RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 CENPBD1B2RD01 187 aa13.62□□□□□ -0.23
SF3A3-203ENST00000461869 SYNGR4O95473 234 aa13.62□□□□□ -0.23
SF3A3-203ENST00000461869 RAB36O95755 333 aa13.62□□□□□ -0.23
SF3A3-203ENST00000461869 MT-ND2P03891 347 aa13.62□□□□□ -0.23
SF3A3-203ENST00000461869 IFNGR1P15260 489 aa13.62□□□□□ -0.23
SF3A3-203ENST00000461869 SLC2A5P22732 501 aa13.62□□□□□ -0.23
SF3A3-203ENST00000461869 DCKP27707 260 aa13.62□□□□□ -0.23
SF3A3-203ENST00000461869 ATP6V1E1P36543 226 aa13.62□□□□□ -0.23
SF3A3-203ENST00000461869 BLVRAP53004 296 aa13.62□□□□□ -0.23
SF3A3-203ENST00000461869 SLC16A1P53985 500 aa13.62□□□□□ -0.23
SF3A3-203ENST00000461869 TBCEQ15813 527 aaPredicted RBP13.62□□□□□ -0.23
SF3A3-203ENST00000461869 ETFDHQ16134 617 aa13.62□□□□□ -0.23
SF3A3-203ENST00000461869 ABLIM2Q6H8Q1 611 aa13.62□□□□□ -0.23
SF3A3-203ENST00000461869 PHC2Q8IXK0 858 aa13.62□□□□□ -0.23
SF3A3-203ENST00000461869 SPARTQ8N0X7 666 aa13.62□□□□□ -0.23
SF3A3-203ENST00000461869 POMGNT2Q8NAT1 580 aa13.62□□□□□ -0.23
SF3A3-203ENST00000461869 TMEM80Q96HE8 168 aa13.62□□□□□ -0.23
SF3A3-203ENST00000461869 DDOQ99489 341 aa13.62□□□□□ -0.23
SF3A3-203ENST00000461869 SRXN1Q9BYN0 137 aa13.62□□□□□ -0.23
SF3A3-203ENST00000461869 NMNAT2Q9BZQ4 307 aa13.62□□□□□ -0.23
SF3A3-203ENST00000461869 OR10A4Q9H209 315 aa13.62□□□□□ -0.23
SF3A3-203ENST00000461869 OR51V1Q9H2C8 321 aa13.62□□□□□ -0.23
SF3A3-203ENST00000461869 FGF20Q9NP95 211 aaPredicted RBP13.62□□□□□ -0.23
SF3A3-203ENST00000461869 GLRX2Q9NS18 164 aa13.62□□□□□ -0.23
SF3A3-203ENST00000461869 HAO2Q9NYQ3 351 aa13.62□□□□□ -0.23
SF3A3-203ENST00000461869 VSX1Q9NZR4 365 aaPredicted RBP13.62□□□□□ -0.23
SF3A3-203ENST00000461869 ERVK-18Q9QC07 812 aa13.62□□□□□ -0.23
SF3A3-203ENST00000461869 MCTS1Q9ULC4 181 aaKnown RBP13.62□□□□□ -0.23
SF3A3-203ENST00000461869 FKBP7Q9Y680 259 aa13.62□□□□□ -0.23
SF3A3-203ENST00000461869 OR6C68A6NDL8 312 aa13.61□□□□□ -0.23
SF3A3-203ENST00000461869 OVOL3O00110 214 aa13.61□□□□□ -0.23
SF3A3-203ENST00000461869 SMAD9O15198 467 aaKnown RBP13.61□□□□□ -0.23
SF3A3-203ENST00000461869 TRAF3IP2O43734 574 aaPredicted RBP13.61□□□□□ -0.23
SF3A3-203ENST00000461869 CXCL13O43927 109 aa13.61□□□□□ -0.23
SF3A3-203ENST00000461869 HTR1AP08908 422 aa13.61□□□□□ -0.23
SF3A3-203ENST00000461869 SPI1P17947 270 aa13.61□□□□□ -0.23
SF3A3-203ENST00000461869 MYL12AP19105 171 aa13.61□□□□□ -0.23
SF3A3-203ENST00000461869 CRABP1P29762 137 aa13.61□□□□□ -0.23
SF3A3-203ENST00000461869 CDKN2AP42771 156 aaKnown RBP13.61□□□□□ -0.23
SF3A3-203ENST00000461869 MELKQ14680 651 aa13.61□□□□□ -0.23
SF3A3-203ENST00000461869 RNLSQ5VYX0 342 aa13.61□□□□□ -0.23
SF3A3-203ENST00000461869 ADAM5Q6NVV9 412 aa13.61□□□□□ -0.23
SF3A3-203ENST00000461869 KCTD8Q6ZWB6 473 aa13.61□□□□□ -0.23
SF3A3-203ENST00000461869 KDM8Q8N371 416 aa13.61□□□□□ -0.23
SF3A3-203ENST00000461869 BBS1Q8NFJ9 593 aa13.61□□□□□ -0.23
SF3A3-203ENST00000461869 OR9Q1Q8NGQ5 310 aa13.61□□□□□ -0.23
SF3A3-203ENST00000461869 OR6X1Q8NH79 312 aa13.61□□□□□ -0.23
SF3A3-203ENST00000461869 LILRB1Q8NHL6 650 aaPredicted RBP13.61□□□□□ -0.23
SF3A3-203ENST00000461869 PTP4A1Q93096 173 aa13.61□□□□□ -0.23
SF3A3-203ENST00000461869 LGALS12Q96DT0 336 aa13.61□□□□□ -0.23
SF3A3-203ENST00000461869 RHNO1Q9BSD3 238 aa13.61□□□□□ -0.23
SF3A3-203ENST00000461869 ALG12Q9BV10 488 aa13.61□□□□□ -0.23
SF3A3-203ENST00000461869 CDCA4Q9BXL8 241 aa13.61□□□□□ -0.23
SF3A3-203ENST00000461869 C12orf49Q9H741 205 aa13.61□□□□□ -0.23
SF3A3-203ENST00000461869 MED20Q9H944 212 aa13.61□□□□□ -0.23
SF3A3-203ENST00000461869 RPRD1BQ9NQG5 326 aaKnown RBP13.61□□□□□ -0.23
SF3A3-203ENST00000461869 YAE1D1Q9NRH1 226 aa13.61□□□□□ -0.23
SF3A3-203ENST00000461869 CHCHD3Q9NX63 227 aaKnown RBP13.61□□□□□ -0.23
SF3A3-203ENST00000461869 DIMT1Q9UNQ2 313 aaKnown RBP13.61□□□□□ -0.23
SF3A3-203ENST00000461869 EXOSC1Q9Y3B2 195 aaKnown RBP13.61□□□□□ -0.23
SF3A3-203ENST00000461869 RNF115Q9Y4L5 304 aa13.61□□□□□ -0.23
SF3A3-203ENST00000461869 CCDC182A6NF36 153 aa13.6□□□□□ -0.23
SF3A3-203ENST00000461869 ZNF726A6NNF4 738 aa13.6□□□□□ -0.23
SF3A3-203ENST00000461869 CD5LO43866 347 aa13.6□□□□□ -0.23
SF3A3-203ENST00000461869 GLCEO94923 617 aa13.6□□□□□ -0.23
SF3A3-203ENST00000461869 IGHG1P01857 330 aa13.6□□□□□ -0.23
SF3A3-203ENST00000461869 SOD3P08294 240 aa13.6□□□□□ -0.23
SF3A3-203ENST00000461869 HLA-DOBP13765 273 aa13.6□□□□□ -0.23
SF3A3-203ENST00000461869 JUNBP17275 347 aaPredicted RBP13.6□□□□□ -0.23
SF3A3-203ENST00000461869 PSMB1P20618 241 aaKnown RBP13.6□□□□□ -0.23
SF3A3-203ENST00000461869 TTKP33981 857 aa13.6□□□□□ -0.23
SF3A3-203ENST00000461869 BIDP55957 195 aa13.6□□□□□ -0.23
SF3A3-203ENST00000461869 ACTC1P68032 377 aa13.6□□□□□ -0.23
SF3A3-203ENST00000461869 ACTA1P68133 377 aa13.6□□□□□ -0.23
SF3A3-203ENST00000461869 GGTLC2Q14390 218 aa13.6□□□□□ -0.23
SF3A3-203ENST00000461869 SLC17A1Q14916 467 aa13.6□□□□□ -0.23
SF3A3-203ENST00000461869 GTF2IRD2BQ6EKJ0 949 aa13.6□□□□□ -0.23
SF3A3-203ENST00000461869 GTF2IRD2Q86UP8 949 aa13.6□□□□□ -0.23
SF3A3-203ENST00000461869 PROKR2Q8NFJ6 384 aa13.6□□□□□ -0.23
SF3A3-203ENST00000461869 STEAP2Q8NFT2 490 aa13.6□□□□□ -0.23
SF3A3-203ENST00000461869 OR9K2Q8NGE7 335 aa13.6□□□□□ -0.23
SF3A3-203ENST00000461869 OR52I1Q8NGK6 324 aa13.6□□□□□ -0.23
SF3A3-203ENST00000461869 TMEM158Q8WZ71 300 aa13.6□□□□□ -0.23
SF3A3-203ENST00000461869 SGCDQ92629 289 aa13.6□□□□□ -0.23
SF3A3-203ENST00000461869 KISS1RQ969F8 398 aaPredicted RBP13.6□□□□□ -0.23
SF3A3-203ENST00000461869 FBXW5Q969U6 566 aa13.6□□□□□ -0.23
SF3A3-203ENST00000461869 S100PBPQ96BU1 408 aa13.6□□□□□ -0.23
SF3A3-203ENST00000461869 SLC25A44Q96H78 314 aaPredicted RBP13.6□□□□□ -0.23
SF3A3-203ENST00000461869 MYCBPQ99417 103 aaPredicted RBP13.6□□□□□ -0.23
SF3A3-203ENST00000461869 CNN2Q99439 309 aaKnown RBP13.6□□□□□ -0.23
SF3A3-203ENST00000461869 TEAD3Q99594 435 aa13.6□□□□□ -0.23
SF3A3-203ENST00000461869 JAM3Q9BX67 310 aa13.6□□□□□ -0.23
SF3A3-203ENST00000461869 HCAR1Q9BXC0 346 aa13.6□□□□□ -0.23
SF3A3-203ENST00000461869 RACGAP1Q9H0H5 632 aa13.6□□□□□ -0.23
SF3A3-203ENST00000461869 SYT4Q9H2B2 425 aa13.6□□□□□ -0.23
SF3A3-203ENST00000461869 INPP5EQ9NRR6 644 aa13.6□□□□□ -0.23
SF3A3-203ENST00000461869 ERGIC3Q9Y282 383 aa13.6□□□□□ -0.23
SF3A3-203ENST00000461869 EXOGQ9Y2C4 368 aaKnown RBP13.6□□□□□ -0.23
SF3A3-203ENST00000461869 COMMD3-BMI1R4GMX3 469 aa13.6□□□□□ -0.23
SF3A3-203ENST00000461869 TLN2Q9Y4G6 2542 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms