RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 UGT2A3Q6UWM9 527 aa17.35■□□□□ 0.37
PDLIM2-221ENST00000622702 P2RY8Q86VZ1 359 aa17.35■□□□□ 0.37
PDLIM2-221ENST00000622702 SKA3Q8IX90 412 aa17.35■□□□□ 0.37
PDLIM2-221ENST00000622702 DMRTC2Q8IXT2 367 aaPredicted RBP17.35■□□□□ 0.37
PDLIM2-221ENST00000622702 INTS14Q96SY0 518 aa17.35■□□□□ 0.37
PDLIM2-221ENST00000622702 WACQ9BTA9 647 aa17.35■□□□□ 0.37
PDLIM2-221ENST00000622702 EMC7Q9NPA0 242 aa17.35■□□□□ 0.37
PDLIM2-221ENST00000622702 PLCXD1Q9NUJ7 323 aa17.35■□□□□ 0.37
PDLIM2-221ENST00000622702 RPL36Q9Y3U8 105 aaKnown RBP17.35■□□□□ 0.37
PDLIM2-221ENST00000622702 OR5H1A6NKK0 313 aa17.34■□□□□ 0.37
PDLIM2-221ENST00000622702 DBTP11182 482 aaKnown RBP17.34■□□□□ 0.37
PDLIM2-221ENST00000622702 ZNF823P16415 610 aa17.34■□□□□ 0.37
PDLIM2-221ENST00000622702 CSNK2BP67870 215 aa17.34■□□□□ 0.37
PDLIM2-221ENST00000622702 SORDQ00796 357 aa17.34■□□□□ 0.37
PDLIM2-221ENST00000622702 POU4F2Q12837 409 aa17.34■□□□□ 0.37
PDLIM2-221ENST00000622702 DPPA2Q7Z7J5 298 aa17.34■□□□□ 0.37
PDLIM2-221ENST00000622702 OR10H5Q8NGA6 315 aa17.34■□□□□ 0.37
PDLIM2-221ENST00000622702 MARVELD3Q96A59 401 aa17.34■□□□□ 0.37
PDLIM2-221ENST00000622702 SH3GL3Q99963 347 aa17.34■□□□□ 0.37
PDLIM2-221ENST00000622702 ZNF416Q9BWM5 594 aa17.34■□□□□ 0.37
PDLIM2-221ENST00000622702 ACTR6Q9GZN1 396 aa17.34■□□□□ 0.37
PDLIM2-221ENST00000622702 WDR76Q9H967 626 aa17.34■□□□□ 0.37
PDLIM2-221ENST00000622702 ADGRL4Q9HBW9 690 aa17.34■□□□□ 0.37
PDLIM2-221ENST00000622702 AMBNQ9NP70 447 aa17.34■□□□□ 0.37
PDLIM2-221ENST00000622702 OBP2BQ9NPH6 170 aa17.34■□□□□ 0.37
PDLIM2-221ENST00000622702 SLC17A5Q9NRA2 495 aa17.34■□□□□ 0.37
PDLIM2-221ENST00000622702 MRPS18AQ9NVS2 196 aaKnown RBP17.34■□□□□ 0.37
PDLIM2-221ENST00000622702 UBAP1Q9NZ09 502 aa17.34■□□□□ 0.37
PDLIM2-221ENST00000622702 PCDHGB5Q9Y5G0 923 aa17.34■□□□□ 0.37
PDLIM2-221ENST00000622702 ARPC4-TTLL3A0A0A6YYG9 625 aa17.33■□□□□ 0.37
PDLIM2-221ENST00000622702 SBK2P0C263 348 aa17.33■□□□□ 0.37
PDLIM2-221ENST00000622702 SLC15A1P46059 708 aa17.33■□□□□ 0.37
PDLIM2-221ENST00000622702 ENTPD1P49961 510 aa17.33■□□□□ 0.37
PDLIM2-221ENST00000622702 ADAM8P78325 824 aa17.33■□□□□ 0.37
PDLIM2-221ENST00000622702 TIMM23BQ5SRD1 257 aa17.33■□□□□ 0.37
PDLIM2-221ENST00000622702 OTPQ5XKR4 325 aa17.33■□□□□ 0.37
PDLIM2-221ENST00000622702 SLC16A14Q7RTX9 510 aa17.33■□□□□ 0.37
PDLIM2-221ENST00000622702 SYT9Q86SS6 491 aa17.33■□□□□ 0.37
PDLIM2-221ENST00000622702 ERI1Q8IV48 349 aaKnown RBP17.33■□□□□ 0.37
PDLIM2-221ENST00000622702 LRRC18Q8N456 261 aa17.33■□□□□ 0.37
PDLIM2-221ENST00000622702 WDR31Q8NA23 367 aa17.33■□□□□ 0.37
PDLIM2-221ENST00000622702 S100PBPQ96BU1 408 aa17.33■□□□□ 0.37
PDLIM2-221ENST00000622702 RNFT2Q96EX2 444 aa17.33■□□□□ 0.37
PDLIM2-221ENST00000622702 CNN2Q99439 309 aaKnown RBP17.33■□□□□ 0.37
PDLIM2-221ENST00000622702 ZNF224Q9NZL3 707 aa17.33■□□□□ 0.37
PDLIM2-221ENST00000622702 CYB5R1Q9UHQ9 305 aa17.33■□□□□ 0.37
PDLIM2-221ENST00000622702 PKDREJQ9NTG1 2253 aa17.32■□□□□ 0.36
PDLIM2-221ENST00000622702 C12orf71A8MTZ7 269 aa17.32■□□□□ 0.36
PDLIM2-221ENST00000622702 SELENOFO60613 162 aa17.32■□□□□ 0.36
PDLIM2-221ENST00000622702 HOXC12P31275 282 aa17.32■□□□□ 0.36
PDLIM2-221ENST00000622702 AQP6Q13520 282 aa17.32■□□□□ 0.36
PDLIM2-221ENST00000622702 SLC16A9Q7RTY1 509 aa17.32■□□□□ 0.36
PDLIM2-221ENST00000622702 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.32■□□□□ 0.36
PDLIM2-221ENST00000622702 OR51G2Q8NGK0 314 aa17.32■□□□□ 0.36
PDLIM2-221ENST00000622702 OR6N2Q8NGY6 317 aa17.32■□□□□ 0.36
PDLIM2-221ENST00000622702 NANOS1Q8WY41 292 aaKnown RBP17.32■□□□□ 0.36
PDLIM2-221ENST00000622702 FBXO17Q96EF6 278 aa17.32■□□□□ 0.36
PDLIM2-221ENST00000622702 KCNN2Q9H2S1 579 aa17.32■□□□□ 0.36
PDLIM2-221ENST00000622702 AMDHD2Q9Y303 409 aa17.32■□□□□ 0.36
PDLIM2-221ENST00000622702 LHFPL6Q9Y693 200 aa17.32■□□□□ 0.36
PDLIM2-221ENST00000622702 ANKHD1Q8IWZ3 2542 aaKnown RBP17.32■□□□□ 0.36
PDLIM2-221ENST00000622702 ZNF593O00488 134 aaPredicted RBP17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 TMCC2O75069 709 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 UBL3O95164 117 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 MMP7P09237 267 aaPredicted RBP17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 CCDC159P0C7I6 412 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 PPP3CBP16298 524 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 NAA10P41227 235 aaPredicted RBP17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 UBE2NP61088 152 aaKnown RBP17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 PCBD1P61457 104 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 RAB40BQ12829 278 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 SLC36A2Q495M3 483 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 SHFQ7M4L6 423 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 SSX8Q7RTT4 187 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 BPIFB6Q8NFQ5 453 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 LGALS12Q96DT0 336 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 YIPF3Q9GZM5 350 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 B3GNT2Q9NY97 397 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 ASH2LQ9UBL3 628 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 EXOGQ9Y2C4 368 aaKnown RBP17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 LRCH1Q9Y2L9 728 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 POLR1DQ9Y2S0 133 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 ZNF503-AS2A6NEH8 195 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 SLC1A7O00341 560 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 XPNPEP2O43895 674 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 HLA-HP01893 362 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 MRPL3P09001 348 aaKnown RBP17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 SPARCP09486 303 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 PSKH1P11801 424 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 PAX7P23759 505 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 ATP6V1E1P36543 226 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 PEX19P40855 299 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 KIR2DL3P43628 341 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 KLHL22Q53GT1 634 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 SLC18B1Q6NT16 456 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 DPY19L4Q7Z388 723 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 CDC20BQ86Y33 519 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 ZNF454Q8N9F8 522 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 OTOSQ8NHW6 89 aa17.31■□□□□ 0.36
PDLIM2-221ENST00000622702 FGFBP3Q8TAT2 258 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms