RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 PKP2Q99959 881 aa13□□□□□ -0.33
RNF4-210ENST00000508235 RBM4BQ9BQ04 359 aaKnown RBP13□□□□□ -0.33
RNF4-210ENST00000508235 RBM4Q9BWF3 364 aaKnown RBP13□□□□□ -0.33
RNF4-210ENST00000508235 OR2H1Q9GZK4 316 aa13□□□□□ -0.33
RNF4-210ENST00000508235 FN3KQ9H479 309 aa13□□□□□ -0.33
RNF4-210ENST00000508235 ZNF442Q9H7R0 627 aa13□□□□□ -0.33
RNF4-210ENST00000508235 SLC25A19Q9HC21 320 aa13□□□□□ -0.33
RNF4-210ENST00000508235 EMC7Q9NPA0 242 aa13□□□□□ -0.33
RNF4-210ENST00000508235 CA10Q9NS85 328 aa13□□□□□ -0.33
RNF4-210ENST00000508235 KCNG2Q9UJ96 466 aa13□□□□□ -0.33
RNF4-210ENST00000508235 OAZ3Q9UMX2 235 aa13□□□□□ -0.33
RNF4-210ENST00000508235 LAMP3Q9UQV4 416 aa13□□□□□ -0.33
RNF4-210ENST00000508235 FBN2P35556 2912 aa13□□□□□ -0.33
RNF4-210ENST00000508235 DCTN6O00399 190 aa12.99□□□□□ -0.33
RNF4-210ENST00000508235 SMPD2O60906 423 aa12.99□□□□□ -0.33
RNF4-210ENST00000508235 SNAP29O95721 258 aa12.99□□□□□ -0.33
RNF4-210ENST00000508235 DANCRP0C864 163 aa12.99□□□□□ -0.33
RNF4-210ENST00000508235 GAAP10253 952 aa12.99□□□□□ -0.33
RNF4-210ENST00000508235 COX5BP10606 129 aa12.99□□□□□ -0.33
RNF4-210ENST00000508235 NR4A1P22736 598 aa12.99□□□□□ -0.33
RNF4-210ENST00000508235 STOMP27105 288 aa12.99□□□□□ -0.33
RNF4-210ENST00000508235 RPS23P62266 143 aaKnown RBP12.99□□□□□ -0.33
RNF4-210ENST00000508235 DAG1Q14118 895 aa12.99□□□□□ -0.33
RNF4-210ENST00000508235 CRMP1Q14194 572 aa12.99□□□□□ -0.33
RNF4-210ENST00000508235 KDM4DQ6B0I6 523 aa12.99□□□□□ -0.33
RNF4-210ENST00000508235 B3GLCTQ6Y288 498 aa12.99□□□□□ -0.33
RNF4-210ENST00000508235 DTX2Q86UW9 622 aa12.99□□□□□ -0.33
RNF4-210ENST00000508235 MUC15Q8N387 334 aa12.99□□□□□ -0.33
RNF4-210ENST00000508235 IQCF1Q8N6M8 205 aa12.99□□□□□ -0.33
RNF4-210ENST00000508235 SLC26A10Q8NG04 563 aa12.99□□□□□ -0.33
RNF4-210ENST00000508235 C11orf40Q8WZ69 217 aa12.99□□□□□ -0.33
RNF4-210ENST00000508235 FOXN4Q96NZ1 517 aa12.99□□□□□ -0.33
RNF4-210ENST00000508235 CDADC1Q9BWV3 514 aa12.99□□□□□ -0.33
RNF4-210ENST00000508235 CBLN4Q9NTU7 201 aa12.99□□□□□ -0.33
RNF4-210ENST00000508235 FBXO9Q9UK97 447 aaPredicted RBP12.99□□□□□ -0.33
RNF4-210ENST00000508235 ITGB1BP2Q9UKP3 347 aa12.99□□□□□ -0.33
RNF4-210ENST00000508235 NDRG4Q9ULP0 352 aaKnown RBP12.99□□□□□ -0.33
RNF4-210ENST00000508235 APCP25054 2843 aa12.99□□□□□ -0.33
RNF4-210ENST00000508235 CENPEQ02224 2701 aa12.99□□□□□ -0.33
RNF4-210ENST00000508235 SAC3D1A6NKF1 404 aa12.98□□□□□ -0.33
RNF4-210ENST00000508235 SGCEO43556 437 aa12.98□□□□□ -0.33
RNF4-210ENST00000508235 MPZL1O95297 269 aa12.98□□□□□ -0.33
RNF4-210ENST00000508235 SCG5P05408 212 aa12.98□□□□□ -0.33
RNF4-210ENST00000508235 SOD3P08294 240 aa12.98□□□□□ -0.33
RNF4-210ENST00000508235 ZNF823P16415 610 aa12.98□□□□□ -0.33
RNF4-210ENST00000508235 IGFBP5P24593 272 aa12.98□□□□□ -0.33
RNF4-210ENST00000508235 GDI2P50395 445 aaKnown RBP12.98□□□□□ -0.33
RNF4-210ENST00000508235 TEKQ02763 1124 aa12.98□□□□□ -0.33
RNF4-210ENST00000508235 HGFACQ04756 655 aa12.98□□□□□ -0.33
RNF4-210ENST00000508235 SNTB2Q13425 540 aaKnown RBP12.98□□□□□ -0.33
RNF4-210ENST00000508235 ACSM5Q6NUN0 579 aa12.98□□□□□ -0.33
RNF4-210ENST00000508235 ARL9Q6T311 187 aa12.98□□□□□ -0.33
RNF4-210ENST00000508235 LRRC75A-AS1Q8N1F1 130 aa12.98□□□□□ -0.33
RNF4-210ENST00000508235 CPEB3Q8NE35 698 aaKnown RBP12.98□□□□□ -0.33
RNF4-210ENST00000508235 GJC3Q8NFK1 279 aa12.98□□□□□ -0.33
RNF4-210ENST00000508235 OR2AJ1Q8NGZ0 328 aa12.98□□□□□ -0.33
RNF4-210ENST00000508235 AKR7LQ8NHP1 331 aa12.98□□□□□ -0.33
RNF4-210ENST00000508235 TRMT61AQ96FX7 289 aaKnown RBP12.98□□□□□ -0.33
RNF4-210ENST00000508235 TRAF4Q9BUZ4 470 aaPredicted RBP12.98□□□□□ -0.33
RNF4-210ENST00000508235 NMNAT2Q9BZQ4 307 aa12.98□□□□□ -0.33
RNF4-210ENST00000508235 PLEK2Q9NYT0 353 aa12.98□□□□□ -0.33
RNF4-210ENST00000508235 ASH2LQ9UBL3 628 aa12.98□□□□□ -0.33
RNF4-210ENST00000508235 EIF3KQ9UBQ5 218 aaKnown RBP12.98□□□□□ -0.33
RNF4-210ENST00000508235 ORC6Q9Y5N6 252 aa12.98□□□□□ -0.33
RNF4-210ENST00000508235 ABCA12Q86UK0 2595 aa12.97□□□□□ -0.33
RNF4-210ENST00000508235 FAM171A2A8MVW0 826 aa12.97□□□□□ -0.33
RNF4-210ENST00000508235 PRR23D1E9PI22 279 aaPredicted RBP12.97□□□□□ -0.33
RNF4-210ENST00000508235 SURF4O15260 269 aa12.97□□□□□ -0.33
RNF4-210ENST00000508235 DOK2O60496 412 aa12.97□□□□□ -0.33
RNF4-210ENST00000508235 PRR23D2P0DMB1 279 aaPredicted RBP12.97□□□□□ -0.33
RNF4-210ENST00000508235 PAX1P15863 534 aa12.97□□□□□ -0.33
RNF4-210ENST00000508235 APEX1P27695 318 aaKnown RBP12.97□□□□□ -0.33
RNF4-210ENST00000508235 PCSK6P29122 969 aa12.97□□□□□ -0.33
RNF4-210ENST00000508235 FMO3P31513 532 aa12.97□□□□□ -0.33
RNF4-210ENST00000508235 GLRXP35754 106 aa12.97□□□□□ -0.33
RNF4-210ENST00000508235 SERPINF1P36955 418 aa12.97□□□□□ -0.33
RNF4-210ENST00000508235 RAD52P43351 418 aa12.97□□□□□ -0.33
RNF4-210ENST00000508235 ART1P52961 327 aa12.97□□□□□ -0.33
RNF4-210ENST00000508235 NKX6-1P78426 367 aaPredicted RBP12.97□□□□□ -0.33
RNF4-210ENST00000508235 PPP2R2BQ00005 443 aa12.97□□□□□ -0.33
RNF4-210ENST00000508235 PTGES3Q15185 160 aaKnown RBP12.97□□□□□ -0.33
RNF4-210ENST00000508235 KRT80Q6KB66 452 aa12.97□□□□□ -0.33
RNF4-210ENST00000508235 VHLLQ6RSH7 139 aa12.97□□□□□ -0.33
RNF4-210ENST00000508235 UGT2A3Q6UWM9 527 aa12.97□□□□□ -0.33
RNF4-210ENST00000508235 C1orf174Q8IYL3 243 aa12.97□□□□□ -0.33
RNF4-210ENST00000508235 OR9Q1Q8NGQ5 310 aa12.97□□□□□ -0.33
RNF4-210ENST00000508235 IGFBPL1Q8WX77 278 aa12.97□□□□□ -0.33
RNF4-210ENST00000508235 OTULINQ96BN8 352 aa12.97□□□□□ -0.33
RNF4-210ENST00000508235 POM121L2Q96KW2 1035 aa12.97□□□□□ -0.33
RNF4-210ENST00000508235 C9orf16Q9BUW7 83 aa12.97□□□□□ -0.33
RNF4-210ENST00000508235 BCL2L14Q9BZR8 327 aa12.97□□□□□ -0.33
RNF4-210ENST00000508235 WNT5BQ9H1J7 359 aa12.97□□□□□ -0.33
RNF4-210ENST00000508235 ATPIF1Q9UII2 106 aa12.97□□□□□ -0.33
RNF4-210ENST00000508235 ITPR2Q14571 2701 aa12.97□□□□□ -0.33
RNF4-210ENST00000508235 ANKRD17O75179 2603 aaKnown RBP12.96□□□□□ -0.33
RNF4-210ENST00000508235 C5orf49A4QMS7 147 aa12.96□□□□□ -0.33
RNF4-210ENST00000508235 MITFO75030 526 aaPredicted RBP12.96□□□□□ -0.33
RNF4-210ENST00000508235 TFP02787 698 aa12.96□□□□□ -0.33
RNF4-210ENST00000508235 SPI1P17947 270 aa12.96□□□□□ -0.33
RNF4-210ENST00000508235 CCNOP22674 350 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms