RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 MAP2K6P52564 334 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 DBX2Q6ZNG2 339 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 KLHDC8BQ8IXV7 354 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 WDR89Q96FK6 387 aaPredicted RBP11.03□□□□□ -0.64
UBR4-205ENST00000417040 C12orf49Q9H741 205 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 GNG12Q9UBI6 72 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 NOSIPQ9Y314 301 aaKnown RBP11.03□□□□□ -0.64
UBR4-205ENST00000417040 OR6C68A6NDL8 312 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 TAF9Q16594 264 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 ACOT7LQ6ZUV0 252 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 SSX7Q7RTT5 188 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 WDR5BQ86VZ2 330 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 KCNG2Q9UJ96 466 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 ADAMTS5Q9UNA0 930 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 FAM155AB1AL88 458 aaPredicted RBP11.03□□□□□ -0.64
UBR4-205ENST00000417040 BCAT2O15382 392 aaPredicted RBP11.03□□□□□ -0.64
UBR4-205ENST00000417040 DFFBO76075 338 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 CA3P07451 260 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 HBQ1P09105 142 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 TGFBR3Q03167 851 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 BPIFCQ8NFQ6 507 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 CDCA4Q9BXL8 241 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 SRRQ9GZT4 340 aa11.03□□□□□ -0.64
UBR4-205ENST00000417040 UBR2Q8IWV8 1755 aa11.02□□□□□ -0.64
UBR4-205ENST00000417040 MED19A0JLT2 244 aaPredicted RBP11.02□□□□□ -0.64
UBR4-205ENST00000417040 SBK3P0C264 359 aa11.02□□□□□ -0.64
UBR4-205ENST00000417040 AFMIDQ63HM1 303 aa11.02□□□□□ -0.64
UBR4-205ENST00000417040 LANCL3Q6ZV70 420 aa11.02□□□□□ -0.64
UBR4-205ENST00000417040 AAED1Q7RTV5 226 aa11.02□□□□□ -0.64
UBR4-205ENST00000417040 SLC25A21Q9BQT8 299 aaPredicted RBP11.02□□□□□ -0.64
UBR4-205ENST00000417040 SAGE1Q9NXZ1 904 aa11.02□□□□□ -0.64
UBR4-205ENST00000417040 PADI1Q9ULC6 663 aa11.02□□□□□ -0.64
UBR4-205ENST00000417040 C20orf202A1L168 122 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 PPP5D1E7EU14 171 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 SOX15O60248 233 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 DUSP1P28562 367 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 GPR85P60893 370 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 KCNAB1Q14722 419 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 AGERQ15109 404 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 MARCH1Q8TCQ1 289 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 LRFN5Q96NI6 719 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 SERTM2A0A1B0GWG4 89 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 AQP7P3A6NL99 342 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 MAN2B1O00754 1011 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 ZFAND5O76080 213 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 OR2F2O95006 317 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 NFYBP25208 207 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 PCBD1P61457 104 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 CATR1Q13166 79 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 OR2F1Q13607 317 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 IHHQ14623 411 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 CD300LGQ6UXG3 332 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 ZNF595Q8IYB9 648 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 LGI3Q8N145 548 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 PPP1R35Q8TAP8 253 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 CTSFQ9UBX1 484 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 ZNF346Q9UL40 294 aaKnown RBP11.02□□□□□ -0.65
UBR4-205ENST00000417040 A3GALT2U3KPV4 340 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 LOC107986453A0A1B0GWG9 222 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 SLCO2B1O94956 709 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 CTRB1P17538 263 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 NKX2-1P43699 371 aaPredicted RBP11.02□□□□□ -0.65
UBR4-205ENST00000417040 CTRB2Q6GPI1 263 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 ATOH1Q92858 354 aaPredicted RBP11.02□□□□□ -0.65
UBR4-205ENST00000417040 FGF13Q92913 245 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 DERL3Q96Q80 235 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 OR6C1Q96RD1 312 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 MAGT1Q9H0U3 335 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 GPR171O14626 319 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 NXPH2O95156 264 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 MT-ND4LP03901 98 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 GUSBP08236 651 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 THBS3P49746 956 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 ETFRF1Q6IPR1 90 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 OPN5Q6U736 354 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 FAM173AQ9BQD7 235 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 ZNF355PQ9NSJ1 428 aa11.02□□□□□ -0.65
UBR4-205ENST00000417040 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.02□□□□□ -0.65
UBR4-205ENST00000417040 CD14P08571 375 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 PTBP1P26599 531 aaKnown RBP eCLIP11.01□□□□□ -0.651e-7■■■■■ 59.5
UBR4-205ENST00000417040 EMDP50402 254 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 EDDM3BP56851 147 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 SPANXN5Q5MJ07 72 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 SYT13Q7L8C5 426 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 OR1J2Q8NGS2 313 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 OR13C8Q8NGS7 320 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 EMG1Q92979 244 aaKnown RBP11.01□□□□□ -0.65
UBR4-205ENST00000417040 NXF2Q9GZY0 626 aaKnown RBP11.01□□□□□ -0.65
UBR4-205ENST00000417040 PRO1933Q9H354 126 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 KIR2DS5A0A0G2JLQ3 304 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 A0A0G2JNG1 304 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 KIR2DS3K7RE56 304 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 ZNF217O75362 1048 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 RGS11O94810 467 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 SFTA3P0C7M3 94 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 ACKR3P25106 362 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 P2RX1P51575 399 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 F2RL1P55085 397 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 KIR2DS5Q14953 304 aa11.01□□□□□ -0.65
UBR4-205ENST00000417040 SLC35D3Q5M8T2 416 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms