RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 C1orf94Q6P1W5 598 aa11.61□□□□□ -0.55
HDAC5-208ENST00000588419 ERICH5Q6P6B1 374 aa11.61□□□□□ -0.55
HDAC5-208ENST00000588419 USP43Q70EL4 1123 aa11.61□□□□□ -0.55
HDAC5-208ENST00000588419 OR8J3Q8NGG0 315 aa11.61□□□□□ -0.55
HDAC5-208ENST00000588419 OR13C2Q8NGS9 318 aa11.61□□□□□ -0.55
HDAC5-208ENST00000588419 STON2Q8WXE9 905 aa11.61□□□□□ -0.55
HDAC5-208ENST00000588419 BPIFA2Q96DR5 249 aa11.61□□□□□ -0.55
HDAC5-208ENST00000588419 C4orf45Q96LM5 186 aa11.61□□□□□ -0.55
HDAC5-208ENST00000588419 PRRC1Q96M27 445 aa11.61□□□□□ -0.55
HDAC5-208ENST00000588419 DUX5Q96PT3 197 aa11.61□□□□□ -0.55
HDAC5-208ENST00000588419 ALG12Q9BV10 488 aa11.61□□□□□ -0.55
HDAC5-208ENST00000588419 POLR2J2Q9GZM3 115 aaKnown RBP11.61□□□□□ -0.55
HDAC5-208ENST00000588419 POLR2J3Q9H1A7 115 aaKnown RBP11.61□□□□□ -0.55
HDAC5-208ENST00000588419 ELOVL3Q9HB03 270 aa11.61□□□□□ -0.55
HDAC5-208ENST00000588419 EMC7Q9NPA0 242 aa11.61□□□□□ -0.55
HDAC5-208ENST00000588419 ESM1Q9NQ30 184 aa11.61□□□□□ -0.55
HDAC5-208ENST00000588419 CYSLTR2Q9NS75 346 aa11.61□□□□□ -0.55
HDAC5-208ENST00000588419 HIF3AQ9Y2N7 669 aa11.61□□□□□ -0.55
HDAC5-208ENST00000588419 FAM220BPB1ANY3 271 aa11.6□□□□□ -0.55
HDAC5-208ENST00000588419 FXYD1O00168 92 aa11.6□□□□□ -0.55
HDAC5-208ENST00000588419 UBOX5O94941 541 aa11.6□□□□□ -0.55
HDAC5-208ENST00000588419 CST2P09228 141 aa11.6□□□□□ -0.55
HDAC5-208ENST00000588419 GSTM3P21266 225 aa11.6□□□□□ -0.55
HDAC5-208ENST00000588419 MSR1P21757 451 aa11.6□□□□□ -0.55
HDAC5-208ENST00000588419 HTR5AP47898 357 aa11.6□□□□□ -0.55
HDAC5-208ENST00000588419 PCBD1P61457 104 aa11.6□□□□□ -0.55
HDAC5-208ENST00000588419 ST3GAL3Q11203 375 aa11.6□□□□□ -0.55
HDAC5-208ENST00000588419 AWAT1Q58HT5 328 aa11.6□□□□□ -0.55
HDAC5-208ENST00000588419 MTX3Q5HYI7 312 aa11.6□□□□□ -0.55
HDAC5-208ENST00000588419 FAM27BQ5VT28 67 aa11.6□□□□□ -0.55
HDAC5-208ENST00000588419 OTPQ5XKR4 325 aa11.6□□□□□ -0.55
HDAC5-208ENST00000588419 CALHM3Q86XJ0 350 aa11.6□□□□□ -0.55
HDAC5-208ENST00000588419 NRMQ8IXM6 262 aa11.6□□□□□ -0.55
HDAC5-208ENST00000588419 OR2Z1Q8NG97 314 aa11.6□□□□□ -0.55
HDAC5-208ENST00000588419 C10orf82Q8WW14 230 aa11.6□□□□□ -0.55
HDAC5-208ENST00000588419 NMD3Q96D46 503 aaKnown RBP11.6□□□□□ -0.55
HDAC5-208ENST00000588419 SIKE1Q9BRV8 207 aa11.6□□□□□ -0.55
HDAC5-208ENST00000588419 POFUT1Q9H488 388 aa11.6□□□□□ -0.55
HDAC5-208ENST00000588419 RERGLQ9H628 205 aa11.6□□□□□ -0.55
HDAC5-208ENST00000588419 DDX28Q9NUL7 540 aaKnown RBP11.6□□□□□ -0.55
HDAC5-208ENST00000588419 TIMM10BQ9Y5J6 103 aa11.6□□□□□ -0.55
HDAC5-208ENST00000588419 NPTNQ9Y639 398 aa11.6□□□□□ -0.55
HDAC5-208ENST00000588419 EFCAB9A8MZ26 197 aa11.59□□□□□ -0.55
HDAC5-208ENST00000588419 J3KTA2 159 aa11.59□□□□□ -0.55
HDAC5-208ENST00000588419 WIPF1O43516 503 aa11.59□□□□□ -0.55
HDAC5-208ENST00000588419 FOXH1O75593 365 aa11.59□□□□□ -0.55
HDAC5-208ENST00000588419 IGF2P01344 180 aa11.59□□□□□ -0.55
HDAC5-208ENST00000588419 IGHMP01871 453 aa11.59□□□□□ -0.55
HDAC5-208ENST00000588419 THRBP10828 461 aa11.59□□□□□ -0.55
HDAC5-208ENST00000588419 FUT4P22083 530 aa11.59□□□□□ -0.55
HDAC5-208ENST00000588419 TNFSF4P23510 183 aa11.59□□□□□ -0.55
HDAC5-208ENST00000588419 GATA3P23771 443 aa11.59□□□□□ -0.55
HDAC5-208ENST00000588419 FPR2P25090 351 aa11.59□□□□□ -0.55
HDAC5-208ENST00000588419 RPL4P36578 427 aaKnown RBP11.59□□□□□ -0.55
HDAC5-208ENST00000588419 LIPAP38571 399 aa11.59□□□□□ -0.55
HDAC5-208ENST00000588419 GPR4P46093 362 aa11.59□□□□□ -0.55
HDAC5-208ENST00000588419 COMPP49747 757 aaPredicted RBP11.59□□□□□ -0.55
HDAC5-208ENST00000588419 ARFIP2P53365 341 aa11.59□□□□□ -0.55
HDAC5-208ENST00000588419 UBA52P62987 128 aaKnown RBP11.59□□□□□ -0.55
HDAC5-208ENST00000588419 ENDOGQ14249 297 aaKnown RBP11.59□□□□□ -0.55
HDAC5-208ENST00000588419 ARL9Q6T311 187 aa11.59□□□□□ -0.55
HDAC5-208ENST00000588419 RBMS3Q6XE24 437 aaKnown RBP11.59□□□□□ -0.55
HDAC5-208ENST00000588419 OAFQ86UD1 273 aa11.59□□□□□ -0.55
HDAC5-208ENST00000588419 SIGLECL1Q8N7X8 197 aa11.59□□□□□ -0.55
HDAC5-208ENST00000588419 ZDHHC22Q8N966 263 aa11.59□□□□□ -0.55
HDAC5-208ENST00000588419 OR2T12Q8NG77 320 aa11.59□□□□□ -0.55
HDAC5-208ENST00000588419 LIPHQ8WWY8 451 aa11.59□□□□□ -0.55
HDAC5-208ENST00000588419 FNDC11Q9BVV2 318 aa11.59□□□□□ -0.55
HDAC5-208ENST00000588419 C1QTNF5Q9BXJ0 243 aa11.59□□□□□ -0.55
HDAC5-208ENST00000588419 TMEM106BQ9NUM4 274 aa11.59□□□□□ -0.55
HDAC5-208ENST00000588419 CGGBP1Q9UFW8 167 aaPredicted RBP11.59□□□□□ -0.55
HDAC5-208ENST00000588419 EGFL7Q9UHF1 273 aa11.59□□□□□ -0.55
HDAC5-208ENST00000588419 OPN4Q9UHM6 478 aa11.59□□□□□ -0.55
HDAC5-208ENST00000588419 ZDHHC8Q9ULC8 765 aa11.59□□□□□ -0.55
HDAC5-208ENST00000588419 NDRG4Q9ULP0 352 aaKnown RBP11.59□□□□□ -0.55
HDAC5-208ENST00000588419 A4GNTQ9UNA3 340 aa11.59□□□□□ -0.55
HDAC5-208ENST00000588419 PCDHGB1Q9Y5G3 927 aa11.59□□□□□ -0.55
HDAC5-208ENST00000588419 LOC100653049A0A140TA62 436 aa11.58□□□□□ -0.56
HDAC5-208ENST00000588419 A6NIZ1 184 aa11.58□□□□□ -0.56
HDAC5-208ENST00000588419 NPIPB13A6NJU9 1138 aa11.58□□□□□ -0.56
HDAC5-208ENST00000588419 BBIP1A8MTZ0 92 aa11.58□□□□□ -0.56
HDAC5-208ENST00000588419 C12orf71A8MTZ7 269 aa11.58□□□□□ -0.56
HDAC5-208ENST00000588419 NPIPB4C9JG80 1138 aa11.58□□□□□ -0.56
HDAC5-208ENST00000588419 KRT34O76011 436 aa11.58□□□□□ -0.56
HDAC5-208ENST00000588419 ZNF682O95780 498 aa11.58□□□□□ -0.56
HDAC5-208ENST00000588419 IGHV2-70P01814 119 aa11.58□□□□□ -0.56
HDAC5-208ENST00000588419 SCG5P05408 212 aa11.58□□□□□ -0.56
HDAC5-208ENST00000588419 TSPAN19P0C672 248 aa11.58□□□□□ -0.56
HDAC5-208ENST00000588419 TROVE2P10155 538 aaKnown RBP eCLIP11.58□□□□□ -0.56
HDAC5-208ENST00000588419 EGR1P18146 543 aa11.58□□□□□ -0.56
HDAC5-208ENST00000588419 ZFP36P26651 326 aaKnown RBP11.58□□□□□ -0.56
HDAC5-208ENST00000588419 KDELR2P33947 212 aa11.58□□□□□ -0.56
HDAC5-208ENST00000588419 SLC9A3P48764 834 aa11.58□□□□□ -0.56
HDAC5-208ENST00000588419 RAP1BP61224 184 aa11.58□□□□□ -0.56
HDAC5-208ENST00000588419 SEC61A1P61619 476 aaKnown RBP11.58□□□□□ -0.56
HDAC5-208ENST00000588419 RAP1AP62834 184 aa11.58□□□□□ -0.56
HDAC5-208ENST00000588419 PSG7Q13046 419 aa11.58□□□□□ -0.56
HDAC5-208ENST00000588419 KLF10Q13118 480 aa11.58□□□□□ -0.56
HDAC5-208ENST00000588419 MAPRE2Q15555 327 aa11.58□□□□□ -0.56
HDAC5-208ENST00000588419 FAM205BPQ63HN1 556 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms