RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 P2RY4P51582 365 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 BMXP51813 675 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 UCP2P55851 309 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 DLX1P56177 255 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 PRB3Q04118 309 aaPredicted RBP4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 GLO1Q04760 184 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 QPRTQ15274 297 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 PDK4Q16654 411 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 GSG1Q2KHT4 349 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 CDONQ4KMG0 1287 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 FBXO48Q5FWF7 155 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 VMO1Q7Z5L0 202 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 CENPVQ7Z7K6 275 aaPredicted RBP4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 RNF130Q86XS8 419 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 EPHX4Q8IUS5 362 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 FAM71E2Q8N5Q1 922 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 TMCO5AQ8N6Q1 288 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 ZNF645Q8N7E2 425 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 Q8N7P7 452 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 OR8B3Q8NGG8 313 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 OSR1Q8TAX0 266 aaPredicted RBP4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 TRPC4APQ8TEL6 797 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 PIK3R3Q92569 461 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 KRT35Q92764 455 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 KLHL29Q96CT2 875 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 TUBGCP3Q96CW5 907 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 OR8B2Q96RD0 313 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 SF3B5Q9BWJ5 86 aaKnown RBP4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 SHCBP1LQ9BZQ2 653 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 PRSS22Q9GZN4 317 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 RETNQ9HD89 108 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 Q9N2J8 555 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 RAB21Q9UL25 225 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 PSME2Q9UL46 239 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 PCDHGB4Q9UN71 923 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 CARD8Q9Y2G2 431 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 HDGFL3Q9Y3E1 203 aa4.08□□□□□ -1.76
SBDSP1-204ENST00000453858 A0A096LPK6 155 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 MEIOCA2RUB1 952 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 NUPR2A6NF83 97 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 SEC14L6B5MCN3 397 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 RAD51CO43502 376 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 GLRA3O75311 464 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 STK16O75716 305 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 ZNF189O75820 626 aaPredicted RBP4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 KRT33AO76009 404 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 SEMA3DO95025 777 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 PAHP00439 452 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 APRTP07741 180 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 FDFT1P37268 417 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 MPV17P39210 176 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 CRATP43155 626 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 VDAC2P45880 294 aaPredicted RBP4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 CLK1P49759 484 aaKnown RBP4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 CDH13P55290 713 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 DDX39BQ13838 428 aaKnown RBP4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 KPNB1Q14974 876 aaKnown RBP4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 CHI3L2Q15782 390 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 LRRC75BQ2VPJ9 315 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 NDUFAF6Q330K2 333 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 ANXA2RQ3ZCQ2 193 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 GALNTL6Q49A17 601 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 C11orf63Q6NUN7 778 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 CREB3L2Q70SY1 520 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 MTERF4Q7Z6M4 381 aaKnown RBP4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 IGFN1Q86VF2 1251 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 OR2L13Q8N349 312 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 L3MBTL4Q8NA19 623 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 OR51D1Q8NGF3 324 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 OR5W2Q8NH69 310 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 FGFBP3Q8TAT2 258 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 ZHX1-C8orf76Q96EF9 292 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 DUX3Q96PT4 197 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 CENPKQ9BS16 269 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 ABHD14AQ9BUJ0 271 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 CCDC106Q9BWC9 280 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 OR11A1Q9GZK7 315 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 XAB2Q9HCS7 855 aaKnown RBP4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 TCF7L2Q9NQB0 619 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 NDE1Q9NXR1 346 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 BFARQ9NZS9 450 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 TMEM181Q9P2C4 612 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 CTSZQ9UBR2 303 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 PPP1R3CQ9UQK1 317 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 KPTNQ9Y664 436 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 BZW2Q9Y6E2 419 aaKnown RBP4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 ZNF780BQ9Y6R6 833 aa4.07□□□□□ -1.76
SBDSP1-204ENST00000453858 IGLV1-36A0A0B4J1U3 117 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 A0A1B0GVI7 797 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 A0A1W2PRD5 423 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 A0A1W2PRF3 423 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 A0A1W2PRM7 423 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 A6NDX4 124 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 FAM90A20PA6NIJ5 464 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 NPIPB9F8W1W9 429 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 H0YIV9 168 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 DOK2O60496 412 aa4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 EIF1BO60739 113 aaKnown RBP4.06□□□□□ -1.76
SBDSP1-204ENST00000453858 KCNK2O95069 426 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms