□ -1.61
CHD2-227ENST00000637572 MTORP42345 2549 aa4.98□□□□□ -1.61
CHD2-227ENST00000637572 FUOMA2VDF0 154 aa4.98□□□□□ -1.61
CHD2-227ENST00000637572 SLC35F4A4IF30 521 aa4.98□□□□□ -1.61
CHD2-227ENST00000637572 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.98□□□□□ -1.61
CHD2-227ENST00000637572 GABRPO00591 440 aa4.98□□□□□ -1.61
CHD2-227ENST00000637572 CTSBP07858 339 aa4.98□□□□□ -1.61
CHD2-227ENST00000637572 ARSBP15848 533 aa4.98□□□□□ -1.61
CHD2-227ENST00000637572 BDKRB2P30411 391 aa4.98□□□□□ -1.61
CHD2-227ENST00000637572 SKP2Q13309 424 aa4.98□□□□□ -1.61
CHD2-227ENST00000637572 ZXDCQ2QGD7 858 aaPredicted RBP4.98□□□□□ -1.61
CHD2-227ENST00000637572 THOC7Q6I9Y2 204 aaKnown RBP4.98□□□□□ -1.61
CHD2-227ENST00000637572 DCXRQ7Z4W1 244 aa4.98□□□□□ -1.61
CHD2-227ENST00000637572 ATG4DQ86TL0 474 aaPredicted RBP4.98□□□□□ -1.61
CHD2-227ENST00000637572 SNX29P2Q8IUI4 249 aa4.98□□□□□ -1.61
CHD2-227ENST00000637572 SNRNP27Q8WVK2 155 aaKnown RBP4.98□□□□□ -1.61
CHD2-227ENST00000637572 GHSRQ92847 366 aa4.98□□□□□ -1.61
CHD2-227ENST00000637572 SLC52A3Q9NQ40 469 aa4.98□□□□□ -1.61
CHD2-227ENST00000637572 MALT1Q9UDY8 824 aa4.98□□□□□ -1.61
CHD2-227ENST00000637572 OR52A1Q9UKL2 312 aa4.98□□□□□ -1.61
CHD2-227ENST00000637572 KCNIP3Q9Y2W7 256 aa4.98□□□□□ -1.61
CHD2-227ENST00000637572 SESN1Q9Y6P5 492 aa4.98□□□□□ -1.61
CHD2-227ENST00000637572 CENPFP49454 3210 aa4.98□□□□□ -1.61
CHD2-227ENST00000637572 IGLV3-12A0A075B6K2 115 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 hCG_1807616A0A1W2PRN6 198 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 H7C1C5 153 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 M0R129 80 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 DOK2O60496 412 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 SEC14L2O76054 403 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 ATG12O94817 140 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 UBL3O95164 117 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 GABARAPO95166 117 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 PRSS3P35030 304 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 NCS1P62166 190 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 LCN6P62502 163 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 FAM57BQ71RH2 274 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 GPR155Q7Z3F1 870 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 SFTPA2Q8IWL1 248 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 Q8N402 240 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 TRMT10AQ8TBZ6 339 aaKnown RBP4.97□□□□□ -1.61
CHD2-227ENST00000637572 RNF166Q96A37 237 aaPredicted RBP4.97□□□□□ -1.61
CHD2-227ENST00000637572 TRIB1Q96RU8 372 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 NRTNQ99748 197 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 JAM3Q9BX67 310 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 METTL9Q9H1A3 318 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 ZNF442Q9H7R0 627 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 MED20Q9H944 212 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 GALNT9Q9HCQ5 603 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 GLTPQ9NZD2 209 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 NDRG3Q9UGV2 375 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 ZNF222Q9UK12 451 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 B9D1Q9UPM9 204 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 NLRC5Q86WI3 1866 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 EEF1E1-BLOC1S5C9J1V9 151 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 EEF1E1O43324 174 aaKnown RBP4.97□□□□□ -1.61
CHD2-227ENST00000637572 RBMXL2O75526 392 aaKnown RBP4.97□□□□□ -1.61
CHD2-227ENST00000637572 PMS2P2O95744 297 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 TFAP2AP05549 437 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 PSKH1P11801 424 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 ZNF35P13682 527 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 GALP22466 123 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 PTBP1P26599 531 aaKnown RBP eCLIP4.97□□□□□ -1.61
CHD2-227ENST00000637572 ETV6P41212 452 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 NR4A2P43354 598 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 ALDH3B2P48448 385 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 RIN1Q13671 783 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 NPSR1Q6W5P4 371 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 DCDC5Q6ZRR9 648 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 USP51Q70EK9 711 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 SLC22A24Q8N4F4 322 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 ADPRHL1Q8NDY3 354 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 TMEM52Q8NDY8 209 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 OR6M1Q8NGM8 313 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 KCNG3Q8TAE7 436 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 ABHD4Q8TB40 342 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 HTRA1Q92743 480 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 ITFG2Q969R8 447 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 ZNF845Q96IR2 970 aaPredicted RBP4.97□□□□□ -1.61
CHD2-227ENST00000637572 SEMA5BQ9P283 1151 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 RCE1Q9Y256 329 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 NTNG1Q9Y2I2 539 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 ITPR3Q14573 2671 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 ACOD1A6NK06 481 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 TRAPPC2LH3BP13 241 aa4.97□□□□□ -1.61
CHD2-227ENST00000637572 H7C1Q1 480 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms