RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 RGS7BPQ6MZT1 257 aaPredicted RBP17.45■□□□□ 0.38
GTF3A-202ENST00000419181 UGT2A3Q6UWM9 527 aa17.45■□□□□ 0.38
GTF3A-202ENST00000419181 ZNF620Q6ZNG0 422 aa17.45■□□□□ 0.38
GTF3A-202ENST00000419181 LINC00471Q8N535 108 aa17.45■□□□□ 0.38
GTF3A-202ENST00000419181 OR9Q2Q8NGE9 314 aa17.45■□□□□ 0.38
GTF3A-202ENST00000419181 NEU4Q8WWR8 484 aaPredicted RBP17.45■□□□□ 0.38
GTF3A-202ENST00000419181 ERMAPQ96PL5 475 aaPredicted RBP17.45■□□□□ 0.38
GTF3A-202ENST00000419181 WACQ9BTA9 647 aa17.45■□□□□ 0.38
GTF3A-202ENST00000419181 BCL2L14Q9BZR8 327 aa17.45■□□□□ 0.38
GTF3A-202ENST00000419181 OR51B6Q9H340 312 aa17.45■□□□□ 0.38
GTF3A-202ENST00000419181 EMC7Q9NPA0 242 aa17.45■□□□□ 0.38
GTF3A-202ENST00000419181 SONP18583 2426 aaKnown RBP17.45■□□□□ 0.38
GTF3A-202ENST00000419181 VWC2LB2RUY7 222 aa17.44■□□□□ 0.38
GTF3A-202ENST00000419181 NDUFS8O00217 210 aa17.44■□□□□ 0.38
GTF3A-202ENST00000419181 KHDRBS3O75525 346 aaKnown RBP17.44■□□□□ 0.38
GTF3A-202ENST00000419181 ERCC1P07992 297 aaPredicted RBP17.44■□□□□ 0.38
GTF3A-202ENST00000419181 ERVS71-1P61550 626 aa17.44■□□□□ 0.38
GTF3A-202ENST00000419181 LOXL1Q08397 574 aaPredicted RBP17.44■□□□□ 0.38
GTF3A-202ENST00000419181 TRAP1Q12931 704 aaKnown RBP17.44■□□□□ 0.38
GTF3A-202ENST00000419181 ZNF774Q6NX45 483 aa17.44■□□□□ 0.38
GTF3A-202ENST00000419181 ALDH16A1Q8IZ83 802 aa17.44■□□□□ 0.38
GTF3A-202ENST00000419181 SAMD8Q96LT4 415 aa17.44■□□□□ 0.38
GTF3A-202ENST00000419181 LRGUKQ96M69 825 aa17.44■□□□□ 0.38
GTF3A-202ENST00000419181 FOXN4Q96NZ1 517 aa17.44■□□□□ 0.38
GTF3A-202ENST00000419181 IFT27Q9BW83 186 aa17.44■□□□□ 0.38
GTF3A-202ENST00000419181 NUAK2Q9H093 628 aa17.44■□□□□ 0.38
GTF3A-202ENST00000419181 VNN3Q9NY84 501 aa17.44■□□□□ 0.38
GTF3A-202ENST00000419181 DUSP13Q9UII6 198 aa17.44■□□□□ 0.38
GTF3A-202ENST00000419181 COA3Q9Y2R0 106 aaPredicted RBP17.44■□□□□ 0.38
GTF3A-202ENST00000419181 YLPM1P49750 1951 aaKnown RBP17.44■□□□□ 0.38
GTF3A-202ENST00000419181 IGLV3-9A0A075B6K5 115 aa17.43■□□□□ 0.38
GTF3A-202ENST00000419181 LOC390937A0A1W2PQ73 354 aa17.43■□□□□ 0.38
GTF3A-202ENST00000419181 C5orf49A4QMS7 147 aa17.43■□□□□ 0.38
GTF3A-202ENST00000419181 LCKP06239 509 aa17.43■□□□□ 0.38
GTF3A-202ENST00000419181 ZNF250P15622 560 aa17.43■□□□□ 0.38
GTF3A-202ENST00000419181 CCNOP22674 350 aa17.43■□□□□ 0.38
GTF3A-202ENST00000419181 WNT5AP41221 380 aa17.43■□□□□ 0.38
GTF3A-202ENST00000419181 ALDH3B1P43353 468 aa17.43■□□□□ 0.38
GTF3A-202ENST00000419181 GDI2P50395 445 aaKnown RBP17.43■□□□□ 0.38
GTF3A-202ENST00000419181 DNAL1Q4LDG9 190 aa17.43■□□□□ 0.38
GTF3A-202ENST00000419181 OR2T5Q6IEZ7 315 aa17.43■□□□□ 0.38
GTF3A-202ENST00000419181 GLB1L2Q8IW92 636 aa17.43■□□□□ 0.38
GTF3A-202ENST00000419181 ZNF101Q8IZC7 436 aa17.43■□□□□ 0.38
GTF3A-202ENST00000419181 OR2T29Q8NH02 315 aa17.43■□□□□ 0.38
GTF3A-202ENST00000419181 SLC7A6OSQ96CW6 309 aaPredicted RBP17.43■□□□□ 0.38
GTF3A-202ENST00000419181 SNX18Q96RF0 628 aa17.43■□□□□ 0.38
GTF3A-202ENST00000419181 TPK1Q9H3S4 243 aa17.43■□□□□ 0.38
GTF3A-202ENST00000419181 MS4A5Q9H3V2 200 aa17.43■□□□□ 0.38
GTF3A-202ENST00000419181 RERGLQ9H628 205 aa17.43■□□□□ 0.38
GTF3A-202ENST00000419181 REV1Q9UBZ9 1251 aa17.43■□□□□ 0.38
GTF3A-202ENST00000419181 CDH10Q9Y6N8 788 aa17.43■□□□□ 0.38
GTF3A-202ENST00000419181 DCTN6O00399 190 aa17.42■□□□□ 0.38
GTF3A-202ENST00000419181 GYG2O15488 501 aa17.42■□□□□ 0.38
GTF3A-202ENST00000419181 ICMTO60725 284 aa17.42■□□□□ 0.38
GTF3A-202ENST00000419181 CCNB2O95067 398 aa17.42■□□□□ 0.38
GTF3A-202ENST00000419181 STAMBPO95630 424 aa17.42■□□□□ 0.38
GTF3A-202ENST00000419181 RAP2AP10114 183 aa17.42■□□□□ 0.38
GTF3A-202ENST00000419181 HIST1H1CP16403 213 aaKnown RBP17.42■□□□□ 0.38
GTF3A-202ENST00000419181 PPP2R2BQ00005 443 aa17.42■□□□□ 0.38
GTF3A-202ENST00000419181 SCRN3Q0VDG4 424 aa17.42■□□□□ 0.38
GTF3A-202ENST00000419181 PPP1R8Q12972 351 aaKnown RBP17.42■□□□□ 0.38
GTF3A-202ENST00000419181 AQP6Q13520 282 aa17.42■□□□□ 0.38
GTF3A-202ENST00000419181 MAD2L1BPQ15013 274 aaPredicted RBP17.42■□□□□ 0.38
GTF3A-202ENST00000419181 PGM2L1Q6PCE3 622 aa17.42■□□□□ 0.38
GTF3A-202ENST00000419181 ADGRG5Q8IZF4 528 aa17.42■□□□□ 0.38
GTF3A-202ENST00000419181 SYNPRQ8TBG9 265 aa17.42■□□□□ 0.38
GTF3A-202ENST00000419181 TSSK2Q96PF2 358 aa17.42■□□□□ 0.38
GTF3A-202ENST00000419181 NMNAT3Q96T66 252 aa17.42■□□□□ 0.38
GTF3A-202ENST00000419181 PIMREGQ9BSJ6 248 aa17.42■□□□□ 0.38
GTF3A-202ENST00000419181 EGLN3Q9H6Z9 239 aa17.42■□□□□ 0.38
GTF3A-202ENST00000419181 REEP1Q9H902 201 aa17.42■□□□□ 0.38
GTF3A-202ENST00000419181 SAMHD1Q9Y3Z3 626 aaKnown RBP17.42■□□□□ 0.38
GTF3A-202ENST00000419181 IGLV1-36A0A0B4J1U3 117 aa17.41■□□□□ 0.38
GTF3A-202ENST00000419181 A0A1W2PPW3 197 aa17.41■□□□□ 0.38
GTF3A-202ENST00000419181 AQP12BA6NM10 295 aa17.41■□□□□ 0.38
GTF3A-202ENST00000419181 IDH3BO43837 385 aa17.41■□□□□ 0.38
GTF3A-202ENST00000419181 MPZL1O95297 269 aa17.41■□□□□ 0.38
GTF3A-202ENST00000419181 CLPTM1O96005 669 aa17.41■□□□□ 0.38
GTF3A-202ENST00000419181 GASTP01350 101 aa17.41■□□□□ 0.38
GTF3A-202ENST00000419181 COX5BP10606 129 aa17.41■□□□□ 0.38
GTF3A-202ENST00000419181 DAOP14920 347 aa17.41■□□□□ 0.38
GTF3A-202ENST00000419181 CRABP1P29762 137 aa17.41■□□□□ 0.38
GTF3A-202ENST00000419181 NR4A2P43354 598 aa17.41■□□□□ 0.38
GTF3A-202ENST00000419181 KLF3P57682 345 aaPredicted RBP17.41■□□□□ 0.38
GTF3A-202ENST00000419181 LSM6P62312 80 aaKnown RBP17.41■□□□□ 0.38
GTF3A-202ENST00000419181 KCNMB1Q16558 191 aa17.41■□□□□ 0.38
GTF3A-202ENST00000419181 RPL13AP3Q6NVV1 102 aa17.41■□□□□ 0.38
GTF3A-202ENST00000419181 LEG1Q6P5S2 330 aa17.41■□□□□ 0.38
GTF3A-202ENST00000419181 DNM1P34Q6PK57 102 aa17.41■□□□□ 0.38
GTF3A-202ENST00000419181 JAZF1Q86VZ6 243 aa17.41■□□□□ 0.38
GTF3A-202ENST00000419181 AQP12AQ8IXF9 295 aa17.41■□□□□ 0.38
GTF3A-202ENST00000419181 OR1J1Q8NGS3 322 aa17.41■□□□□ 0.38
GTF3A-202ENST00000419181 OR4K13Q8NH42 304 aa17.41■□□□□ 0.38
GTF3A-202ENST00000419181 C11orf40Q8WZ69 217 aa17.41■□□□□ 0.38
GTF3A-202ENST00000419181 EIF3KQ9UBQ5 218 aaKnown RBP17.41■□□□□ 0.38
GTF3A-202ENST00000419181 NDRG4Q9ULP0 352 aaKnown RBP17.41■□□□□ 0.38
GTF3A-202ENST00000419181 U3KQV3 271 aa17.41■□□□□ 0.38
GTF3A-202ENST00000419181 CD5LO43866 347 aa17.4■□□□□ 0.38
GTF3A-202ENST00000419181 TP53P04637 393 aaPredicted RBP17.4■□□□□ 0.38
GTF3A-202ENST00000419181 GAAP10253 952 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms