RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 CDH11P55287 796 aa17.39■□□□□ 0.37
PDLIM2-221ENST00000622702 CDK5R2Q13319 367 aa17.39■□□□□ 0.37
PDLIM2-221ENST00000622702 TMED1Q13445 227 aa17.39■□□□□ 0.37
PDLIM2-221ENST00000622702 KCNMB1Q16558 191 aa17.39■□□□□ 0.37
PDLIM2-221ENST00000622702 LCN1P1Q5VSP4 162 aa17.39■□□□□ 0.37
PDLIM2-221ENST00000622702 ZNF787Q6DD87 383 aa17.39■□□□□ 0.37
PDLIM2-221ENST00000622702 ANKRD16Q6P6B7 361 aa17.39■□□□□ 0.37
PDLIM2-221ENST00000622702 OR1K1Q8NGR3 316 aa17.39■□□□□ 0.37
PDLIM2-221ENST00000622702 OR6K6Q8NGW6 343 aa17.39■□□□□ 0.37
PDLIM2-221ENST00000622702 CNIH3Q8TBE1 160 aa17.39■□□□□ 0.37
PDLIM2-221ENST00000622702 KISS1RQ969F8 398 aaPredicted RBP17.39■□□□□ 0.37
PDLIM2-221ENST00000622702 NABP1Q96AH0 204 aa17.39■□□□□ 0.37
PDLIM2-221ENST00000622702 NELFAQ9H3P2 528 aa17.39■□□□□ 0.37
PDLIM2-221ENST00000622702 SEC61A2Q9H9S3 476 aa17.39■□□□□ 0.37
PDLIM2-221ENST00000622702 SIAEQ9HAT2 523 aa17.39■□□□□ 0.37
PDLIM2-221ENST00000622702 POLE4Q9NR33 117 aa17.39■□□□□ 0.37
PDLIM2-221ENST00000622702 HAO2Q9NYQ3 351 aa17.39■□□□□ 0.37
PDLIM2-221ENST00000622702 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.39■□□□□ 0.37
PDLIM2-221ENST00000622702 SH3D21A4FU49 640 aa17.38■□□□□ 0.37
PDLIM2-221ENST00000622702 MSR1P21757 451 aa17.38■□□□□ 0.37
PDLIM2-221ENST00000622702 FMO3P31513 532 aa17.38■□□□□ 0.37
PDLIM2-221ENST00000622702 RPS7P62081 194 aaKnown RBP17.38■□□□□ 0.37
PDLIM2-221ENST00000622702 GABRA6Q16445 453 aa17.38■□□□□ 0.37
PDLIM2-221ENST00000622702 OR7E24Q6IFN5 339 aa17.38■□□□□ 0.37
PDLIM2-221ENST00000622702 ZNF813Q6ZN06 617 aa17.38■□□□□ 0.37
PDLIM2-221ENST00000622702 BCL2L2Q92843 193 aaPredicted RBP17.38■□□□□ 0.37
PDLIM2-221ENST00000622702 RNASE6Q93091 150 aaKnown RBP17.38■□□□□ 0.37
PDLIM2-221ENST00000622702 CNBD2Q96M20 576 aa17.38■□□□□ 0.37
PDLIM2-221ENST00000622702 FOXN4Q96NZ1 517 aa17.38■□□□□ 0.37
PDLIM2-221ENST00000622702 MARCH7Q9H992 704 aa17.38■□□□□ 0.37
PDLIM2-221ENST00000622702 WARS2Q9UGM6 360 aaKnown RBP17.38■□□□□ 0.37
PDLIM2-221ENST00000622702 CIB4A0PJX0 185 aa17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 SEC14L2O76054 403 aa17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 GPANK1O95872 356 aa17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 TFP02787 698 aa17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 OR8G3PP0DMU2 310 aa17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 COX6B1P14854 86 aa17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 B4GALT1P15291 398 aa17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 GSTT1P30711 240 aa17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 FAM27E3Q08E93 113 aa17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 GGTLC2Q14390 218 aa17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 FAM27BQ5VT28 67 aa17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 LAIR2Q6ISS4 152 aa17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 MEX3BQ6ZN04 569 aaKnown RBP17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 BHLHA15Q7RTS1 189 aaPredicted RBP17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 C17orf78Q8N4C9 275 aa17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 SLC22A24Q8N4F4 322 aa17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 C11orf40Q8WZ69 217 aa17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 ZMYND19Q96E35 227 aaPredicted RBP17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 MRPL22Q9NWU5 206 aaKnown RBP17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 RAD51DO75771 328 aa17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 MPZL1O95297 269 aa17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 HLA-DQA2P01906 255 aa17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 SCG5P05408 212 aa17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 HOXB1P14653 301 aaPredicted RBP17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 IGFBP2P18065 325 aa17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 LSM6P62312 80 aaKnown RBP17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 SGCAQ16586 387 aa17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 TBRG1Q3YBR2 411 aa17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 KLHL24Q6TFL4 600 aa17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 LYPD4Q6UWN0 246 aa17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 ZNF511Q8NB15 262 aa17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 STEAP2Q8NFT2 490 aa17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 SPOCK3Q9BQ16 436 aa17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 USB1Q9BQ65 265 aaKnown RBP17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 OR10A4Q9H209 315 aa17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 COMMD3-BMI1R4GMX3 469 aa17.37■□□□□ 0.37
PDLIM2-221ENST00000622702 C16orf97H3BN30 126 aa17.36■□□□□ 0.37
PDLIM2-221ENST00000622702 FARS2O95363 451 aaKnown RBP17.36■□□□□ 0.37
PDLIM2-221ENST00000622702 IL32P24001 234 aa17.36■□□□□ 0.37
PDLIM2-221ENST00000622702 CCKARP32238 428 aa17.36■□□□□ 0.37
PDLIM2-221ENST00000622702 UGT2B10P36537 528 aa17.36■□□□□ 0.37
PDLIM2-221ENST00000622702 MTNR1AP48039 350 aa17.36■□□□□ 0.37
PDLIM2-221ENST00000622702 MED21Q13503 144 aa17.36■□□□□ 0.37
PDLIM2-221ENST00000622702 TSC22D1Q15714 1073 aa17.36■□□□□ 0.37
PDLIM2-221ENST00000622702 SMN1Q16637 294 aaKnown RBP17.36■□□□□ 0.37
PDLIM2-221ENST00000622702 KRT80Q6KB66 452 aa17.36■□□□□ 0.37
PDLIM2-221ENST00000622702 B3GLCTQ6Y288 498 aa17.36■□□□□ 0.37
PDLIM2-221ENST00000622702 TIGD4Q8IY51 512 aa17.36■□□□□ 0.37
PDLIM2-221ENST00000622702 CCDC36Q8IYA8 594 aa17.36■□□□□ 0.37
PDLIM2-221ENST00000622702 ACBD4Q8NC06 268 aa17.36■□□□□ 0.37
PDLIM2-221ENST00000622702 HTRA1Q92743 480 aa17.36■□□□□ 0.37
PDLIM2-221ENST00000622702 KCNG2Q9UJ96 466 aa17.36■□□□□ 0.37
PDLIM2-221ENST00000622702 UNC79Q9P2D8 2635 aa17.36■□□□□ 0.37
PDLIM2-221ENST00000622702 DCHS2Q6V1P9 2916 aa17.35■□□□□ 0.37
PDLIM2-221ENST00000622702 A0A096LPE4 126 aa17.35■□□□□ 0.37
PDLIM2-221ENST00000622702 A0A1W2PPZ6 126 aa17.35■□□□□ 0.37
PDLIM2-221ENST00000622702 TVP23AA6NH52 213 aa17.35■□□□□ 0.37
PDLIM2-221ENST00000622702 CST2P09228 141 aa17.35■□□□□ 0.37
PDLIM2-221ENST00000622702 NUDT6P53370 316 aa17.35■□□□□ 0.37
PDLIM2-221ENST00000622702 CXCR4P61073 352 aa17.35■□□□□ 0.37
PDLIM2-221ENST00000622702 ZNF91Q05481 1191 aa17.35■□□□□ 0.37
PDLIM2-221ENST00000622702 SNTB1Q13884 538 aaKnown RBP17.35■□□□□ 0.37
PDLIM2-221ENST00000622702 ENDOGQ14249 297 aaKnown RBP17.35■□□□□ 0.37
PDLIM2-221ENST00000622702 MEP1BQ16820 701 aa17.35■□□□□ 0.37
PDLIM2-221ENST00000622702 PCK2Q16822 640 aa17.35■□□□□ 0.37
PDLIM2-221ENST00000622702 HIKESHIQ53FT3 197 aa17.35■□□□□ 0.37
PDLIM2-221ENST00000622702 TEX30Q5JUR7 227 aa17.35■□□□□ 0.37
PDLIM2-221ENST00000622702 C6orf141Q5SZD1 244 aa17.35■□□□□ 0.37
PDLIM2-221ENST00000622702 C1QTNF12Q5T7M4 302 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms