RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 ANKRD16Q6P6B7 361 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 PAPD4Q6PIY7 484 aaKnown RBP11.5□□□□□ -0.57
VPS52-218ENST00000482399 FAM180AQ6UWF9 173 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 TMEM184AQ6ZMB5 413 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 MCATQ8IVS2 390 aaKnown RBP11.5□□□□□ -0.57
VPS52-218ENST00000482399 STOML3Q8TAV4 291 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 ELP5Q8TE02 316 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 MAFIPQ8WZ33 124 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 PHYHIPQ92561 330 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 FOXRED1Q96CU9 486 aaPredicted RBP11.5□□□□□ -0.57
VPS52-218ENST00000482399 DCBLD2Q96PD2 775 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 TGM7Q96PF1 710 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 SERTAD3Q9UJW9 196 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 NPTNQ9Y639 398 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 MTCL1Q9Y4B5 1905 aaKnown RBP11.5□□□□□ -0.57
VPS52-218ENST00000482399 TMEM269A0A1B0GVZ9 245 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 H3BML4 177 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 LYPD3O95274 346 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 LDOC1O95751 146 aaPredicted RBP11.5□□□□□ -0.57
VPS52-218ENST00000482399 ERCC1P07992 297 aaPredicted RBP11.5□□□□□ -0.57
VPS52-218ENST00000482399 RD3LP0DJH9 198 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 OR3A2P47893 321 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 PLAURQ03405 335 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 ZP2Q05996 745 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 PPP1R1AQ13522 171 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 NKAPLQ5M9Q1 402 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 SVBPQ8N300 66 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 CMSS1Q9BQ75 279 aaKnown RBP11.5□□□□□ -0.57
VPS52-218ENST00000482399 CRB3Q9BUF7 120 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 WDR13Q9H1Z4 485 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 TMED7Q9Y3B3 224 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 CSAG2Q9Y5P2 127 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 SZT2Q5T011 3432 aa11.5□□□□□ -0.57
VPS52-218ENST00000482399 A0A0D9SG52 128 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 M0R036 132 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 CYR61O00622 381 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 TO15178 435 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 STK17BO94768 372 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 OR2A4O95047 310 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 WNT11O96014 354 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 CA3P07451 260 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 MGMTP16455 207 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 NME2P22392 152 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 TOMM34Q15785 309 aaPredicted RBP11.49□□□□□ -0.57
VPS52-218ENST00000482399 MOGAT2Q3SYC2 334 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 SLC35D3Q5M8T2 416 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 NPSR1Q6W5P4 371 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 ANKRD9Q96BM1 317 aaPredicted RBP11.49□□□□□ -0.57
VPS52-218ENST00000482399 FGGYQ96C11 551 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 OR2A7Q96R45 310 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 ST6GALNAC5Q9BVH7 336 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 PLA2G2FQ9BZM2 168 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 VDAC3Q9Y277 283 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 COA3Q9Y2R0 106 aaPredicted RBP11.49□□□□□ -0.57
VPS52-218ENST00000482399 A0A087WV62 115 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 HMSDA8MTL9 139 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 ZNF264O43296 627 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 TPPPO94811 219 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 FGF2P09038 288 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 H2BFMP0C1H6 154 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 GNB3P16520 340 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 NTSR1P30989 418 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 HRH1P35367 487 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 PMPCAQ10713 525 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 ACKR1Q16570 336 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 ZNF74Q16587 644 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 CARD17Q5XLA6 110 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 C20orf24Q9BUV8 137 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 EMC6Q9BV81 110 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 CST11Q9H112 138 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 CHMP1AQ9HD42 196 aaPredicted RBP11.49□□□□□ -0.57
VPS52-218ENST00000482399 MKL2Q9ULH7 1088 aa11.49□□□□□ -0.57
VPS52-218ENST00000482399 A0A0J9YY10 115 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 UPK3AO75631 287 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 RAB38P57729 211 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 UBXN2BQ14CS0 331 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 MESTQ5EB52 335 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 KRBOX4Q5JUW0 171 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 ATPAF1Q5TC12 328 aaPredicted RBP11.48□□□□□ -0.57
VPS52-218ENST00000482399 C1orf189Q5VU69 101 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 AWAT2Q6E213 333 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 KLHL24Q6TFL4 600 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 OVCH2Q7RTZ1 564 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 HSD17B13Q7Z5P4 300 aaPredicted RBP11.48□□□□□ -0.57
VPS52-218ENST00000482399 ZNF321PQ8N8H1 164 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 MARCH1Q8TCQ1 289 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 TAAR8Q969N4 342 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 C4orf45Q96LM5 186 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 TOX2Q96NM4 488 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 TSPAN32Q96QS1 320 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 KLHDC3Q9BQ90 382 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 MRI1Q9BV20 369 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 NXF5Q9H1B4 397 aaKnown RBP11.48□□□□□ -0.57
VPS52-218ENST00000482399 BANF2Q9H503 90 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 GAREM1Q9H706 876 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 PILRAQ9UKJ1 303 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 A8MXK9 166 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 LMX1BO60663 402 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 PNPP00491 289 aa11.48□□□□□ -0.57
VPS52-218ENST00000482399 HCKP08631 526 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms