RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 VHLLQ6RSH7 139 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 AMER3Q8N944 861 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 SYNPRQ8TBG9 265 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 GLYATL2Q8WU03 294 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 TCEAL3Q969E4 200 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 ZG16BQ96DA0 208 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 SLC25A38Q96DW6 304 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 S100A16Q96FQ6 103 aaKnown RBP4.76□□□□□ -1.65
PROM1-220ENST00000540805 POM121Q96HA1 1249 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 TMEM41AQ96HV5 264 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 ZNF75AQ96N20 296 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 OR6C1Q96RD1 312 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 TSNAXQ99598 290 aaKnown RBP4.76□□□□□ -1.65
PROM1-220ENST00000540805 TSPAN10Q9H1Z9 355 aaPredicted RBP4.76□□□□□ -1.65
PROM1-220ENST00000540805 FBRSQ9HAH7 460 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 SIDT1Q9NXL6 827 aaKnown RBP4.76□□□□□ -1.65
PROM1-220ENST00000540805 GNG8Q9UK08 70 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 PQLC2LA1A4F0 135 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 OGG1O15527 345 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 EMC8O43402 210 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 SCRG1O75711 98 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 H2AFB1P0C5Y9 115 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 NQO2P16083 231 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 ABOP16442 354 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 MGMTP16455 207 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 FUT1P19526 365 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 CD96P40200 585 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 MC3RP41968 323 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 NOVA1P51513 510 aaKnown RBP4.76□□□□□ -1.65
PROM1-220ENST00000540805 H2BFSP57053 126 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 RPS15AP62244 130 aaKnown RBP4.76□□□□□ -1.65
PROM1-220ENST00000540805 ACTA2P62736 377 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 ACTG2P63267 376 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 FABP9Q0Z7S8 132 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 HABP2Q14520 560 aaPredicted RBP4.76□□□□□ -1.65
PROM1-220ENST00000540805 RTL10Q7L3V2 364 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 SSX6Q7RTT6 188 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 TMEM185AQ8NFB2 350 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 SEMA6DQ8NFY4 1073 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 C15orf40Q8WUR7 153 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 FOXN4Q96NZ1 517 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 INSM2Q96T92 566 aaPredicted RBP4.76□□□□□ -1.65
PROM1-220ENST00000540805 NAA11Q9BSU3 229 aaPredicted RBP4.76□□□□□ -1.65
PROM1-220ENST00000540805 SLC25A18Q9H1K4 315 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 TLNRD1Q9H1K6 362 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 ARRDC1-AS1Q9H2J1 176 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 EPHX3Q9H6B9 360 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 ZFP57Q9NU63 452 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 RASL12Q9NYN1 266 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 FOXJ3Q9UPW0 622 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 ZNF443Q9Y2A4 671 aaPredicted RBP4.76□□□□□ -1.65
PROM1-220ENST00000540805 FREM2Q5SZK8 3169 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 DOCK9Q9BZ29 2069 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 A0A0A6YYD5 115 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 TRBV2A0A0J9YWF9 115 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 VSTM2BA6NLU5 285 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 IFITM5A6NNB3 132 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 CER1O95813 267 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 S100A6P06703 90 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 RAB40ALP0C0E4 278 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 COX5BP10606 129 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 DAOP14920 347 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 ST6GAL1P15907 406 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 DPP4P27487 766 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 TEAD1P28347 426 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 PTH2RP49190 550 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 RIDAP52758 137 aaKnown RBP4.76□□□□□ -1.65
PROM1-220ENST00000540805 CLRN1P58418 232 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 FXYD6P3P58550 94 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 UBE2NP61088 152 aaKnown RBP4.76□□□□□ -1.65
PROM1-220ENST00000540805 FOXC1Q12948 553 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 ATXN7L3Q14CW9 347 aaPredicted RBP4.76□□□□□ -1.65
PROM1-220ENST00000540805 TSC22D1Q15714 1073 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 MPPED2Q15777 294 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 ANKRD39Q53RE8 183 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 SPIN3Q5JUX0 258 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 DCAF12L2Q5VW00 463 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 FCRLBQ6BAA4 426 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 DNM1P34Q6PK57 102 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 DPPA4Q7L190 304 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 LRRTM1Q86UE6 522 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 NAA40Q86UY6 237 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 ACOT4Q8N9L9 421 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 ZSCAN4Q8NAM6 433 aaPredicted RBP4.76□□□□□ -1.65
PROM1-220ENST00000540805 OR9A2Q8NGT5 310 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 OR2I1PQ8NGU4 316 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 PFN4Q8NHR9 129 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 SLC2A12Q8TD20 617 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 NPRL2Q8WTW4 380 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 RAB40AQ8WXH6 277 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 ISOC2Q96AB3 205 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 OR5B2Q96R09 309 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 ZDHHC5Q9C0B5 715 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 NRSN2Q9GZP1 204 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 FGF22Q9HCT0 170 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 NOX4Q9NPH5 578 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 MYEF2Q9P2K5 600 aaKnown RBP4.76□□□□□ -1.65
PROM1-220ENST00000540805 ZNF230Q9UIE0 474 aaPredicted RBP4.76□□□□□ -1.65
PROM1-220ENST00000540805 SLC35A3Q9Y2D2 325 aa4.76□□□□□ -1.65
PROM1-220ENST00000540805 YBX2Q9Y2T7 364 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms