RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 TEX13CA0A0J9YWL9 993 aa10.73□□□□□ -0.69
SMAD3-208ENST00000558827 SOCS2O14508 198 aa10.73□□□□□ -0.69
SMAD3-208ENST00000558827 CDC14BO60729 498 aa10.73□□□□□ -0.69
SMAD3-208ENST00000558827 ENTPD5O75356 428 aa10.73□□□□□ -0.69
SMAD3-208ENST00000558827 NCR1O76036 304 aa10.73□□□□□ -0.69
SMAD3-208ENST00000558827 MPZL1O95297 269 aa10.73□□□□□ -0.69
SMAD3-208ENST00000558827 GPANK1O95872 356 aa10.73□□□□□ -0.69
SMAD3-208ENST00000558827 IGHMP01871 453 aa10.73□□□□□ -0.69
SMAD3-208ENST00000558827 ERCC1P07992 297 aaPredicted RBP10.73□□□□□ -0.69
SMAD3-208ENST00000558827 CD14P08571 375 aa10.73□□□□□ -0.69
SMAD3-208ENST00000558827 RHCEP18577 417 aa10.73□□□□□ -0.69
SMAD3-208ENST00000558827 STOMP27105 288 aa10.73□□□□□ -0.69
SMAD3-208ENST00000558827 RBMXP38159 391 aaKnown RBP10.73□□□□□ -0.69
SMAD3-208ENST00000558827 MAGEB1P43366 347 aa10.73□□□□□ -0.69
SMAD3-208ENST00000558827 CENPAP49450 140 aa10.73□□□□□ -0.69
SMAD3-208ENST00000558827 ZNF133P52736 654 aaPredicted RBP10.73□□□□□ -0.69
SMAD3-208ENST00000558827 UCP2P55851 309 aa10.73□□□□□ -0.69
SMAD3-208ENST00000558827 RPS23P62266 143 aaKnown RBP10.73□□□□□ -0.69
SMAD3-208ENST00000558827 SPIBQ01892 262 aa10.73□□□□□ -0.69
SMAD3-208ENST00000558827 CCNIQ14094 377 aa10.73□□□□□ -0.69
SMAD3-208ENST00000558827 KRT72Q14CN4 511 aa10.73□□□□□ -0.69
SMAD3-208ENST00000558827 MESTQ5EB52 335 aa10.73□□□□□ -0.69
SMAD3-208ENST00000558827 ELFN2Q5R3F8 820 aa10.73□□□□□ -0.69
SMAD3-208ENST00000558827 THEM4Q5T1C6 240 aa10.73□□□□□ -0.69
SMAD3-208ENST00000558827 CYP2R1Q6VVX0 501 aa10.73□□□□□ -0.69
SMAD3-208ENST00000558827 TMPRSS11FQ6ZWK6 438 aa10.73□□□□□ -0.69
SMAD3-208ENST00000558827 OR1J2Q8NGS2 313 aa10.73□□□□□ -0.69
SMAD3-208ENST00000558827 SYNPRQ8TBG9 265 aa10.73□□□□□ -0.69
SMAD3-208ENST00000558827 MSI2Q96DH6 328 aaKnown RBP10.73□□□□□ -0.69
SMAD3-208ENST00000558827 PYURFQ96I23 114 aa10.73□□□□□ -0.69
SMAD3-208ENST00000558827 RSRC1Q96IZ7 334 aaKnown RBP10.73□□□□□ -0.69
SMAD3-208ENST00000558827 ZNF570Q96NI8 536 aa10.73□□□□□ -0.69
SMAD3-208ENST00000558827 LRRC37BQ96QE4 947 aa10.73□□□□□ -0.69
SMAD3-208ENST00000558827 ZNF416Q9BWM5 594 aa10.73□□□□□ -0.69
SMAD3-208ENST00000558827 WNT5BQ9H1J7 359 aa10.73□□□□□ -0.69
SMAD3-208ENST00000558827 LRMDAQ9H2I8 198 aa10.73□□□□□ -0.69
SMAD3-208ENST00000558827 STX18Q9P2W9 335 aaKnown RBP10.73□□□□□ -0.69
SMAD3-208ENST00000558827 FBXL3Q9UKT7 428 aa10.73□□□□□ -0.69
SMAD3-208ENST00000558827 SAMD4AQ9UPU9 718 aaKnown RBP10.73□□□□□ -0.69
SMAD3-208ENST00000558827 AURKCQ9UQB9 309 aa10.73□□□□□ -0.69
SMAD3-208ENST00000558827 SLC22A23A1A5C7 686 aa10.72□□□□□ -0.69
SMAD3-208ENST00000558827 UNC119BA6NIH7 251 aa10.72□□□□□ -0.69
SMAD3-208ENST00000558827 A6NIZ1 184 aa10.72□□□□□ -0.69
SMAD3-208ENST00000558827 CENPBD1B2RD01 187 aa10.72□□□□□ -0.69
SMAD3-208ENST00000558827 ARPC2O15144 300 aa10.72□□□□□ -0.69
SMAD3-208ENST00000558827 LMX1BO60663 402 aa10.72□□□□□ -0.69
SMAD3-208ENST00000558827 PTP4A3O75365 173 aa10.72□□□□□ -0.69
SMAD3-208ENST00000558827 PPP1R3DO95685 299 aa10.72□□□□□ -0.69
SMAD3-208ENST00000558827 TGFAP01135 160 aa10.72□□□□□ -0.69
SMAD3-208ENST00000558827 CTLA4P16410 223 aa10.72□□□□□ -0.69
SMAD3-208ENST00000558827 MPV17P39210 176 aa10.72□□□□□ -0.69
SMAD3-208ENST00000558827 WNT5AP41221 380 aa10.72□□□□□ -0.69
SMAD3-208ENST00000558827 GUCA1AP43080 201 aaPredicted RBP10.72□□□□□ -0.69
SMAD3-208ENST00000558827 OMPP47874 163 aa10.72□□□□□ -0.69
SMAD3-208ENST00000558827 GDI2P50395 445 aaKnown RBP10.72□□□□□ -0.69
SMAD3-208ENST00000558827 RAP1BP61224 184 aa10.72□□□□□ -0.69
SMAD3-208ENST00000558827 RAP1AP62834 184 aa10.72□□□□□ -0.69
SMAD3-208ENST00000558827 SRSF2Q01130 221 aaKnown RBP10.72□□□□□ -0.69
SMAD3-208ENST00000558827 ENDOGQ14249 297 aaKnown RBP10.72□□□□□ -0.69
SMAD3-208ENST00000558827 TAF11Q15544 211 aa10.72□□□□□ -0.69
SMAD3-208ENST00000558827 TSTQ16762 297 aaKnown RBP10.72□□□□□ -0.69
SMAD3-208ENST00000558827 CHRFAM7AQ494W8 412 aa10.72□□□□□ -0.69
SMAD3-208ENST00000558827 ZNF771Q7L3S4 317 aaPredicted RBP10.72□□□□□ -0.69
SMAD3-208ENST00000558827 HIPK1Q86Z02 1210 aa10.72□□□□□ -0.69
SMAD3-208ENST00000558827 ZNF101Q8IZC7 436 aa10.72□□□□□ -0.69
SMAD3-208ENST00000558827 PGAM4Q8N0Y7 254 aa10.72□□□□□ -0.69
SMAD3-208ENST00000558827 ZNF786Q8N393 782 aa10.72□□□□□ -0.69
SMAD3-208ENST00000558827 C11orf40Q8WZ69 217 aa10.72□□□□□ -0.69
SMAD3-208ENST00000558827 YIPF5Q969M3 257 aa10.72□□□□□ -0.69
SMAD3-208ENST00000558827 NSMCE2Q96MF7 247 aa10.72□□□□□ -0.69
SMAD3-208ENST00000558827 OR2H1Q9GZK4 316 aa10.72□□□□□ -0.69
SMAD3-208ENST00000558827 POLE4Q9NR33 117 aa10.72□□□□□ -0.69
SMAD3-208ENST00000558827 TREM2Q9NZC2 230 aa10.72□□□□□ -0.69
SMAD3-208ENST00000558827 CD300AQ9UGN4 299 aa10.72□□□□□ -0.69
SMAD3-208ENST00000558827 TMEM5Q9Y2B1 443 aa10.72□□□□□ -0.69
SMAD3-208ENST00000558827 COL6A5A8TX70 2615 aa10.72□□□□□ -0.69
SMAD3-208ENST00000558827 A0A1W2PRQ8 180 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 HTR3EA5X5Y0 456 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 NPIPB13A6NJU9 1138 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 B2RBV5 119 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 NPIPB4C9JG80 1138 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 NDUFS8O00217 210 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 XKRYO14609 159 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 WNT9BO14905 357 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 TPD52L2O43399 206 aaKnown RBP10.71□□□□□ -0.69
SMAD3-208ENST00000558827 SLC16A7O60669 478 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 LILRA1O75019 489 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 NDUFB2O95178 105 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 GADD45GO95257 159 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 NGFP01138 241 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 PTHP01270 115 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 ZNF23P17027 643 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 MSR1P21757 451 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 RAD52P43351 418 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 LIMS1P48059 325 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 EVX1P49640 407 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 GZMKP49863 264 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 KLF3P57682 345 aaPredicted RBP10.71□□□□□ -0.69
SMAD3-208ENST00000558827 FXYD6P3P58550 94 aa10.71□□□□□ -0.69
SMAD3-208ENST00000558827 CCL8P80075 99 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms