RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 LINC00299Q6ZSB3 139 aa15.63■□□□□ 0.09
SHKBP1-224ENST00000600718 OR52N5Q8NH56 324 aa15.63■□□□□ 0.09
SHKBP1-224ENST00000600718 RPS4Y2Q8TD47 263 aa15.63■□□□□ 0.09
SHKBP1-224ENST00000600718 GHSRQ92847 366 aa15.63■□□□□ 0.09
SHKBP1-224ENST00000600718 PGLYRP3Q96LB9 341 aa15.63■□□□□ 0.09
SHKBP1-224ENST00000600718 KCTD7Q96MP8 289 aa15.63■□□□□ 0.09
SHKBP1-224ENST00000600718 SLX1AQ9BQ83 275 aa15.63■□□□□ 0.09
SHKBP1-224ENST00000600718 MROQ9BYG7 248 aa15.63■□□□□ 0.09
SHKBP1-224ENST00000600718 ULBP2Q9BZM5 246 aa15.63■□□□□ 0.09
SHKBP1-224ENST00000600718 CAMK2AQ9UQM7 478 aa15.63■□□□□ 0.09
SHKBP1-224ENST00000600718 UGT2A1Q9Y4X1 527 aa15.63■□□□□ 0.09
SHKBP1-224ENST00000600718 KIAA1549Q9HCM3 1950 aa15.63■□□□□ 0.09
SHKBP1-224ENST00000600718 GABRPO00591 440 aa15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 NTF4P34130 210 aa15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 GDI2P50395 445 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 UCNP55089 124 aa15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 ZNF846Q147U1 533 aa15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 RNPS1Q15287 305 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 C3AR1Q16581 482 aa15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 TRIM16LQ309B1 348 aa15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 RPUSD3Q6P087 351 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 FOXL2NBQ6ZUU3 175 aa15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 KRT77Q7Z794 578 aa15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 RBMXL3Q8N7X1 1067 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 ELOVL3Q9HB03 270 aa15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 B3GAT2Q9NPZ5 323 aa15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 POLE4Q9NR33 117 aa15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 PARPBPQ9NWS1 579 aa15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 CYB5R1Q9UHQ9 305 aa15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 ALPK2Q86TB3 2170 aa15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 ZNF724A8MTY0 619 aa15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 AQP7O14520 342 aa15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 GPRIN2O60269 458 aa15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 ZNF254O75437 659 aa15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 RPP14O95059 124 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 CDAP32320 146 aa15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 ZNF84P51523 738 aa15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 TBR1Q16650 682 aa15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 DEGS2Q6QHC5 323 aa15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 TMEM91Q6ZNR0 172 aa15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 DCXRQ7Z4W1 244 aa15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 ABHD4Q8TB40 342 aa15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 FNDC9Q8TBE3 224 aa15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 ST7LQ8TDW4 575 aa15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 RNF166Q96A37 237 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 KCNN2Q9H2S1 579 aa15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 BCO1Q9HAY6 547 aa15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 NOSIPQ9Y314 301 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-224ENST00000600718 SERPINA3P01011 423 aa15.61■□□□□ 0.09
SHKBP1-224ENST00000600718 ID4P47928 161 aa15.61■□□□□ 0.09
SHKBP1-224ENST00000600718 TMPRSS3P57727 454 aa15.61■□□□□ 0.09
SHKBP1-224ENST00000600718 LSM6P62312 80 aaKnown RBP15.61■□□□□ 0.09
SHKBP1-224ENST00000600718 TMEM53Q6P2H8 277 aa15.61■□□□□ 0.09
SHKBP1-224ENST00000600718 FDX2Q6P4F2 183 aa15.61■□□□□ 0.09
SHKBP1-224ENST00000600718 LRRN1Q6UXK5 716 aa15.61■□□□□ 0.09
SHKBP1-224ENST00000600718 LINC00346Q8IVM7 164 aa15.61■□□□□ 0.09
SHKBP1-224ENST00000600718 SIAH3Q8IW03 269 aa15.61■□□□□ 0.09
SHKBP1-224ENST00000600718 GPR137CQ8N3F9 429 aa15.61■□□□□ 0.09
SHKBP1-224ENST00000600718 RBM24Q9BX46 236 aaKnown RBP15.61■□□□□ 0.09
SHKBP1-224ENST00000600718 WDR12Q9GZL7 423 aaKnown RBP15.61■□□□□ 0.09
SHKBP1-224ENST00000600718 PRDM14Q9GZV8 571 aa15.61■□□□□ 0.09
SHKBP1-224ENST00000600718 C1orf198Q9H425 327 aa15.61■□□□□ 0.09
SHKBP1-224ENST00000600718 PLSCR2Q9NRY7 297 aa15.61■□□□□ 0.09
SHKBP1-224ENST00000600718 CCDC59Q9P031 241 aaKnown RBP15.61■□□□□ 0.09
SHKBP1-224ENST00000600718 ZNF175Q9Y473 711 aa15.61■□□□□ 0.09
SHKBP1-224ENST00000600718 CLDN25C9JDP6 229 aa15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 MRPL33O75394 65 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 ADRB1P08588 477 aa15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 RIDAP52758 137 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 ALKBH1Q13686 389 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 INAQ16352 499 aa15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 SGCAQ16586 387 aa15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 RIPPLY2Q5TAB7 128 aa15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 MCEMP1Q8IX19 187 aa15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 OR2AJ1Q8NGZ0 328 aa15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 DACH2Q96NX9 599 aa15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 TAAR6Q96RI8 345 aa15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 MED18Q9BUE0 208 aa15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 EMC7Q9NPA0 242 aa15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 POLR1DQ9Y2S0 133 aa15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 CD8B2A6NJW9 211 aa15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 K7EM74 188 aa15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 IL1AP01583 271 aa15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 YES1P07947 543 aa15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 CD8BP10966 210 aa15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 MSR1P21757 451 aa15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 SOX6P35712 828 aa15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 EIF2B2P49770 351 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 NANOS3P60323 173 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 CPT1CQ8TCG5 803 aa15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 RNF133Q8WVZ7 376 aa15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 SARAFQ96BY9 339 aa15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 ABHD17AQ96GS6 310 aa15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 DCLRE1CQ96SD1 692 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 SLIRPQ9GZT3 109 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 NELFAQ9H3P2 528 aa15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 HMG20AQ9NP66 347 aa15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 DAPK2Q9UIK4 370 aa15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 LHFPL6Q9Y693 200 aa15.6■□□□□ 0.09
SHKBP1-224ENST00000600718 RPS19P39019 145 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms