RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 GLO1Q04760 184 aa16.58■□□□□ 0.24
SYNE4-202ENST00000340477 AQP6Q13520 282 aa16.58■□□□□ 0.24
SYNE4-202ENST00000340477 SLC35F1Q5T1Q4 408 aa16.58■□□□□ 0.24
SYNE4-202ENST00000340477 OR52E2Q8NGJ4 325 aa16.58■□□□□ 0.24
SYNE4-202ENST00000340477 FOXN4Q96NZ1 517 aa16.58■□□□□ 0.24
SYNE4-202ENST00000340477 FEVQ99581 238 aa16.58■□□□□ 0.24
SYNE4-202ENST00000340477 RACGAP1Q9H0H5 632 aa16.58■□□□□ 0.24
SYNE4-202ENST00000340477 DYNLRB1Q9NP97 96 aa16.58■□□□□ 0.24
SYNE4-202ENST00000340477 RPRD1BQ9NQG5 326 aaKnown RBP16.58■□□□□ 0.24
SYNE4-202ENST00000340477 KLHL21Q9UJP4 597 aa16.58■□□□□ 0.24
SYNE4-202ENST00000340477 NDRG4Q9ULP0 352 aaKnown RBP16.58■□□□□ 0.24
SYNE4-202ENST00000340477 BHLHE40O14503 412 aa16.57■□□□□ 0.24
SYNE4-202ENST00000340477 IGHV4-39P01824 125 aa16.57■□□□□ 0.24
SYNE4-202ENST00000340477 HLA-DQA2P01906 255 aa16.57■□□□□ 0.24
SYNE4-202ENST00000340477 FCGR1AP12314 374 aa16.57■□□□□ 0.24
SYNE4-202ENST00000340477 ANXA8P13928 327 aa16.57■□□□□ 0.24
SYNE4-202ENST00000340477 RAD52P43351 418 aa16.57■□□□□ 0.24
SYNE4-202ENST00000340477 PSG4Q00888 419 aa16.57■□□□□ 0.24
SYNE4-202ENST00000340477 ENDOGQ14249 297 aaKnown RBP16.57■□□□□ 0.24
SYNE4-202ENST00000340477 SWI5Q1ZZU3 235 aa16.57■□□□□ 0.24
SYNE4-202ENST00000340477 SLC36A3Q495N2 470 aa16.57■□□□□ 0.24
SYNE4-202ENST00000340477 RGS7BPQ6MZT1 257 aaPredicted RBP16.57■□□□□ 0.24
SYNE4-202ENST00000340477 ARL9Q6T311 187 aa16.57■□□□□ 0.24
SYNE4-202ENST00000340477 CD300LDQ6UXZ3 194 aa16.57■□□□□ 0.24
SYNE4-202ENST00000340477 KRTAP1-3Q8IUG1 177 aa16.57■□□□□ 0.24
SYNE4-202ENST00000340477 AKR7LQ8NHP1 331 aa16.57■□□□□ 0.24
SYNE4-202ENST00000340477 TMUB1Q9BVT8 246 aa16.57■□□□□ 0.24
SYNE4-202ENST00000340477 PLA2G12AQ9BZM1 189 aa16.57■□□□□ 0.24
SYNE4-202ENST00000340477 BCL2L14Q9BZR8 327 aa16.57■□□□□ 0.24
SYNE4-202ENST00000340477 SRA1Q9HD15 236 aaKnown RBP16.57■□□□□ 0.24
SYNE4-202ENST00000340477 HIVEP1P15822 2718 aa16.56■□□□□ 0.24
SYNE4-202ENST00000340477 FLNAP21333 2647 aaKnown RBP16.56■□□□□ 0.24
SYNE4-202ENST00000340477 MED13LQ71F56 2210 aa16.56■□□□□ 0.24
SYNE4-202ENST00000340477 C5orf49A4QMS7 147 aa16.56■□□□□ 0.24
SYNE4-202ENST00000340477 RIIAD1A6NNX1 92 aa16.56■□□□□ 0.24
SYNE4-202ENST00000340477 DOK2O60496 412 aa16.56■□□□□ 0.24
SYNE4-202ENST00000340477 TIPRLO75663 272 aa16.56■□□□□ 0.24
SYNE4-202ENST00000340477 LCKP06239 509 aa16.56■□□□□ 0.24
SYNE4-202ENST00000340477 FAM157BP0CG42 384 aa16.56■□□□□ 0.24
SYNE4-202ENST00000340477 CCL2P13500 99 aa16.56■□□□□ 0.24
SYNE4-202ENST00000340477 PCSK6P29122 969 aa16.56■□□□□ 0.24
SYNE4-202ENST00000340477 PPOXP50336 477 aa16.56■□□□□ 0.24
SYNE4-202ENST00000340477 CLEC12BQ2HXU8 276 aa16.56■□□□□ 0.24
SYNE4-202ENST00000340477 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.56■□□□□ 0.24
SYNE4-202ENST00000340477 SVOPLQ8N434 492 aa16.56■□□□□ 0.24
SYNE4-202ENST00000340477 LNX2Q8N448 690 aa16.56■□□□□ 0.24
SYNE4-202ENST00000340477 ATG16L2Q8NAA4 619 aa16.56■□□□□ 0.24
SYNE4-202ENST00000340477 ICA1LQ8NDH6 482 aa16.56■□□□□ 0.24
SYNE4-202ENST00000340477 OR2T4Q8NH00 348 aa16.56■□□□□ 0.24
SYNE4-202ENST00000340477 DNAJC9Q8WXX5 260 aa16.56■□□□□ 0.24
SYNE4-202ENST00000340477 MRPL24Q96A35 216 aaKnown RBP16.56■□□□□ 0.24
SYNE4-202ENST00000340477 NRBF2Q96F24 287 aa16.56■□□□□ 0.24
SYNE4-202ENST00000340477 TSSK2Q96PF2 358 aa16.56■□□□□ 0.24
SYNE4-202ENST00000340477 VRK1Q99986 396 aaPredicted RBP16.56■□□□□ 0.24
SYNE4-202ENST00000340477 NIPSNAP1Q9BPW8 284 aa16.56■□□□□ 0.24
SYNE4-202ENST00000340477 TEX12Q9BXU0 123 aa16.56■□□□□ 0.24
SYNE4-202ENST00000340477 WNT5BQ9H1J7 359 aa16.56■□□□□ 0.24
SYNE4-202ENST00000340477 ARMC1Q9NVT9 282 aa16.56■□□□□ 0.24
SYNE4-202ENST00000340477 GDF2Q9UK05 429 aaPredicted RBP16.56■□□□□ 0.24
SYNE4-202ENST00000340477 B9D1Q9UPM9 204 aa16.56■□□□□ 0.24
SYNE4-202ENST00000340477 SGCEO43556 437 aa16.55■□□□□ 0.24
SYNE4-202ENST00000340477 GPRIN2O60269 458 aa16.55■□□□□ 0.24
SYNE4-202ENST00000340477 FOSL1P15407 271 aa16.55■□□□□ 0.24
SYNE4-202ENST00000340477 ZNF3P17036 446 aa16.55■□□□□ 0.24
SYNE4-202ENST00000340477 FASP25445 335 aa16.55■□□□□ 0.24
SYNE4-202ENST00000340477 HTR5AP47898 357 aa16.55■□□□□ 0.24
SYNE4-202ENST00000340477 EVX1P49640 407 aa16.55■□□□□ 0.24
SYNE4-202ENST00000340477 ZNF774Q6NX45 483 aa16.55■□□□□ 0.24
SYNE4-202ENST00000340477 SHQ1Q6PI26 577 aaKnown RBP16.55■□□□□ 0.24
SYNE4-202ENST00000340477 CLEC2AQ6UVW9 174 aa16.55■□□□□ 0.24
SYNE4-202ENST00000340477 UGT2A3Q6UWM9 527 aa16.55■□□□□ 0.24
SYNE4-202ENST00000340477 ASRGL1Q7L266 308 aa16.55■□□□□ 0.24
SYNE4-202ENST00000340477 C1orf174Q8IYL3 243 aa16.55■□□□□ 0.24
SYNE4-202ENST00000340477 CPEB3Q8NE35 698 aaKnown RBP16.55■□□□□ 0.24
SYNE4-202ENST00000340477 PROKR2Q8NFJ6 384 aa16.55■□□□□ 0.24
SYNE4-202ENST00000340477 OR8D4Q8NGM9 314 aa16.55■□□□□ 0.24
SYNE4-202ENST00000340477 C11orf40Q8WZ69 217 aa16.55■□□□□ 0.24
SYNE4-202ENST00000340477 SLCO4A1Q96BD0 722 aa16.55■□□□□ 0.24
SYNE4-202ENST00000340477 RAB1BQ9H0U4 201 aa16.55■□□□□ 0.24
SYNE4-202ENST00000340477 OR51B6Q9H340 312 aa16.55■□□□□ 0.24
SYNE4-202ENST00000340477 PLEK2Q9NYT0 353 aa16.55■□□□□ 0.24
SYNE4-202ENST00000340477 ASH2LQ9UBL3 628 aa16.55■□□□□ 0.24
SYNE4-202ENST00000340477 GPR160Q9UJ42 338 aa16.55■□□□□ 0.24
SYNE4-202ENST00000340477 AP4S1Q9Y587 144 aa16.55■□□□□ 0.24
SYNE4-202ENST00000340477 IGLV1-36A0A0B4J1U3 117 aa16.54■□□□□ 0.24
SYNE4-202ENST00000340477 A0A1W2PPW3 197 aa16.54■□□□□ 0.24
SYNE4-202ENST00000340477 OR6C68A6NDL8 312 aa16.54■□□□□ 0.24
SYNE4-202ENST00000340477 SSX4O60224 188 aa16.54■□□□□ 0.24
SYNE4-202ENST00000340477 CSF3P09919 207 aa16.54■□□□□ 0.24
SYNE4-202ENST00000340477 COX5BP10606 129 aa16.54■□□□□ 0.24
SYNE4-202ENST00000340477 POU1F1P28069 291 aa16.54■□□□□ 0.24
SYNE4-202ENST00000340477 EFNA4P52798 201 aa16.54■□□□□ 0.24
SYNE4-202ENST00000340477 UCP2P55851 309 aa16.54■□□□□ 0.24
SYNE4-202ENST00000340477 DSCR9P59020 149 aa16.54■□□□□ 0.24
SYNE4-202ENST00000340477 KCNMB1Q16558 191 aa16.54■□□□□ 0.24
SYNE4-202ENST00000340477 MST1LQ2TV78 715 aa16.54■□□□□ 0.24
SYNE4-202ENST00000340477 TMEM179BQ7Z7N9 219 aa16.54■□□□□ 0.24
SYNE4-202ENST00000340477 ZBTB46Q86UZ6 589 aa16.54■□□□□ 0.24
SYNE4-202ENST00000340477 OR6V1Q8N148 313 aa16.54■□□□□ 0.24
SYNE4-202ENST00000340477 PAQR4Q8N4S7 273 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms