RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 TAAR8Q969N4 342 aa11.55□□□□□ -0.56
SNX1-214ENST00000625244 NUDT16L1Q9BRJ7 211 aaKnown RBP11.55□□□□□ -0.56
SNX1-214ENST00000625244 TMEM120AQ9BXJ8 343 aa11.55□□□□□ -0.56
SNX1-214ENST00000625244 SDR39U1Q9NRG7 319 aaPredicted RBP11.55□□□□□ -0.56
SNX1-214ENST00000625244 KLHL14Q9P2G3 628 aa11.55□□□□□ -0.56
SNX1-214ENST00000625244 ZDHHC8Q9ULC8 765 aa11.55□□□□□ -0.56
SNX1-214ENST00000625244 CENPVL3A0A0U1RRI6 287 aa11.54□□□□□ -0.56
SNX1-214ENST00000625244 HMGN4O00479 90 aa11.54□□□□□ -0.56
SNX1-214ENST00000625244 RNASET2O00584 256 aaKnown RBP11.54□□□□□ -0.56
SNX1-214ENST00000625244 IL6P05231 212 aa11.54□□□□□ -0.56
SNX1-214ENST00000625244 SFTPBP07988 381 aa11.54□□□□□ -0.56
SNX1-214ENST00000625244 RPS2P15880 293 aaKnown RBP11.54□□□□□ -0.56
SNX1-214ENST00000625244 GNA13Q14344 377 aa11.54□□□□□ -0.56
SNX1-214ENST00000625244 ZNF718Q3SXZ3 478 aa11.54□□□□□ -0.56
SNX1-214ENST00000625244 DEFB121Q5J5C9 76 aa11.54□□□□□ -0.56
SNX1-214ENST00000625244 SPANXN4Q5MJ08 99 aa11.54□□□□□ -0.56
SNX1-214ENST00000625244 METTL21CQ5VZV1 264 aa11.54□□□□□ -0.56
SNX1-214ENST00000625244 DHRS7BQ6IAN0 325 aaPredicted RBP11.54□□□□□ -0.56
SNX1-214ENST00000625244 OR4F3Q6IEY1 312 aa11.54□□□□□ -0.56
SNX1-214ENST00000625244 WDR88Q6ZMY6 472 aa11.54□□□□□ -0.56
SNX1-214ENST00000625244 SNX32Q86XE0 403 aa11.54□□□□□ -0.56
SNX1-214ENST00000625244 KLBQ86Z14 1044 aa11.54□□□□□ -0.56
SNX1-214ENST00000625244 ZNF101Q8IZC7 436 aa11.54□□□□□ -0.56
SNX1-214ENST00000625244 OR4A15Q8NGL6 344 aa11.54□□□□□ -0.56
SNX1-214ENST00000625244 KLF14Q8TD94 323 aaPredicted RBP11.54□□□□□ -0.56
SNX1-214ENST00000625244 TRNT1Q96Q11 434 aaKnown RBP11.54□□□□□ -0.56
SNX1-214ENST00000625244 OR52E6Q96RD3 313 aa11.54□□□□□ -0.56
SNX1-214ENST00000625244 PCGF1Q9BSM1 259 aa11.54□□□□□ -0.56
SNX1-214ENST00000625244 C1orf198Q9H425 327 aa11.54□□□□□ -0.56
SNX1-214ENST00000625244 RMND5AQ9H871 391 aa11.54□□□□□ -0.56
SNX1-214ENST00000625244 MTHFD2LQ9H903 347 aaPredicted RBP11.54□□□□□ -0.56
SNX1-214ENST00000625244 RNF121Q9H920 327 aa11.54□□□□□ -0.56
SNX1-214ENST00000625244 CYSLTR2Q9NS75 346 aa11.54□□□□□ -0.56
SNX1-214ENST00000625244 ACOXLQ9NUZ1 547 aa11.54□□□□□ -0.56
SNX1-214ENST00000625244 PRSS51A0A1B0GVH4 220 aa11.53□□□□□ -0.56
SNX1-214ENST00000625244 GMNCA6NCL1 334 aa11.53□□□□□ -0.56
SNX1-214ENST00000625244 DBIP07108 87 aaKnown RBP11.53□□□□□ -0.56
SNX1-214ENST00000625244 UQCRC2P22695 453 aa11.53□□□□□ -0.56
SNX1-214ENST00000625244 WNT5AP41221 380 aa11.53□□□□□ -0.56
SNX1-214ENST00000625244 POLR2JP52435 117 aaKnown RBP11.53□□□□□ -0.56
SNX1-214ENST00000625244 CD69Q07108 199 aa11.53□□□□□ -0.56
SNX1-214ENST00000625244 COX20Q5RI15 118 aa11.53□□□□□ -0.56
SNX1-214ENST00000625244 TMEM53Q6P2H8 277 aa11.53□□□□□ -0.56
SNX1-214ENST00000625244 ZNF836Q6ZNA1 936 aa11.53□□□□□ -0.56
SNX1-214ENST00000625244 LRRC74BQ6ZQY2 392 aa11.53□□□□□ -0.56
SNX1-214ENST00000625244 VRK2Q86Y07 508 aa11.53□□□□□ -0.56
SNX1-214ENST00000625244 LDLRAD3Q86YD5 345 aa11.53□□□□□ -0.56
SNX1-214ENST00000625244 TRIML2Q8N7C3 387 aa11.53□□□□□ -0.56
SNX1-214ENST00000625244 OR1J2Q8NGS2 313 aa11.53□□□□□ -0.56
SNX1-214ENST00000625244 SLC25A40Q8TBP6 338 aa11.53□□□□□ -0.56
SNX1-214ENST00000625244 GATAD2BQ8WXI9 593 aa11.53□□□□□ -0.56
SNX1-214ENST00000625244 CDADC1Q9BWV3 514 aa11.53□□□□□ -0.56
SNX1-214ENST00000625244 OR2J1Q9GZK6 312 aa11.53□□□□□ -0.56
SNX1-214ENST00000625244 FAM107BQ9H098 131 aa11.53□□□□□ -0.56
SNX1-214ENST00000625244 TMEM165Q9HC07 324 aa11.53□□□□□ -0.56
SNX1-214ENST00000625244 FOXJ3Q9UPW0 622 aa11.53□□□□□ -0.56
SNX1-214ENST00000625244 HERC2O95714 4834 aa11.53□□□□□ -0.56
SNX1-214ENST00000625244 PCLOQ9Y6V0 5065 aa11.53□□□□□ -0.56
SNX1-214ENST00000625244 HUWE1Q7Z6Z7 4374 aaKnown RBP11.53□□□□□ -0.56
SNX1-214ENST00000625244 A0A0U1RQK1 487 aa11.52□□□□□ -0.57
SNX1-214ENST00000625244 CCDC154A6NI56 674 aa11.52□□□□□ -0.57
SNX1-214ENST00000625244 ZNF726A6NNF4 738 aa11.52□□□□□ -0.57
SNX1-214ENST00000625244 MGRN1O60291 552 aa11.52□□□□□ -0.57
SNX1-214ENST00000625244 ZNF205O95201 554 aa11.52□□□□□ -0.57
SNX1-214ENST00000625244 ANP32DO95626 131 aa11.52□□□□□ -0.57
SNX1-214ENST00000625244 CPSF4O95639 269 aaKnown RBP11.52□□□□□ -0.57
SNX1-214ENST00000625244 CCNOP22674 350 aa11.52□□□□□ -0.57
SNX1-214ENST00000625244 LIPAP38571 399 aa11.52□□□□□ -0.57
SNX1-214ENST00000625244 MRPL19P49406 292 aaKnown RBP11.52□□□□□ -0.57
SNX1-214ENST00000625244 GYS2P54840 703 aa11.52□□□□□ -0.57
SNX1-214ENST00000625244 SF3A3Q12874 501 aaKnown RBP eCLIP11.52□□□□□ -0.57
SNX1-214ENST00000625244 MBNL2Q5VZF2 373 aaKnown RBP11.52□□□□□ -0.57
SNX1-214ENST00000625244 SLC27A4Q6P1M0 643 aa11.52□□□□□ -0.57
SNX1-214ENST00000625244 MSANTD1Q6ZTZ1 278 aa11.52□□□□□ -0.57
SNX1-214ENST00000625244 ANKRD46Q86W74 232 aa11.52□□□□□ -0.57
SNX1-214ENST00000625244 LYG1Q8N1E2 194 aa11.52□□□□□ -0.57
SNX1-214ENST00000625244 MUC20Q8N307 709 aaPredicted RBP11.52□□□□□ -0.57
SNX1-214ENST00000625244 CFHR4Q92496 578 aa11.52□□□□□ -0.57
SNX1-214ENST00000625244 SAMD8Q96LT4 415 aa11.52□□□□□ -0.57
SNX1-214ENST00000625244 PANX1Q96RD7 426 aa11.52□□□□□ -0.57
SNX1-214ENST00000625244 LRMDAQ9H2I8 198 aa11.52□□□□□ -0.57
SNX1-214ENST00000625244 FN3KRPQ9HA64 309 aa11.52□□□□□ -0.57
SNX1-214ENST00000625244 TMEM38BQ9NVV0 291 aa11.52□□□□□ -0.57
SNX1-214ENST00000625244 CCDC167Q9P0B6 97 aa11.52□□□□□ -0.57
SNX1-214ENST00000625244 PRDM4Q9UKN5 801 aa11.52□□□□□ -0.57
SNX1-214ENST00000625244 SIGLEC9Q9Y336 463 aa11.52□□□□□ -0.57
SNX1-214ENST00000625244 IQCMA0A1B0GVH7 501 aa11.51□□□□□ -0.57
SNX1-214ENST00000625244 WI2-2373I1.2A0A1W2PRP0 233 aa11.51□□□□□ -0.57
SNX1-214ENST00000625244 TMEM178BH3BS89 294 aa11.51□□□□□ -0.57
SNX1-214ENST00000625244 RFXANKO14593 260 aa11.51□□□□□ -0.57
SNX1-214ENST00000625244 OR2T1O43869 369 aa11.51□□□□□ -0.57
SNX1-214ENST00000625244 PTHP01270 115 aa11.51□□□□□ -0.57
SNX1-214ENST00000625244 NQO1P15559 274 aaKnown RBP11.51□□□□□ -0.57
SNX1-214ENST00000625244 CFHR2P36980 270 aa11.51□□□□□ -0.57
SNX1-214ENST00000625244 CSNK1A1P48729 337 aa11.51□□□□□ -0.57
SNX1-214ENST00000625244 ANXA11P50995 505 aaKnown RBP11.51□□□□□ -0.57
SNX1-214ENST00000625244 CDK5R2Q13319 367 aa11.51□□□□□ -0.57
SNX1-214ENST00000625244 NRN1LQ496H8 165 aa11.51□□□□□ -0.57
SNX1-214ENST00000625244 AGKQ53H12 422 aa11.51□□□□□ -0.57
SNX1-214ENST00000625244 FAM69AQ5T7M9 428 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms