RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 PRO1933Q9H354 126 aa7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 ZCCHC4Q9H5U6 513 aa7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 CA10Q9NS85 328 aa7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 MBD2Q9UBB5 411 aa7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 ENPP4Q9Y6X5 453 aa7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 EPG5Q9HCE0 2579 aa7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 ADAMTS20P59510 1910 aa7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 ELOA3DA6NLF2 546 aaPredicted RBP7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 C1orf196B1AJZ1 125 aa7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 M0R036 132 aa7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 TP53I11O14683 189 aa7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 ZNF264O43296 627 aa7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 IL1AP01583 271 aa7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 HLA-DPB1P04440 258 aa7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 GYPBP06028 91 aa7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 NMBP08949 121 aa7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 EVX1P49640 407 aa7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 PCBP3P57721 371 aaKnown RBP7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 BTG1P62324 171 aa7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 SRYQ05066 204 aa7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 BIKQ13323 160 aa7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 CAMK2DQ13557 499 aa7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 OR1Q1Q15612 314 aa7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 ELOA3BQ3SY89 546 aa7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 EIPR1Q53HC9 387 aa7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 GSG1LQ6UXU4 331 aa7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 STX12Q86Y82 276 aa7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 ELOA3Q8NG57 546 aa7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 SFT2D1Q8WV19 159 aa7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 FAM46AQ96IP4 442 aaKnown RBP7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 CCNL2Q96S94 520 aaPredicted RBP7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 SLC25A18Q9H1K4 315 aa7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 ABI3Q9P2A4 366 aa7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 SCP2D1Q9UJQ7 156 aa7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 CHST2Q9Y4C5 530 aa7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 CSAG2Q9Y5P2 127 aa7.83□□□□□ -1.16
LIMCH1-209ENST00000509277 A0A1B0GW55 424 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 OR2AT4A6NND4 320 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 SULT1C2O00338 296 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 RRP8O43159 456 aaKnown RBP7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 FADS1O60427 444 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 SLC25A12O75746 678 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 AK1P00568 194 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 DUX4L2P0CJ85 424 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 DUX4L3P0CJ86 424 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 DUX4L4P0CJ87 422 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 DUX4L5P0CJ88 424 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 DUX4L6P0CJ89 424 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 DUX4L7P0CJ90 424 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 ZNF3P17036 446 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 CXCL2P19875 107 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 AHCYP23526 432 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 NOS3P29474 1203 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 AQP2P41181 271 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 CYB561P49447 251 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 SKP2Q13309 424 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 RIN1Q13671 783 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 EXOSC6Q5RKV6 272 aaKnown RBP7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 NCMAPQ5T1S8 102 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 H3F3CQ6NXT2 135 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 OPN5Q6U736 354 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 LRRC69Q6ZNQ3 347 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 GALNTL5Q7Z4T8 443 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 YRDCQ86U90 279 aaKnown RBP7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 NRMQ8IXM6 262 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 OR52I1Q8NGK6 324 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 OR10R2Q8NGX6 335 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 ISOC2Q96AB3 205 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 ZNF775Q96BV0 537 aaPredicted RBP7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 SPACA9Q96E40 222 aaPredicted RBP7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 SLC41A3Q96GZ6 507 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 GPR137Q96N19 417 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 LMF2Q9BU23 707 aaKnown RBP7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 DNTTIP1Q9H147 329 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 LDAHQ9H6V9 325 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 GHRLQ9UBU3 117 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 DUX4Q9UBX2 424 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 SHISA3A0PJX4 238 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 CCSO14618 274 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 ADAM11O75078 769 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 LGI1O95970 557 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 IGHEP01854 428 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 CRYBA1P05813 215 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 CXADRP78310 365 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 CLN3Q13286 438 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 GK2Q14410 553 aaPredicted RBP7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 OR7A5Q15622 319 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 ACSM5Q6NUN0 579 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 LRP11Q86VZ4 500 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 CYB561A3Q8NBI2 242 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 ZNF248Q8NDW4 579 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 SEMA6DQ8NFY4 1073 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 NSMAFQ92636 917 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 EXTL1Q92935 676 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 IMMP1LQ96LU5 166 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 UTP23Q9BRU9 249 aaKnown RBP7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 OR11A1Q9GZK7 315 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 NXF2Q9GZY0 626 aaKnown RBP7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 SLITRK2Q9H156 845 aa7.82□□□□□ -1.16
LIMCH1-209ENST00000509277 HRH4Q9H3N8 390 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms