RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	EFNA4	P52798	201 aa		10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	HMGA2	P52926	109 aa		10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	MRPS34	P82930	218 aa	Known RBP	10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	DAG1	Q14118	895 aa		10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	MST1L	Q2TV78	715 aa		10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	OTP	Q5XKR4	325 aa		10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	PTCHD4	Q6ZW05	846 aa		10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	ZNF627	Q7L945	461 aa		10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	DPPA2	Q7Z7J5	298 aa		10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	HIPK1	Q86Z02	1210 aa		10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	SLC30A7	Q8NEW0	376 aa		10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	OR4F15	Q8NGB8	312 aa		10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	OR52E2	Q8NGJ4	325 aa		10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	C10orf105	Q8TEF2	133 aa		10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	OTULIN	Q96BN8	352 aa		10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	NMNAT3	Q96T66	252 aa		10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	NIPSNAP1	Q9BPW8	284 aa		10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	TSSK6	Q9BXA6	273 aa		10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	PLA2G12A	Q9BZM1	189 aa		10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	SIAE	Q9HAT2	523 aa		10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	SRA1	Q9HD15	236 aa	Known RBP	10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	RPRD1B	Q9NQG5	326 aa	Known RBP	10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	B3GNT2	Q9NY97	397 aa		10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	ZNF224	Q9NZL3	707 aa		10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	FBXL3	Q9UKT7	428 aa		10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	COA3	Q9Y2R0	106 aa	Predicted RBP	10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	SPEF1	Q9Y4P9	236 aa		10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	UGT2A1	Q9Y4X1	527 aa		10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	MXRA5	Q9NR99	2828 aa		10.99	□□□□□ -0.65
FDPS-204	ENST00000461507	VSTM5	A8MXK1	200 aa		10.98	□□□□□ -0.65
FDPS-204	ENST00000461507	PTH	P01270	115 aa		10.98	□□□□□ -0.65
FDPS-204	ENST00000461507	IGFBP1	P08833	259 aa	Predicted RBP	10.98	□□□□□ -0.65
FDPS-204	ENST00000461507	ZNF32	P17041	273 aa		10.98	□□□□□ -0.65
FDPS-204	ENST00000461507	CRABP1	P29762	137 aa		10.98	□□□□□ -0.65
FDPS-204	ENST00000461507	CDKN2A	P42771	156 aa	Known RBP	10.98	□□□□□ -0.65
FDPS-204	ENST00000461507	PCBD1	P61457	104 aa		10.98	□□□□□ -0.65
FDPS-204	ENST00000461507	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	10.98	□□□□□ -0.65	5e-13	■■■■□ 23.9
FDPS-204	ENST00000461507	CCNI	Q14094	377 aa		10.98	□□□□□ -0.65
FDPS-204	ENST00000461507	GK3P	Q14409	553 aa		10.98	□□□□□ -0.65
FDPS-204	ENST00000461507	RAB35	Q15286	201 aa		10.98	□□□□□ -0.65
FDPS-204	ENST00000461507	EFNB3	Q15768	340 aa		10.98	□□□□□ -0.65
FDPS-204	ENST00000461507	TBC1D28	Q2M2D7	210 aa		10.98	□□□□□ -0.65
FDPS-204	ENST00000461507	TMEM249	Q2WGJ8	235 aa		10.98	□□□□□ -0.65
FDPS-204	ENST00000461507	SLC36A3	Q495N2	470 aa		10.98	□□□□□ -0.65
FDPS-204	ENST00000461507	C6orf52	Q5T4I8	152 aa		10.98	□□□□□ -0.65
FDPS-204	ENST00000461507	RASSF6	Q6ZTQ3	369 aa		10.98	□□□□□ -0.65
FDPS-204	ENST00000461507	TMEM179B	Q7Z7N9	219 aa		10.98	□□□□□ -0.65
FDPS-204	ENST00000461507	HS3ST5	Q8IZT8	346 aa		10.98	□□□□□ -0.65
FDPS-204	ENST00000461507	ZNF525	Q8N782	197 aa		10.98	□□□□□ -0.65
FDPS-204	ENST00000461507	IL17RD	Q8NFM7	739 aa		10.98	□□□□□ -0.65
FDPS-204	ENST00000461507	AKR7L	Q8NHP1	331 aa		10.98	□□□□□ -0.65
FDPS-204	ENST00000461507	NABP1	Q96AH0	204 aa		10.98	□□□□□ -0.65
FDPS-204	ENST00000461507	NMD3	Q96D46	503 aa	Known RBP	10.98	□□□□□ -0.65
FDPS-204	ENST00000461507	TSSK2	Q96PF2	358 aa		10.98	□□□□□ -0.65
FDPS-204	ENST00000461507	FEV	Q99581	238 aa		10.98	□□□□□ -0.65
FDPS-204	ENST00000461507	DGCR6L	Q9BY27	220 aa		10.98	□□□□□ -0.65
FDPS-204	ENST00000461507	NUAK2	Q9H093	628 aa		10.98	□□□□□ -0.65
FDPS-204	ENST00000461507	CA10	Q9NS85	328 aa		10.98	□□□□□ -0.65
FDPS-204	ENST00000461507	TMEM160	Q9NX00	188 aa		10.98	□□□□□ -0.65
FDPS-204	ENST00000461507	DNAJB9	Q9UBS3	223 aa		10.98	□□□□□ -0.65
FDPS-204	ENST00000461507	MALRD1	Q5VYJ5	2156 aa		10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	C12orf71	A8MTZ7	269 aa		10.97	□□□□□ -0.65
FDPS-204	ENST00000461507		A8MV72	311 aa	Predicted RBP	10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	VWC2L	B2RUY7	222 aa		10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	AHCYL1	O43865	530 aa		10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	GPRIN2	O60269	458 aa		10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	GPANK1	O95872	356 aa		10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	OR4A8	P0C604	315 aa		10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	FAM157B	P0CG42	384 aa		10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	APEH	P13798	732 aa	Known RBP	10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	ZNF14	P17017	642 aa	Predicted RBP	10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	PRKACG	P22612	351 aa		10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	FAS	P25445	335 aa		10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	APEX1	P27695	318 aa	Known RBP	10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	ZNF133	P52736	654 aa	Predicted RBP	10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	SNRPD2	P62316	118 aa	Known RBP	10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	DBP	Q10586	325 aa	Predicted RBP	10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	NRN1L	Q496H8	165 aa		10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	PABPC1L2A	Q5JQF8	200 aa		10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	ZNF770	Q6IQ21	691 aa	Predicted RBP	10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	UGT2A3	Q6UWM9	527 aa		10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	CXXC5	Q7LFL8	322 aa	Known RBP	10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	GLB1L2	Q8IW92	636 aa		10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	IQCF1	Q8N6M8	205 aa		10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	CYB561A3	Q8NBI2	242 aa		10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	NUP37	Q8NFH4	326 aa		10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	PROKR2	Q8NFJ6	384 aa		10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	OR2T33	Q8NG76	320 aa		10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	OR8D4	Q8NGM9	314 aa		10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	OR1J2	Q8NGS2	313 aa		10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	FAM168A	Q92567	244 aa		10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	SLCO4A1	Q96BD0	722 aa		10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	ZNF416	Q9BWM5	594 aa		10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	DYNLRB1	Q9NP97	96 aa		10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	POLE4	Q9NR33	117 aa		10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	VSX1	Q9NZR4	365 aa	Predicted RBP	10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	AP4S1	Q9Y587	144 aa		10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	PMF1-BGLAP	U3KQ54	211 aa		10.97	□□□□□ -0.65
FDPS-204	ENST00000461507	FBN3	Q75N90	2809 aa		10.96	□□□□□ -0.65
FDPS-204	ENST00000461507	RIIAD1	A6NNX1	92 aa		10.96	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms