RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 APODP05090 189 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 H1F0P07305 194 aaKnown RBP6.03□□□□□ -1.44
ZNF540-201ENST00000316433 FCGR3AP08637 254 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 OR12D1P0DN82 309 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 HTR1FP30939 366 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 THPOP40225 353 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 CAPZBP47756 277 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 MNX1P50219 401 aaPredicted RBP6.03□□□□□ -1.44
ZNF540-201ENST00000316433 RPS24P62847 133 aaKnown RBP6.03□□□□□ -1.44
ZNF540-201ENST00000316433 ATXN7L3Q14CW9 347 aaPredicted RBP6.03□□□□□ -1.44
ZNF540-201ENST00000316433 ZIC1Q15915 447 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 TMEM52BQ4KMG9 183 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 NKAIN1Q4KMZ8 207 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 ZNF385BQ569K4 471 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 LY6G6FQ5SQ64 297 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 TCTN3Q6NUS6 607 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 BTNL3Q6UXE8 466 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 VRK2Q86Y07 508 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 GPR32P1Q8NGA4 272 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 OR4S1Q8NGB4 309 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 OR9A4Q8NGU2 314 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 C15orf40Q8WUR7 153 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 HAS2Q92819 552 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 SHDQ96IW2 340 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 FAM71F1Q96KD3 344 aaPredicted RBP6.03□□□□□ -1.44
ZNF540-201ENST00000316433 OR5B2Q96R09 309 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 PLEKHA2Q9HB19 425 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 MSL2Q9HCI7 577 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 COMMD9Q9P000 198 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 SERGEFQ9UGK8 458 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 KCNG2Q9UJ96 466 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 LSM7Q9UK45 103 aaKnown RBP6.03□□□□□ -1.44
ZNF540-201ENST00000316433 YIPF1Q9Y548 306 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 OR1F1O43749 312 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 ATP1B1P05026 303 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 ANXA4P09525 319 aaPredicted RBP6.03□□□□□ -1.44
ZNF540-201ENST00000316433 NT5EP21589 574 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 HBA1P69905 142 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 NAAAQ02083 359 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 DUSP8Q13202 625 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 OR7A5Q15622 319 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 VWA2Q5GFL6 755 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 MRM1Q6IN84 353 aaKnown RBP6.03□□□□□ -1.44
ZNF540-201ENST00000316433 ADNP2Q6IQ32 1131 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 SMARCD3Q6STE5 483 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 TMEM108Q6UXF1 575 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 TMPPEQ6ZT21 453 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 NDUFAF7Q7L592 441 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 OR4E2Q8NGC2 313 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 OR13D1Q8NGV5 346 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 SUN3Q8TAQ9 357 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 APOLD1Q96LR9 279 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 UCN2Q96RP3 112 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 MS4A8Q9BY19 250 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 EXO5Q9H790 373 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 CREBZFQ9NS37 354 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 ZNF337Q9Y3M9 751 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 MMP24Q9Y5R2 645 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 COLEC10Q9Y6Z7 277 aa6.03□□□□□ -1.44
ZNF540-201ENST00000316433 TRBC2A0A5B9 178 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 NPIPA2E9PIF3 369 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 NPIPA7E9PJI5 369 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 FAM227AF5H4B4 570 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 PEX12O00623 359 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 AGPAT2O15120 278 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 CLEC3AO75596 197 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 CSTAP01040 98 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 TGFB1P01137 390 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 OPN1SWP03999 348 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 CST2P09228 141 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 NPIPA8P0DM63 369 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 SNRPBP14678 240 aaKnown RBP6.02□□□□□ -1.44
ZNF540-201ENST00000316433 NAA10P41227 235 aaPredicted RBP6.02□□□□□ -1.44
ZNF540-201ENST00000316433 KHKP50053 298 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 SSBP1Q04837 148 aaKnown RBP6.02□□□□□ -1.44
ZNF540-201ENST00000316433 SRSF4Q08170 494 aaKnown RBP6.02□□□□□ -1.44
ZNF540-201ENST00000316433 RASGEF1BQ0VAM2 473 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 GPNMBQ14956 572 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 TAF13Q15543 124 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 TEX38Q6PEX7 206 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 TMEM220Q6QAJ8 160 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 FAM151BQ6UXP7 276 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 ADAMTSL4Q6UY14 1074 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 SLC35E3Q7Z769 313 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 S100A7AQ86SG5 101 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 MCEMP1Q8IX19 187 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 SLC35G3Q8N808 338 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 INO80EQ8NBZ0 244 aaPredicted RBP6.02□□□□□ -1.44
ZNF540-201ENST00000316433 OR4D9Q8NGE8 314 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 OR1L6Q8NGR2 347 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 LIPHQ8WWY8 451 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 CDS1Q92903 461 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 PPCDCQ96CD2 204 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 COX14Q96I36 57 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 PCGF1Q9BSM1 259 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 ABRACLQ9P1F3 81 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 PADI1Q9ULC6 663 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 FOXJ3Q9UPW0 622 aa6.02□□□□□ -1.44
ZNF540-201ENST00000316433 A0A0A6YYD5 115 aa6.02□□□□□ -1.45
ZNF540-201ENST00000316433 KIR2DL5BA0A0G2JN68 375 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms