RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 RDH10Q8IZV5 341 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 CADM3Q8N126 398 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 PRSS35Q8N3Z0 413 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 SUMF1Q8NBK3 374 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 DUSP18Q8NEJ0 188 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 ENKURQ8TC29 256 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 RGP1Q92546 391 aaPredicted RBP9.27□□□□□ -0.93
VPS25-203ENST00000589520 RFT1Q96AA3 541 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 FOXRED1Q96CU9 486 aaPredicted RBP9.27□□□□□ -0.93
VPS25-203ENST00000589520 DNAJA3Q96EY1 480 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 S100A16Q96FQ6 103 aaKnown RBP9.27□□□□□ -0.93
VPS25-203ENST00000589520 GNRHR2Q96P88 292 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 NEURL2Q9BR09 285 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 WACQ9BTA9 647 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 OR2B2Q9GZK3 357 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 ABCG5Q9H222 651 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 BRD7Q9NPI1 651 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 RBFOX1Q9NWB1 397 aaKnown RBP9.27□□□□□ -0.93
VPS25-203ENST00000589520 MED29Q9NX70 200 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 CYB5R1Q9UHQ9 305 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 HHLA2Q9UM44 414 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 BOKQ9UMX3 212 aaPredicted RBP9.27□□□□□ -0.93
VPS25-203ENST00000589520 DHDHQ9UQ10 334 aa9.27□□□□□ -0.93
VPS25-203ENST00000589520 A0A1W2PNR3 127 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 A0A1W2PPK0 400 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 ACOD1A6NK06 481 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 ANXA2P2A6NMY6 339 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 CENPXA8MT69 81 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 SHISA8B8ZZ34 492 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.26□□□□□ -0.93
VPS25-203ENST00000589520 NPIPA2E9PIF3 369 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 NPIPA3F8WFD2 350 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 GSTZ1O43708 216 aaPredicted RBP9.26□□□□□ -0.93
VPS25-203ENST00000589520 ANXA2P07355 339 aaKnown RBP9.26□□□□□ -0.93
VPS25-203ENST00000589520 H2BFMP0C1H6 154 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 UBCP0CG48 685 aaKnown RBP9.26□□□□□ -0.93
VPS25-203ENST00000589520 CD37P11049 281 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 FSTP19883 344 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 AZGP1P25311 298 aaKnown RBP9.26□□□□□ -0.93
VPS25-203ENST00000589520 SFTPDP35247 375 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 MAP2K3P46734 347 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 CD97P48960 835 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 MMP15P51511 669 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 SUCLG1P53597 346 aaKnown RBP9.26□□□□□ -0.93
VPS25-203ENST00000589520 Q0VFX4 171 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 TOMM20Q15388 145 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 TAB1Q15750 504 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 C10orf128Q5T292 105 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 HES3Q5TGS1 186 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 GLT8D1Q68CQ7 371 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 DCXRQ7Z4W1 244 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 NRARPQ7Z6K4 114 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 PIP4P1Q86T03 277 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 LRRTM1Q86UE6 522 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 GPAT4Q86UL3 456 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 CCDC54Q8NEL0 328 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 IL17RDQ8NFM7 739 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 ST7LQ8TDW4 575 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 SNRNP27Q8WVK2 155 aaKnown RBP9.26□□□□□ -0.93
VPS25-203ENST00000589520 TSEN15Q8WW01 171 aaKnown RBP9.26□□□□□ -0.93
VPS25-203ENST00000589520 DEDD2Q8WXF8 326 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 C11orf40Q8WZ69 217 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 TMEM54Q969K7 222 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 TMEM106AQ96A25 262 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 THOC3Q96J01 351 aaKnown RBP9.26□□□□□ -0.93
VPS25-203ENST00000589520 JSRP1Q96MG2 331 aaPredicted RBP9.26□□□□□ -0.93
VPS25-203ENST00000589520 FAM173AQ9BQD7 235 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 THAP7Q9BT49 309 aaPredicted RBP9.26□□□□□ -0.93
VPS25-203ENST00000589520 ZFP64Q9NPA5 681 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 SLC17A5Q9NRA2 495 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 ZNF275Q9NSD4 429 aaPredicted RBP9.26□□□□□ -0.93
VPS25-203ENST00000589520 GLTPQ9NZD2 209 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 B4GALT7Q9UBV7 327 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 CDV3Q9UKY7 258 aaKnown RBP9.26□□□□□ -0.93
VPS25-203ENST00000589520 LRP12Q9Y561 859 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 PCDHGA9Q9Y5G4 932 aaKnown RBP9.26□□□□□ -0.93
VPS25-203ENST00000589520 HRH3Q9Y5N1 445 aa9.26□□□□□ -0.93
VPS25-203ENST00000589520 TMEM269A0A1B0GVZ9 245 aa9.25□□□□□ -0.93
VPS25-203ENST00000589520 LYRM1O43325 122 aa9.25□□□□□ -0.93
VPS25-203ENST00000589520 SLC43A1O75387 559 aa9.25□□□□□ -0.93
VPS25-203ENST00000589520 SRSF10O75494 262 aaKnown RBP9.25□□□□□ -0.93
VPS25-203ENST00000589520 TNFSF15O95150 251 aa9.25□□□□□ -0.93
VPS25-203ENST00000589520 GPANK1O95872 356 aa9.25□□□□□ -0.93
VPS25-203ENST00000589520 APOC1P02654 83 aa9.25□□□□□ -0.93
VPS25-203ENST00000589520 EIF4EP06730 217 aaKnown RBP9.25□□□□□ -0.93
VPS25-203ENST00000589520 KIR3DL2P43630 455 aa9.25□□□□□ -0.93
VPS25-203ENST00000589520 CSNK1A1P48729 337 aa9.25□□□□□ -0.93
VPS25-203ENST00000589520 ART1P52961 327 aa9.25□□□□□ -0.93
VPS25-203ENST00000589520 RPS18P62269 152 aaKnown RBP9.25□□□□□ -0.93
VPS25-203ENST00000589520 GABREP78334 506 aa9.25□□□□□ -0.93
VPS25-203ENST00000589520 OC90Q02509 493 aaPredicted RBP9.25□□□□□ -0.93
VPS25-203ENST00000589520 CAMK2DQ13557 499 aa9.25□□□□□ -0.93
VPS25-203ENST00000589520 P2RY14Q15391 338 aa9.25□□□□□ -0.93
VPS25-203ENST00000589520 AGAP6Q5VW22 663 aa9.25□□□□□ -0.93
VPS25-203ENST00000589520 PLET1Q6UQ28 207 aa9.25□□□□□ -0.93
VPS25-203ENST00000589520 DHRS13Q6UX07 377 aa9.25□□□□□ -0.93
VPS25-203ENST00000589520 FOXL2NBQ6ZUU3 175 aa9.25□□□□□ -0.93
VPS25-203ENST00000589520 CREB3L2Q70SY1 520 aa9.25□□□□□ -0.93
VPS25-203ENST00000589520 CDH24Q86UP0 819 aa9.25□□□□□ -0.93
VPS25-203ENST00000589520 TMPRSS12Q86WS5 348 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms