RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	DCTN6	O00399	190 aa		11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	DHH	O43323	396 aa		11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	MPZL2	O60487	215 aa		11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	KHDRBS3	O75525	346 aa	Known RBP	11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	CNOT4	O95628	575 aa	Known RBP	11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	SPI1	P17947	270 aa		11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	MYF6	P23409	242 aa		11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	PYCR1	P32322	319 aa		11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	ZNF84	P51523	738 aa		11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	SLC25A1	P53007	311 aa		11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	RPS7	P62081	194 aa	Known RBP	11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	SNRPG	P62308	76 aa	Known RBP	11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	MAD2L1BP	Q15013	274 aa	Predicted RBP	11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	ETFDH	Q16134	617 aa		11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	CEACAM16	Q2WEN9	425 aa		11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	SLC25A47	Q6Q0C1	308 aa		11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	THAP5	Q7Z6K1	395 aa		11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	OR6V1	Q8N148	313 aa		11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	LRRC75A-AS1	Q8N1F1	130 aa		11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	PROKR2	Q8NFJ6	384 aa		11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	OR51L1	Q8NGJ5	315 aa		11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	OR2T4	Q8NH00	348 aa		11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	RHOXF1	Q8NHV9	184 aa		11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	HSD17B8	Q92506	261 aa		11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	PTP4A1	Q93096	173 aa		11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	KISS1R	Q969F8	398 aa	Predicted RBP	11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	ZNF837	Q96EG3	531 aa	Predicted RBP	11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	ANKRD60	Q9BZ19	345 aa		11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	NMNAT2	Q9BZQ4	307 aa		11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	CLN6	Q9NWW5	311 aa		11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	MALT1	Q9UDY8	824 aa		11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	B9D1	Q9UPM9	204 aa		11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	COA3	Q9Y2R0	106 aa	Predicted RBP	11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	FKBP7	Q9Y680	259 aa		11.43	□□□□□ -0.58
NR1H3-223	ENST00000486991	CSPG4	Q6UVK1	2322 aa		11.42	□□□□□ -0.58
NR1H3-223	ENST00000486991	IGLV1-36	A0A0B4J1U3	117 aa		11.42	□□□□□ -0.58
NR1H3-223	ENST00000486991	TMCC2	O75069	709 aa		11.42	□□□□□ -0.58
NR1H3-223	ENST00000486991	ENTPD6	O75354	484 aa		11.42	□□□□□ -0.58
NR1H3-223	ENST00000486991	SEC14L2	O76054	403 aa		11.42	□□□□□ -0.58
NR1H3-223	ENST00000486991	PLAU	P00749	431 aa		11.42	□□□□□ -0.58
NR1H3-223	ENST00000486991	GABRB1	P18505	474 aa		11.42	□□□□□ -0.58
NR1H3-223	ENST00000486991	COX5A	P20674	150 aa		11.42	□□□□□ -0.58
NR1H3-223	ENST00000486991	FOXG1	P55316	489 aa	Predicted RBP	11.42	□□□□□ -0.58
NR1H3-223	ENST00000486991	ISL1	P61371	349 aa		11.42	□□□□□ -0.58
NR1H3-223	ENST00000486991	APOF	Q13790	326 aa		11.42	□□□□□ -0.58
NR1H3-223	ENST00000486991	TSC22D1	Q15714	1073 aa		11.42	□□□□□ -0.58
NR1H3-223	ENST00000486991	C10orf128	Q5T292	105 aa		11.42	□□□□□ -0.58
NR1H3-223	ENST00000486991	SFRP5	Q5T4F7	317 aa		11.42	□□□□□ -0.58
NR1H3-223	ENST00000486991	AADACL4	Q5VUY2	407 aa		11.42	□□□□□ -0.58
NR1H3-223	ENST00000486991		Q6ZT83	130 aa		11.42	□□□□□ -0.58
NR1H3-223	ENST00000486991	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	11.42	□□□□□ -0.58
NR1H3-223	ENST00000486991	GID4	Q8IVV7	300 aa		11.42	□□□□□ -0.58
NR1H3-223	ENST00000486991	OR6K6	Q8NGW6	343 aa		11.42	□□□□□ -0.58
NR1H3-223	ENST00000486991	CNIH3	Q8TBE1	160 aa		11.42	□□□□□ -0.58
NR1H3-223	ENST00000486991	ZNF582	Q96NG8	517 aa	Predicted RBP	11.42	□□□□□ -0.58
NR1H3-223	ENST00000486991	RACGAP1	Q9H0H5	632 aa		11.42	□□□□□ -0.58
NR1H3-223	ENST00000486991	SEC61A2	Q9H9S3	476 aa		11.42	□□□□□ -0.58
NR1H3-223	ENST00000486991	HSPE1-MOB4	S4R3N1	261 aa		11.42	□□□□□ -0.58
NR1H3-223	ENST00000486991	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	11.41	□□□□□ -0.58
NR1H3-223	ENST00000486991	RPL36A-HNRNPH2	H7BZ11	118 aa		11.41	□□□□□ -0.58
NR1H3-223	ENST00000486991	PRODH	O43272	600 aa		11.41	□□□□□ -0.58
NR1H3-223	ENST00000486991	GPANK1	O95872	356 aa		11.41	□□□□□ -0.58
NR1H3-223	ENST00000486991	HLA-DQA2	P01906	255 aa		11.41	□□□□□ -0.58
NR1H3-223	ENST00000486991	MPG	P29372	298 aa		11.41	□□□□□ -0.58
NR1H3-223	ENST00000486991	CDA	P32320	146 aa		11.41	□□□□□ -0.58
NR1H3-223	ENST00000486991	GUCA1A	P43080	201 aa	Predicted RBP	11.41	□□□□□ -0.58
NR1H3-223	ENST00000486991	PTH2R	P49190	550 aa		11.41	□□□□□ -0.58
NR1H3-223	ENST00000486991	ZNF133	P52736	654 aa	Predicted RBP	11.41	□□□□□ -0.58
NR1H3-223	ENST00000486991	NUDT6	P53370	316 aa		11.41	□□□□□ -0.58
NR1H3-223	ENST00000486991	CDH11	P55287	796 aa		11.41	□□□□□ -0.58
NR1H3-223	ENST00000486991	ARF1	P84077	181 aa	Known RBP	11.41	□□□□□ -0.58
NR1H3-223	ENST00000486991	SGCA	Q16586	387 aa		11.41	□□□□□ -0.58
NR1H3-223	ENST00000486991	OCLN	Q16625	522 aa		11.41	□□□□□ -0.58
NR1H3-223	ENST00000486991	MEDAG	Q5VYS4	303 aa		11.41	□□□□□ -0.58
NR1H3-223	ENST00000486991	NXNL2	Q5VZ03	156 aa		11.41	□□□□□ -0.58
NR1H3-223	ENST00000486991	KRT80	Q6KB66	452 aa		11.41	□□□□□ -0.58
NR1H3-223	ENST00000486991	MEPCE	Q7L2J0	689 aa	Known RBP	11.41	□□□□□ -0.58
NR1H3-223	ENST00000486991	ZBTB46	Q86UZ6	589 aa		11.41	□□□□□ -0.58
NR1H3-223	ENST00000486991	WFDC8	Q8IUA0	241 aa		11.41	□□□□□ -0.58
NR1H3-223	ENST00000486991	APH1B	Q8WW43	257 aa		11.41	□□□□□ -0.58
NR1H3-223	ENST00000486991	ZNRF4	Q8WWF5	429 aa		11.41	□□□□□ -0.58
NR1H3-223	ENST00000486991	IGFBPL1	Q8WX77	278 aa		11.41	□□□□□ -0.58
NR1H3-223	ENST00000486991	HTRA1	Q92743	480 aa		11.41	□□□□□ -0.58
NR1H3-223	ENST00000486991	S100PBP	Q96BU1	408 aa		11.41	□□□□□ -0.58
NR1H3-223	ENST00000486991	MUCL1	Q96DR8	90 aa		11.41	□□□□□ -0.58
NR1H3-223	ENST00000486991		Q96MT0	163 aa		11.41	□□□□□ -0.58
NR1H3-223	ENST00000486991	TMEM204	Q9BSN7	226 aa		11.41	□□□□□ -0.58
NR1H3-223	ENST00000486991	ESRP2	Q9H6T0	727 aa	Known RBP	11.41	□□□□□ -0.58
NR1H3-223	ENST00000486991	MOK	Q9UQ07	419 aa		11.41	□□□□□ -0.58
NR1H3-223	ENST00000486991	UGT2A1	Q9Y4X1	527 aa		11.41	□□□□□ -0.58
NR1H3-223	ENST00000486991	CIB4	A0PJX0	185 aa		11.4	□□□□□ -0.58
NR1H3-223	ENST00000486991	CCDC182	A6NF36	153 aa		11.4	□□□□□ -0.58
NR1H3-223	ENST00000486991	TVP23A	A6NH52	213 aa		11.4	□□□□□ -0.58
NR1H3-223	ENST00000486991	DENR	O43583	198 aa	Known RBP	11.4	□□□□□ -0.58
NR1H3-223	ENST00000486991	WBP4	O75554	376 aa	Known RBP	11.4	□□□□□ -0.58
NR1H3-223	ENST00000486991	LYZL6	O75951	148 aa		11.4	□□□□□ -0.58
NR1H3-223	ENST00000486991	GLCE	O94923	617 aa		11.4	□□□□□ -0.58
NR1H3-223	ENST00000486991	ITGA5	P08648	1049 aa		11.4	□□□□□ -0.58
NR1H3-223	ENST00000486991	SLC2A5	P22732	501 aa		11.4	□□□□□ -0.58
NR1H3-223	ENST00000486991	IGHV1-2	P23083	117 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms