RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 PPP1R8Q12972 351 aaKnown RBP10.71□□□□□ -0.69
SMAD3-208ENST00000558827 KRR1Q13601 381 aaKnown RBP10.71□□□□□ -0.69
SMAD3-208ENST00000558827 DGCR6Q14129 220 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 TMEM255AQ5JRV8 349 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 SAMD4BQ5PRF9 694 aaKnown RBP10.71□□□□□ -0.69
SMAD3-208ENST00000558827 FAM27BQ5VT28 67 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 C1orf94Q6P1W5 598 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.71□□□□□ -0.692e-8■■□□□ 12.1
SMAD3-208ENST00000558827 PTCHD4Q6ZW05 846 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 RFPL4BQ6ZWI9 263 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 FAM122BQ7Z309 247 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 DPPA2Q7Z7J5 298 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 ABHD4Q8TB40 342 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 SLC25A40Q8TBP6 338 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 SLC7A6Q92536 515 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 POM121L2Q96KW2 1035 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 TSSK2Q96PF2 358 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 CCT8L2Q96SF2 557 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 BEX2Q9BXY8 128 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 OR2J1Q9GZK6 312 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 SYT4Q9H2B2 425 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 MS4A5Q9H3V2 200 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 GORASP2Q9H8Y8 452 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 SMURF2Q9HAU4 748 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 HINT3Q9NQE9 182 aaKnown RBP10.71□□□□□ -0.69
SMAD3-208ENST00000558827 EIF3KQ9UBQ5 218 aaKnown RBP10.71□□□□□ -0.69
SMAD3-208ENST00000558827 MAGEL2Q9UJ55 1249 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 SIGLEC7Q9Y286 467 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 COA3Q9Y2R0 106 aaPredicted RBP10.71□□□□□ -0.69
SMAD3-208ENST00000558827 TIMM10BQ9Y5J6 103 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 PRSS37A4D1T9 235 aa10.7□□□□□ -0.7
SMAD3-208ENST00000558827 DYNC1I1O14576 645 aa10.7□□□□□ -0.7
SMAD3-208ENST00000558827 PPIHO43447 177 aaKnown RBP10.7□□□□□ -0.7
SMAD3-208ENST00000558827 SPRY3O43610 288 aa10.7□□□□□ -0.7
SMAD3-208ENST00000558827 DCTN3O75935 186 aa10.7□□□□□ -0.7
SMAD3-208ENST00000558827 CST2P09228 141 aa10.7□□□□□ -0.7
SMAD3-208ENST00000558827 HSD17B1P14061 328 aa10.7□□□□□ -0.7
SMAD3-208ENST00000558827 ATP6V1B2P21281 511 aa10.7□□□□□ -0.7
SMAD3-208ENST00000558827 IGFBP5P24593 272 aa10.7□□□□□ -0.7
SMAD3-208ENST00000558827 RRM2P31350 389 aa10.7□□□□□ -0.7
SMAD3-208ENST00000558827 CDKN2AP42771 156 aaKnown RBP10.7□□□□□ -0.7
SMAD3-208ENST00000558827 SELENOVP59797 346 aa10.7□□□□□ -0.7
SMAD3-208ENST00000558827 RIN1Q13671 783 aa10.7□□□□□ -0.7
SMAD3-208ENST00000558827 NRN1LQ496H8 165 aa10.7□□□□□ -0.7
SMAD3-208ENST00000558827 AVPI1Q5T686 147 aa10.7□□□□□ -0.7
SMAD3-208ENST00000558827 FAM205BPQ63HN1 556 aa10.7□□□□□ -0.7
SMAD3-208ENST00000558827 TMEM154Q6P9G4 183 aa10.7□□□□□ -0.7
SMAD3-208ENST00000558827 C16orf89Q6UX73 402 aa10.7□□□□□ -0.7
SMAD3-208ENST00000558827 RINLQ6ZS11 566 aa10.7□□□□□ -0.7
SMAD3-208ENST00000558827 ZER1Q7Z7L7 766 aa10.7□□□□□ -0.7
SMAD3-208ENST00000558827 FITM2Q8N6M3 262 aa10.7□□□□□ -0.7
SMAD3-208ENST00000558827 MCUR1Q96AQ8 359 aa10.7□□□□□ -0.7
SMAD3-208ENST00000558827 SAMD8Q96LT4 415 aa10.7□□□□□ -0.7
SMAD3-208ENST00000558827 ERMAPQ96PL5 475 aaPredicted RBP10.7□□□□□ -0.7
SMAD3-208ENST00000558827 FUZQ9BT04 418 aa10.7□□□□□ -0.7
SMAD3-208ENST00000558827 C1orf198Q9H425 327 aa10.7□□□□□ -0.7
SMAD3-208ENST00000558827 POFUT1Q9H488 388 aa10.7□□□□□ -0.7
SMAD3-208ENST00000558827 ANKRD19PQ9H560 264 aa10.7□□□□□ -0.7
SMAD3-208ENST00000558827 LPAR2Q9HBW0 351 aa10.7□□□□□ -0.7
SMAD3-208ENST00000558827 SRA1Q9HD15 236 aaKnown RBP10.7□□□□□ -0.7
SMAD3-208ENST00000558827 MYOZ1Q9NP98 299 aaPredicted RBP10.7□□□□□ -0.7
SMAD3-208ENST00000558827 ZNF275Q9NSD4 429 aaPredicted RBP10.7□□□□□ -0.7
SMAD3-208ENST00000558827 CACNG2Q9Y698 323 aa10.7□□□□□ -0.7
SMAD3-208ENST00000558827 FBN1P35555 2871 aaKnown RBP10.7□□□□□ -0.7
SMAD3-208ENST00000558827 C12orf71A8MTZ7 269 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 C17orf100A8MU93 164 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 OR10H3O60404 316 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 KHDRBS3O75525 346 aaKnown RBP10.69□□□□□ -0.7
SMAD3-208ENST00000558827 SEMG1P04279 462 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 FABP3P05413 133 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 NR2C1P13056 603 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 ZNF250P15622 560 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 GIFP27352 417 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 GCH1P30793 250 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 GPR6P46095 362 aaPredicted RBP10.69□□□□□ -0.7
SMAD3-208ENST00000558827 HTR5AP47898 357 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 PPP1CBP62140 327 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 MVKQ03426 396 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 MEP1BQ16820 701 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 ZNF718Q3SXZ3 478 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 ANKDD1AQ495B1 522 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 SPRNQ5BIV9 151 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 SLC35F1Q5T1Q4 408 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 FAM166AQ6J272 317 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 FOXL2NBQ6ZUU3 175 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 ZDHHC21Q8IVQ6 265 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 ALDH16A1Q8IZ83 802 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 ZNF540Q8NDQ6 660 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 OR4K13Q8NH42 304 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 FANK1Q8TC84 345 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 SNX33Q8WV41 574 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 IPCEF1Q8WWN9 437 aaPredicted RBP10.69□□□□□ -0.7
SMAD3-208ENST00000558827 RDH5Q92781 318 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 NSL1Q96IY1 281 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 DHRS1Q96LJ7 313 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 BCL2L14Q9BZR8 327 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 NUAK2Q9H093 628 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 SHARPINQ9H0F6 387 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 FN3KQ9H479 309 aa10.69□□□□□ -0.7
SMAD3-208ENST00000558827 NRIP3Q9NQ35 241 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms