RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 R4GMQ9 66 aa16.75■□□□□ 0.27
USP49-202ENST00000373010 LOC101059948A0A1B0GTJ6 334 aa16.75■□□□□ 0.27
USP49-202ENST00000373010 ETV2O00321 342 aaPredicted RBP16.75■□□□□ 0.27
USP49-202ENST00000373010 EIF1AYO14602 144 aaKnown RBP16.75■□□□□ 0.27
USP49-202ENST00000373010 XRCC3O43542 346 aa16.75■□□□□ 0.27
USP49-202ENST00000373010 ZNF780AO75290 641 aaPredicted RBP16.75■□□□□ 0.27
USP49-202ENST00000373010 VEGFCP49767 419 aa16.75■□□□□ 0.27
USP49-202ENST00000373010 MRPS10P82664 201 aaKnown RBP16.75■□□□□ 0.27
USP49-202ENST00000373010 RAB11BQ15907 218 aa16.75■□□□□ 0.27
USP49-202ENST00000373010 C2orf76Q3KRA6 126 aa16.75■□□□□ 0.27
USP49-202ENST00000373010 THRSPQ92748 146 aa16.75■□□□□ 0.27
USP49-202ENST00000373010 FAM3DQ96BQ1 224 aa16.75■□□□□ 0.27
USP49-202ENST00000373010 MRGPRX4Q96LA9 322 aa16.75■□□□□ 0.27
USP49-202ENST00000373010 TRAF4Q9BUZ4 470 aaPredicted RBP16.75■□□□□ 0.27
USP49-202ENST00000373010 ACTR6Q9GZN1 396 aa16.75■□□□□ 0.27
USP49-202ENST00000373010 SLC26A1Q9H2B4 701 aa16.75■□□□□ 0.27
USP49-202ENST00000373010 B3GAT1Q9P2W7 334 aa16.75■□□□□ 0.27
USP49-202ENST00000373010 C19orf25Q9UFG5 118 aaPredicted RBP16.75■□□□□ 0.27
USP49-202ENST00000373010 CCDC163A0A0D9SF12 145 aa16.74■□□□□ 0.27
USP49-202ENST00000373010 PEX14O75381 377 aa16.74■□□□□ 0.27
USP49-202ENST00000373010 CTAG2O75638 210 aa16.74■□□□□ 0.27
USP49-202ENST00000373010 KDM4BO94953 1096 aa16.74■□□□□ 0.27
USP49-202ENST00000373010 MSX1P28360 303 aa16.74■□□□□ 0.27
USP49-202ENST00000373010 MAP2K6P52564 334 aa16.74■□□□□ 0.27
USP49-202ENST00000373010 C6orf183Q5T699 404 aa16.74■□□□□ 0.27
USP49-202ENST00000373010 SLC22A8Q8TCC7 542 aa16.74■□□□□ 0.27
USP49-202ENST00000373010 HYLS1Q96M11 299 aa16.74■□□□□ 0.27
USP49-202ENST00000373010 CMKLR1Q99788 373 aa16.74■□□□□ 0.27
USP49-202ENST00000373010 GON7Q9BXV9 100 aa16.74■□□□□ 0.27
USP49-202ENST00000373010 ZFP64Q9NPA5 681 aa16.74■□□□□ 0.27
USP49-202ENST00000373010 G6PC2Q9NQR9 355 aa16.74■□□□□ 0.27
USP49-202ENST00000373010 CENPMQ9NSP4 180 aa16.74■□□□□ 0.27
USP49-202ENST00000373010 B3GALT5Q9Y2C3 310 aa16.74■□□□□ 0.27
USP49-202ENST00000373010 A0A1W2PNR3 127 aa16.74■□□□□ 0.27
USP49-202ENST00000373010 NAP1L6A6NFF2 107 aa16.74■□□□□ 0.27
USP49-202ENST00000373010 SLC17A2O00624 439 aa16.74■□□□□ 0.27
USP49-202ENST00000373010 ARPC1BO15143 372 aaKnown RBP16.74■□□□□ 0.27
USP49-202ENST00000373010 SSNA1O43805 119 aa16.74■□□□□ 0.27
USP49-202ENST00000373010 LMX1BO60663 402 aa16.74■□□□□ 0.27
USP49-202ENST00000373010 LDOC1O95751 146 aaPredicted RBP16.74■□□□□ 0.27
USP49-202ENST00000373010 ANXA3P12429 323 aa16.74■□□□□ 0.27
USP49-202ENST00000373010 HOXA6P31267 233 aa16.74■□□□□ 0.27
USP49-202ENST00000373010 PCK2Q16822 640 aa16.74■□□□□ 0.27
USP49-202ENST00000373010 SLC25A53Q5H9E4 307 aa16.74■□□□□ 0.27
USP49-202ENST00000373010 OLFML2AQ68BL7 652 aa16.74■□□□□ 0.27
USP49-202ENST00000373010 ANKRD16Q6P6B7 361 aa16.74■□□□□ 0.27
USP49-202ENST00000373010 WDR5BQ86VZ2 330 aa16.74■□□□□ 0.27
USP49-202ENST00000373010 OR2M3Q8NG83 312 aa16.74■□□□□ 0.27
USP49-202ENST00000373010 SPACA9Q96E40 222 aaPredicted RBP16.74■□□□□ 0.27
USP49-202ENST00000373010 IGLV3-32A0A0A0MS00 114 aa16.73■□□□□ 0.27
USP49-202ENST00000373010 ALDOBP05062 364 aa16.73■□□□□ 0.27
USP49-202ENST00000373010 EIF1AXP47813 144 aaKnown RBP16.73■□□□□ 0.27
USP49-202ENST00000373010 SCAND1P57086 179 aa16.73■□□□□ 0.27
USP49-202ENST00000373010 C9orf62Q8N4C0 152 aa16.73■□□□□ 0.27
USP49-202ENST00000373010 OR1J4Q8NGS1 313 aa16.73■□□□□ 0.27
USP49-202ENST00000373010 SLC25A44Q96H78 314 aaPredicted RBP16.73■□□□□ 0.27
USP49-202ENST00000373010 SDHAF3Q9NRP4 125 aa16.73■□□□□ 0.27
USP49-202ENST00000373010 ZNF275Q9NSD4 429 aaPredicted RBP16.73■□□□□ 0.27
USP49-202ENST00000373010 OR52A1Q9UKL2 312 aa16.73■□□□□ 0.27
USP49-202ENST00000373010 CDV3Q9UKY7 258 aaKnown RBP16.73■□□□□ 0.27
USP49-202ENST00000373010 LOC107986453A0A1B0GWG9 222 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 GGT3PA6NGU5 568 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 NPIPB13A6NJU9 1138 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 NPIPB4C9JG80 1138 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 DKK1O94907 266 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 SULT1A3P0DMM9 295 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 SULT1A4P0DMN0 295 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 FGF5P12034 268 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 TDGF1P13385 188 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 GUCA2AQ02747 115 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 LINC00303Q3SY05 128 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 ELFN2Q5R3F8 820 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 PRAMEF20Q5VT98 475 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 FAM166AQ6J272 317 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 OR51A2Q8NGJ7 313 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 OR13C3Q8NGS6 347 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 C11orf40Q8WZ69 217 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 CGGBP1Q9UFW8 167 aaPredicted RBP16.72■□□□□ 0.27
USP49-202ENST00000373010 ING4Q9UNL4 249 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 PHF3Q92576 2039 aaKnown RBP16.72■□□□□ 0.27
USP49-202ENST00000373010 COL6A3P12111 3177 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 TRAV18A0A075B6X5 111 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 TMEM272A0A1B0GTI8 110 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 TMEM269A0A1B0GVZ9 245 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 A0A1W2PPC1 479 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 CD2P06729 351 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 CFPP27918 469 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 PCOLCEQ15113 449 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 NHLRC1Q6VVB1 395 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 DNM1P46Q6ZS02 220 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 Q6ZTK2 550 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 OR11H4Q8NGC9 324 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 C15orf40Q8WUR7 153 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 GUCD1Q96NT3 240 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 HHLA2Q9UM44 414 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 B3GALT1Q9Y5Z6 326 aa16.72■□□□□ 0.27
USP49-202ENST00000373010 LOC100289279A0A1B0GTE1 492 aa16.71■□□□□ 0.27
USP49-202ENST00000373010 TEX51A0A1B0GUA7 166 aa16.71■□□□□ 0.27
USP49-202ENST00000373010 MEIS3P1A6NDR6 274 aa16.71■□□□□ 0.27
USP49-202ENST00000373010 ZNF814B7Z6K7 855 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms