RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 THBS4P35443 961 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 CHI3L1P36222 383 aaPredicted RBP6.76□□□□□ -1.33
CLK1-215ENST00000621181 TGFBR2P37173 567 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 MAP2K4P45985 399 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 SELENOPP49908 381 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 KHKP50053 298 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 PLAURQ03405 335 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 LGALS3BPQ08380 585 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 FUT5Q11128 374 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 FADDQ13158 208 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 RIN1Q13671 783 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 OXA1LQ15070 435 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 C3orf36Q3SXR2 165 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 NIPAL3Q6P499 406 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 PRSS48Q7RTY5 328 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 CMIPQ8IY22 773 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 VPS37AQ8NEZ2 397 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 OR4C15Q8NGM1 316 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 DYNC2LI1Q8TCX1 351 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 CNOT9Q92600 299 aaKnown RBP6.76□□□□□ -1.33
CLK1-215ENST00000621181 ITPKCQ96DU7 683 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 HSH2DQ96JZ2 352 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 EPYCQ99645 322 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 TAPBPLQ9BX59 468 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 DGCR6LQ9BY27 220 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 MROQ9BYG7 248 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 TPK1Q9H3S4 243 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 NARFLQ9H6Q4 476 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 ZFAND3Q9H8U3 227 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 SEC61A2Q9H9S3 476 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 TPT1P8Q9HAU6 139 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 LPAR2Q9HBW0 351 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 FKBP14Q9NWM8 211 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 HIF1ANQ9NWT6 349 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 AASSQ9UDR5 926 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 RPS6KA6Q9UK32 745 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 GRIP1Q9Y3R0 1128 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 ARPC4-TTLL3A0A0A6YYG9 625 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 FUOMA2VDF0 154 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 AGAP5A6NIR3 686 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 LIPT2A6NK58 231 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 LYNX1G3V0Z9 82 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 SLC22A1O15245 554 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 KCNAB3O43448 404 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 DIRAS1O95057 198 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 IGKV3-15P01624 115 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 IGLV1-44P01699 117 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 FABP3P05413 133 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 CELA3BP08861 270 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 ADRA2AP08913 450 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 LYNX1P0DP58 116 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 UQCRC2P22695 453 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 CXCR1P25024 350 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 PCGF2P35227 344 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 COMPP49747 757 aaPredicted RBP6.76□□□□□ -1.33
CLK1-215ENST00000621181 BCAP31P51572 246 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 IL5RAQ01344 420 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 IFITM3Q01628 133 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 GNA13Q14344 377 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 SMN1Q16637 294 aaKnown RBP6.76□□□□□ -1.33
CLK1-215ENST00000621181 UBE2UQ5VVX9 321 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 PRAMEF8Q5VWM4 474 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 PRAMEF7Q5VXH5 474 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 ZBTB46Q86UZ6 589 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 CDK20Q8IZL9 346 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 BCL2L2Q92843 193 aaPredicted RBP6.76□□□□□ -1.33
CLK1-215ENST00000621181 UBE2FQ969M7 185 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 TMEM186Q96B77 213 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 HRASLS5Q96KN8 279 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 PANX1Q96RD7 426 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 NEURL2Q9BR09 285 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 SLC35A5Q9BS91 424 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 RIBC2Q9H4K1 309 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 CRLF2Q9HC73 371 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 ACOT13Q9NPJ3 140 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 PLCXD1Q9NUJ7 323 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 PDP1Q9P0J1 537 aaPredicted RBP6.76□□□□□ -1.33
CLK1-215ENST00000621181 CRNNQ9UBG3 495 aaPredicted RBP6.76□□□□□ -1.33
CLK1-215ENST00000621181 TPRKBQ9Y3C4 175 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 ORC6Q9Y5N6 252 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 SNX5Q9Y5X3 404 aa6.76□□□□□ -1.33
CLK1-215ENST00000621181 WNK2Q9Y3S1 2297 aa6.75□□□□□ -1.33
CLK1-215ENST00000621181 CLDN25C9JDP6 229 aa6.75□□□□□ -1.33
CLK1-215ENST00000621181 UPK3AO75631 287 aa6.75□□□□□ -1.33
CLK1-215ENST00000621181 SERPINB7O75635 380 aa6.75□□□□□ -1.33
CLK1-215ENST00000621181 VAMP5O95183 116 aa6.75□□□□□ -1.33
CLK1-215ENST00000621181 CPSF4O95639 269 aaKnown RBP6.75□□□□□ -1.33
CLK1-215ENST00000621181 MSMBP08118 114 aa6.75□□□□□ -1.33
CLK1-215ENST00000621181 GABRB1P18505 474 aa6.75□□□□□ -1.33
CLK1-215ENST00000621181 NR4A1P22736 598 aa6.75□□□□□ -1.33
CLK1-215ENST00000621181 CAPZA2P47755 286 aa6.75□□□□□ -1.33
CLK1-215ENST00000621181 PSMD7P51665 324 aa6.75□□□□□ -1.33
CLK1-215ENST00000621181 MVKQ03426 396 aa6.75□□□□□ -1.33
CLK1-215ENST00000621181 HGFACQ04756 655 aa6.75□□□□□ -1.33
CLK1-215ENST00000621181 SNTB2Q13425 540 aaKnown RBP6.75□□□□□ -1.33
CLK1-215ENST00000621181 RGNQ15493 299 aa6.75□□□□□ -1.33
CLK1-215ENST00000621181 MRPL2Q5T653 305 aaKnown RBP6.75□□□□□ -1.33
CLK1-215ENST00000621181 SAXO2Q658L1 398 aa6.75□□□□□ -1.33
CLK1-215ENST00000621181 ZNF621Q6ZSS3 439 aa6.75□□□□□ -1.33
CLK1-215ENST00000621181 CREB3L2Q70SY1 520 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms