RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 EIF1AXP47813 144 aaKnown RBP12.16□□□□□ -0.46
NEK3-205ENST00000610828 CCR6P51684 374 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 CLRN1P58418 232 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 KLF9Q13886 244 aaPredicted RBP12.16□□□□□ -0.46
NEK3-205ENST00000610828 PCK2Q16822 640 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 TMEM156Q8N614 296 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 DTWD2Q8NBA8 298 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 OR10H5Q8NGA6 315 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 OR52I2Q8NH67 350 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 M1APQ8TC57 530 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 ASB5Q8WWX0 329 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 CACNG6Q9BXT2 260 aa12.16□□□□□ -0.46
NEK3-205ENST00000610828 TMEM269A0A1B0GVZ9 245 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 ZNF814B7Z6K7 855 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 G3V3Y1 287 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 DHFRP00374 187 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 TCRBP04435 133 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 CD2P06729 351 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 TMIGD3P0DMS9 266 aaPredicted RBP12.15□□□□□ -0.46
NEK3-205ENST00000610828 PTHLHP12272 177 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 ACP1P24666 158 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 ADH6P28332 368 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 PTH2RP49190 550 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 SSR4P51571 173 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 P2RY4P51582 365 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 RRAS2P62070 204 aaPredicted RBP12.15□□□□□ -0.46
NEK3-205ENST00000610828 BTG1P62324 171 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 PLA2G7Q13093 441 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 TMEM53Q6P2H8 277 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.15□□□□□ -0.46
NEK3-205ENST00000610828 SLC25A43Q8WUT9 341 aaPredicted RBP12.15□□□□□ -0.46
NEK3-205ENST00000610828 C11orf40Q8WZ69 217 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 JSRP1Q96MG2 331 aaPredicted RBP12.15□□□□□ -0.46
NEK3-205ENST00000610828 GNRHR2Q96P88 292 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 MRPL13Q9BYD1 178 aaKnown RBP12.15□□□□□ -0.46
NEK3-205ENST00000610828 ARRDC1-AS1Q9H2J1 176 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 TP63Q9H3D4 680 aaPredicted RBP12.15□□□□□ -0.46
NEK3-205ENST00000610828 KLHL9Q9P2J3 617 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 A0A1W2PPL8 197 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 GABARAPH6UMI1 98 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 SULT2B1O00204 365 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 SRSF10O75494 262 aaKnown RBP12.15□□□□□ -0.46
NEK3-205ENST00000610828 IGHG1P01857 330 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 HRGP04196 525 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 ITGA5P08648 1049 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 H2BFMP0C1H6 154 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 SDHBP21912 280 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 MPLP40238 635 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 THEM4Q5T1C6 240 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 DCAF12Q5T6F0 453 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 CARD17Q5XLA6 110 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 SLC22A10Q63ZE4 541 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 ASPHD2Q6ICH7 369 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 RPS19BP1Q86WX3 136 aaKnown RBP12.15□□□□□ -0.46
NEK3-205ENST00000610828 PLPP7Q8NBV4 271 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 OR51D1Q8NGF3 324 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 FCAMRQ8WWV6 532 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 AKAP1Q92667 903 aaKnown RBP eCLIP12.15□□□□□ -0.46
NEK3-205ENST00000610828 ZBTB8AQ96BR9 441 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 SLC25A44Q96H78 314 aaPredicted RBP12.15□□□□□ -0.46
NEK3-205ENST00000610828 NKX3-1Q99801 234 aaPredicted RBP12.15□□□□□ -0.46
NEK3-205ENST00000610828 C7orf50Q9BRJ6 194 aaKnown RBP12.15□□□□□ -0.46
NEK3-205ENST00000610828 AKAP7Q9P0M2 348 aaPredicted RBP12.15□□□□□ -0.46
NEK3-205ENST00000610828 CKLFQ9UBR5 152 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 KLK11Q9UBX7 282 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 OR52A1Q9UKL2 312 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 RCE1Q9Y256 329 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 NUBP2Q9Y5Y2 271 aa12.15□□□□□ -0.46
NEK3-205ENST00000610828 A0A0A6YYJ9 748 aa12.14□□□□□ -0.47
NEK3-205ENST00000610828 A0A1W2PQ72 361 aa12.14□□□□□ -0.47
NEK3-205ENST00000610828 RAMP1O60894 148 aa12.14□□□□□ -0.47
NEK3-205ENST00000610828 KRT33AO76009 404 aa12.14□□□□□ -0.47
NEK3-205ENST00000610828 STK17BO94768 372 aa12.14□□□□□ -0.47
NEK3-205ENST00000610828 ZNF43P17038 809 aa12.14□□□□□ -0.47
NEK3-205ENST00000610828 RPS18P62269 152 aaKnown RBP12.14□□□□□ -0.47
NEK3-205ENST00000610828 IFITM2Q01629 132 aa12.14□□□□□ -0.47
NEK3-205ENST00000610828 DYRK1AQ13627 763 aa12.14□□□□□ -0.47
NEK3-205ENST00000610828 NHLRC1Q6VVB1 395 aa12.14□□□□□ -0.47
NEK3-205ENST00000610828 ADPRHL1Q8NDY3 354 aa12.14□□□□□ -0.47
NEK3-205ENST00000610828 NOXO1Q8NFA2 376 aa12.14□□□□□ -0.47
NEK3-205ENST00000610828 SEC61A2Q9H9S3 476 aa12.14□□□□□ -0.47
NEK3-205ENST00000610828 G6PC2Q9NQR9 355 aa12.14□□□□□ -0.47
NEK3-205ENST00000610828 HPF1Q9NWY4 346 aa12.14□□□□□ -0.47
NEK3-205ENST00000610828 HDGFL3Q9Y3E1 203 aa12.14□□□□□ -0.47
NEK3-205ENST00000610828 SULT1B1O43704 296 aa12.14□□□□□ -0.47
NEK3-205ENST00000610828 TRAF3IP2O43734 574 aaPredicted RBP12.14□□□□□ -0.47
NEK3-205ENST00000610828 PGA4P0DJD7 388 aa12.14□□□□□ -0.47
NEK3-205ENST00000610828 PGA3P0DJD8 388 aa12.14□□□□□ -0.47
NEK3-205ENST00000610828 KLK2P20151 261 aa12.14□□□□□ -0.47
NEK3-205ENST00000610828 LAP3P28838 519 aa12.14□□□□□ -0.47
NEK3-205ENST00000610828 NOXA1Q86UR1 476 aa12.14□□□□□ -0.47
NEK3-205ENST00000610828 OR13C3Q8NGS6 347 aa12.14□□□□□ -0.47
NEK3-205ENST00000610828 RNF133Q8WVZ7 376 aa12.14□□□□□ -0.47
NEK3-205ENST00000610828 ING3Q9NXR8 418 aa12.14□□□□□ -0.47
NEK3-205ENST00000610828 TAS2R4Q9NYW5 299 aa12.14□□□□□ -0.47
NEK3-205ENST00000610828 COPZ2Q9P299 210 aa12.14□□□□□ -0.47
NEK3-205ENST00000610828 KLHL13Q9P2N7 655 aa12.14□□□□□ -0.47
NEK3-205ENST00000610828 CDV3Q9UKY7 258 aaKnown RBP12.14□□□□□ -0.47
NEK3-205ENST00000610828 HHLA2Q9UM44 414 aa12.14□□□□□ -0.47
NEK3-205ENST00000610828 LOC107986453A0A1B0GWG9 222 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms