RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 ZNF454Q8N9F8 522 aa18.4■□□□□ 0.54
PNKP-203ENST00000593946 THEM6Q8WUY1 208 aa18.4■□□□□ 0.54
PNKP-203ENST00000593946 ASB17Q8WXJ9 295 aa18.4■□□□□ 0.54
PNKP-203ENST00000593946 AMELYQ99218 206 aa18.4■□□□□ 0.54
PNKP-203ENST00000593946 GNG8Q9UK08 70 aa18.4■□□□□ 0.54
PNKP-203ENST00000593946 SF3B6Q9Y3B4 125 aaKnown RBP18.4■□□□□ 0.54
PNKP-203ENST00000593946 TLN1Q9Y490 2541 aaKnown RBP18.39■□□□□ 0.53
PNKP-203ENST00000593946 PCSK6P29122 969 aa18.39■□□□□ 0.53
PNKP-203ENST00000593946 GPR50Q13585 617 aa18.39■□□□□ 0.53
PNKP-203ENST00000593946 KCNMB1Q16558 191 aa18.39■□□□□ 0.53
PNKP-203ENST00000593946 SLC18B1Q6NT16 456 aa18.39■□□□□ 0.53
PNKP-203ENST00000593946 FOXL2NBQ6ZUU3 175 aa18.39■□□□□ 0.53
PNKP-203ENST00000593946 TUSC5Q8IXB3 177 aa18.39■□□□□ 0.53
PNKP-203ENST00000593946 ALDH16A1Q8IZ83 802 aa18.39■□□□□ 0.53
PNKP-203ENST00000593946 ZCCHC14Q8WYQ9 949 aaKnown RBP18.39■□□□□ 0.53
PNKP-203ENST00000593946 ULBP2Q9BZM5 246 aa18.39■□□□□ 0.53
PNKP-203ENST00000593946 ACOXLQ9NUZ1 547 aa18.39■□□□□ 0.53
PNKP-203ENST00000593946 LUZP4Q9P127 313 aa18.39■□□□□ 0.53
PNKP-203ENST00000593946 MRM2Q9UI43 246 aaKnown RBP18.39■□□□□ 0.53
PNKP-203ENST00000593946 NOSIPQ9Y314 301 aaKnown RBP18.39■□□□□ 0.53
PNKP-203ENST00000593946 SIRT4Q9Y6E7 314 aaPredicted RBP18.39■□□□□ 0.53
PNKP-203ENST00000593946 DOCK7Q96N67 2140 aa18.39■□□□□ 0.53
PNKP-203ENST00000593946 BSNQ9UPA5 3926 aa18.38■□□□□ 0.53
PNKP-203ENST00000593946 A0A1B0GTH9 108 aa18.38■□□□□ 0.53
PNKP-203ENST00000593946 OR14I1A6ND48 311 aa18.38■□□□□ 0.53
PNKP-203ENST00000593946 SLC22A20A6NK97 555 aa18.38■□□□□ 0.53
PNKP-203ENST00000593946 SLC22A1O15245 554 aa18.38■□□□□ 0.53
PNKP-203ENST00000593946 DHHO43323 396 aa18.38■□□□□ 0.53
PNKP-203ENST00000593946 SULT1C4O75897 302 aa18.38■□□□□ 0.53
PNKP-203ENST00000593946 ABHD16AO95870 558 aa18.38■□□□□ 0.53
PNKP-203ENST00000593946 TGM6O95932 706 aa18.38■□□□□ 0.53
PNKP-203ENST00000593946 FAM87AP0C7U9 286 aa18.38■□□□□ 0.53
PNKP-203ENST00000593946 PSMA1P25786 263 aaKnown RBP18.38■□□□□ 0.53
PNKP-203ENST00000593946 GABRA5P31644 462 aa18.38■□□□□ 0.53
PNKP-203ENST00000593946 CDAP32320 146 aa18.38■□□□□ 0.53
PNKP-203ENST00000593946 CRYBB2P43320 205 aa18.38■□□□□ 0.53
PNKP-203ENST00000593946 LSM3P62310 102 aaKnown RBP18.38■□□□□ 0.53
PNKP-203ENST00000593946 LINC00303Q3SY05 128 aa18.38■□□□□ 0.53
PNKP-203ENST00000593946 OR10H5Q8NGA6 315 aa18.38■□□□□ 0.53
PNKP-203ENST00000593946 TTYH2Q9BSA4 534 aa18.38■□□□□ 0.53
PNKP-203ENST00000593946 ABHD6Q9BV23 337 aa18.38■□□□□ 0.53
PNKP-203ENST00000593946 SEC61A2Q9H9S3 476 aa18.38■□□□□ 0.53
PNKP-203ENST00000593946 ZNF71Q9NQZ8 489 aaPredicted RBP18.38■□□□□ 0.53
PNKP-203ENST00000593946 POLE4Q9NR33 117 aa18.38■□□□□ 0.53
PNKP-203ENST00000593946 PTTG2Q9NZH5 202 aa18.38■□□□□ 0.53
PNKP-203ENST00000593946 CLCF1Q9UBD9 225 aa18.38■□□□□ 0.53
PNKP-203ENST00000593946 PSMD9O00233 223 aa18.37■□□□□ 0.53
PNKP-203ENST00000593946 UPK3AO75631 287 aa18.37■□□□□ 0.53
PNKP-203ENST00000593946 YES1P07947 543 aa18.37■□□□□ 0.53
PNKP-203ENST00000593946 OR8G3PP0DMU2 310 aa18.37■□□□□ 0.53
PNKP-203ENST00000593946 FCGR2AP12318 317 aa18.37■□□□□ 0.53
PNKP-203ENST00000593946 GBX2P52951 348 aaPredicted RBP18.37■□□□□ 0.53
PNKP-203ENST00000593946 VBP1P61758 197 aa18.37■□□□□ 0.53
PNKP-203ENST00000593946 EIF2B1Q14232 305 aaKnown RBP18.37■□□□□ 0.53
PNKP-203ENST00000593946 RIPPLY2Q5TAB7 128 aa18.37■□□□□ 0.53
PNKP-203ENST00000593946 RPTNQ6XPR3 784 aa18.37■□□□□ 0.53
PNKP-203ENST00000593946 CHCHD6Q9BRQ6 235 aa18.37■□□□□ 0.53
PNKP-203ENST00000593946 PARPBPQ9NWS1 579 aa18.37■□□□□ 0.53
PNKP-203ENST00000593946 CYB5R1Q9UHQ9 305 aa18.37■□□□□ 0.53
PNKP-203ENST00000593946 ST6GALNAC2Q9UJ37 374 aa18.37■□□□□ 0.53
PNKP-203ENST00000593946 TUBD1Q9UJT1 453 aa18.37■□□□□ 0.53
PNKP-203ENST00000593946 STUB1Q9UNE7 303 aa18.37■□□□□ 0.53
PNKP-203ENST00000593946 GRIP1Q9Y3R0 1128 aa18.37■□□□□ 0.53
PNKP-203ENST00000593946 A0A1W2PPW3 197 aa18.37■□□□□ 0.53
PNKP-203ENST00000593946 METTL15A6NJ78 407 aa18.37■□□□□ 0.53
PNKP-203ENST00000593946 PLPP2O43688 288 aa18.37■□□□□ 0.53
PNKP-203ENST00000593946 MRPL33O75394 65 aaKnown RBP18.37■□□□□ 0.53
PNKP-203ENST00000593946 GPX5O75715 221 aa18.37■□□□□ 0.53
PNKP-203ENST00000593946 KRT8P05787 483 aa18.37■□□□□ 0.53
PNKP-203ENST00000593946 NCS1P62166 190 aa18.37■□□□□ 0.53
PNKP-203ENST00000593946 RPS25P62851 125 aaKnown RBP18.37■□□□□ 0.53
PNKP-203ENST00000593946 SIRPAP78324 504 aa18.37■□□□□ 0.53
PNKP-203ENST00000593946 ROM1Q03395 351 aa18.37■□□□□ 0.53
PNKP-203ENST00000593946 NFATC3Q12968 1075 aa18.37■□□□□ 0.53
PNKP-203ENST00000593946 SPCS2Q15005 226 aa18.37■□□□□ 0.53
PNKP-203ENST00000593946 GPR137CQ8N3F9 429 aa18.37■□□□□ 0.53
PNKP-203ENST00000593946 Q8NA96 180 aa18.37■□□□□ 0.53
PNKP-203ENST00000593946 ST7LQ8TDW4 575 aa18.37■□□□□ 0.53
PNKP-203ENST00000593946 RNF166Q96A37 237 aaPredicted RBP18.37■□□□□ 0.53
PNKP-203ENST00000593946 GPR137Q96N19 417 aa18.37■□□□□ 0.53
PNKP-203ENST00000593946 OR8B4Q96RC9 309 aa18.37■□□□□ 0.53
PNKP-203ENST00000593946 GP6Q9HCN6 339 aa18.37■□□□□ 0.53
PNKP-203ENST00000593946 LOC100506127A0A0U1RQW1 187 aa18.36■□□□□ 0.53
PNKP-203ENST00000593946 OGG1O15527 345 aa18.36■□□□□ 0.53
PNKP-203ENST00000593946 ZNHIT1O43257 154 aa18.36■□□□□ 0.53
PNKP-203ENST00000593946 LRRTM2O43300 516 aa18.36■□□□□ 0.53
PNKP-203ENST00000593946 TMCC2O75069 709 aa18.36■□□□□ 0.53
PNKP-203ENST00000593946 TACSTD2P09758 323 aa18.36■□□□□ 0.53
PNKP-203ENST00000593946 CCDC58Q4VC31 144 aa18.36■□□□□ 0.53
PNKP-203ENST00000593946 SOWAHCQ53LP3 525 aaPredicted RBP18.36■□□□□ 0.53
PNKP-203ENST00000593946 DMKNQ6E0U4 476 aaPredicted RBP18.36■□□□□ 0.53
PNKP-203ENST00000593946 GDPGP1Q6ZNW5 385 aa18.36■□□□□ 0.53
PNKP-203ENST00000593946 FAM220AQ7Z4H9 259 aa18.36■□□□□ 0.53
PNKP-203ENST00000593946 LINC00346Q8IVM7 164 aa18.36■□□□□ 0.53
PNKP-203ENST00000593946 MCEMP1Q8IX19 187 aa18.36■□□□□ 0.53
PNKP-203ENST00000593946 OR52N5Q8NH56 324 aa18.36■□□□□ 0.53
PNKP-203ENST00000593946 ZNF837Q96EG3 531 aaPredicted RBP18.36■□□□□ 0.53
PNKP-203ENST00000593946 ALKBH3Q96Q83 286 aaPredicted RBP18.36■□□□□ 0.53
PNKP-203ENST00000593946 CENPOQ9BU64 300 aa18.36■□□□□ 0.53
PNKP-203ENST00000593946 SLCO5A1Q9H2Y9 848 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms