RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 S1PR1P21453 382 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 FOXK2Q01167 660 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 NAAAQ02083 359 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 TMEM71Q6P5X7 295 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 TSTD1Q8NFU3 115 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 PFN4Q8NHR9 129 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 FAM174AQ8TBP5 190 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 RNF141Q8WVD5 230 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 TMEM239Q8WW34 195 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 PELI1Q96FA3 418 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 LMF2Q9BU23 707 aaKnown RBP12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 HCAR1Q9BXC0 346 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 NOX4Q9NPH5 578 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 SLC2A4RGQ9NR83 387 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 SDHAF3Q9NRP4 125 aa12.65□□□□□ -0.38
RABGGTA-220ENST00000560998 IGHV1OR15-9A0A0B4J2B8 117 aa12.64□□□□□ -0.39
RABGGTA-220ENST00000560998 TTLL8A6PVC2 850 aa12.64□□□□□ -0.39
RABGGTA-220ENST00000560998 XRCC3O43542 346 aa12.64□□□□□ -0.39
RABGGTA-220ENST00000560998 OR2T7P0C7T2 308 aa12.64□□□□□ -0.39
RABGGTA-220ENST00000560998 SRFP11831 508 aa12.64□□□□□ -0.39
RABGGTA-220ENST00000560998 ZNF3P17036 446 aa12.64□□□□□ -0.39
RABGGTA-220ENST00000560998 RCC1P18754 421 aaPredicted RBP12.64□□□□□ -0.39
RABGGTA-220ENST00000560998 EIF2S3P41091 472 aaKnown RBP12.64□□□□□ -0.39
RABGGTA-220ENST00000560998 CSNK1EP49674 416 aaKnown RBP12.64□□□□□ -0.39
RABGGTA-220ENST00000560998 SLC16A1P53985 500 aa12.64□□□□□ -0.39
RABGGTA-220ENST00000560998 FXYD6P3P58550 94 aa12.64□□□□□ -0.39
RABGGTA-220ENST00000560998 UBE2MP61081 183 aaKnown RBP12.64□□□□□ -0.39
RABGGTA-220ENST00000560998 TMEM200AQ86VY9 491 aa12.64□□□□□ -0.39
RABGGTA-220ENST00000560998 SLC43A2Q8N370 569 aa12.64□□□□□ -0.39
RABGGTA-220ENST00000560998 POMGNT2Q8NAT1 580 aa12.64□□□□□ -0.39
RABGGTA-220ENST00000560998 STEAP2Q8NFT2 490 aa12.64□□□□□ -0.39
RABGGTA-220ENST00000560998 OR2T27Q8NH04 317 aa12.64□□□□□ -0.39
RABGGTA-220ENST00000560998 LRFN5Q96NI6 719 aa12.64□□□□□ -0.39
RABGGTA-220ENST00000560998 DPH1Q9BZG8 443 aa12.64□□□□□ -0.39
RABGGTA-220ENST00000560998 TPSD1Q9BZJ3 242 aa12.64□□□□□ -0.39
RABGGTA-220ENST00000560998 SLITRK2Q9H156 845 aa12.64□□□□□ -0.39
RABGGTA-220ENST00000560998 TMPRSS5Q9H3S3 457 aa12.64□□□□□ -0.39
RABGGTA-220ENST00000560998 TREM1Q9NP99 234 aa12.64□□□□□ -0.39
RABGGTA-220ENST00000560998 C20orf141Q9NUB4 165 aa12.64□□□□□ -0.39
RABGGTA-220ENST00000560998 UFSP2Q9NUQ7 469 aa12.64□□□□□ -0.39
RABGGTA-220ENST00000560998 SIDT1Q9NXL6 827 aaKnown RBP12.64□□□□□ -0.39
RABGGTA-220ENST00000560998 TREM2Q9NZC2 230 aa12.64□□□□□ -0.39
RABGGTA-220ENST00000560998 DHCR7Q9UBM7 475 aaKnown RBP12.64□□□□□ -0.39
RABGGTA-220ENST00000560998 FBXL21Q9UKT6 434 aa12.64□□□□□ -0.39
RABGGTA-220ENST00000560998 TRBV2A0A0J9YWF9 115 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 OR2AT4A6NND4 320 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 TGFBR3LH3BV60 316 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 FOXS1O43638 330 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 SRPX2O60687 465 aaPredicted RBP12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 ICOSLGO75144 302 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 RNH1P13489 461 aaKnown RBP12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 TPT1P13693 172 aaKnown RBP12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 FUT1P19526 365 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 CASRP41180 1078 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 RBM34P42696 430 aaKnown RBP12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 CAPZA1P52907 286 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 PJVKQ0ZLH3 352 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 SRSF5Q13243 272 aaKnown RBP12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 DRAM2Q6UX65 266 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 ARL14Q8N4G2 192 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 RPS4Y2Q8TD47 263 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 STK35Q8TDR2 534 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 DUSP19Q8WTR2 217 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 PEX11GQ96HA9 241 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 ZC3H10Q96K80 434 aaKnown RBP12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 SLC25A21Q9BQT8 299 aaPredicted RBP12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 ZNF559Q9BR84 538 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 OR51V1Q9H2C8 321 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 CAPN10Q9HC96 672 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 RCC2Q9P258 522 aaKnown RBP12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 ZNF337Q9Y3M9 751 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 OR6C76A6NM76 312 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 F5H0A9 414 aaPredicted RBP12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 F8VVB4 439 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 F8VWA3 439 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 MBTPS2O43462 519 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 MT-ND4LP03901 98 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 GUSBP08236 651 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 IGFBP4P22692 258 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 EDNRAP25101 427 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 FASLGP48023 281 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 EMDP50402 254 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 PSG6Q00889 435 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 FABP9Q0Z7S8 132 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 INPP5JQ15735 1006 aaPredicted RBP12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 ZNF124Q15973 351 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 PNLIPRP3Q17RR3 467 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 TP53I3Q53FA7 332 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 OR2B11Q5JQS5 317 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 KDF1Q8NAX2 398 aaPredicted RBP12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 SLC30A7Q8NEW0 376 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 TCTN2Q96GX1 697 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 MAP3K3Q99759 626 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 NRIP2Q9BQI9 281 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 LMAN1LQ9HAT1 526 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 TMEM27Q9HBJ8 222 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 MOKQ9UQ07 419 aa12.63□□□□□ -0.39
RABGGTA-220ENST00000560998 TRBV23-1A0A0A0MS06 115 aa12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 NPIPB9F8W1W9 429 aa12.62□□□□□ -0.39
RABGGTA-220ENST00000560998 SULT2B1O00204 365 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms