RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 MSL2Q9HCI7 577 aa9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 DECR2Q9NUI1 292 aa9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 SLCO1C1Q9NYB5 712 aa9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 KLHL21Q9UJP4 597 aa9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 SNX13Q9Y5W8 968 aa9.79□□□□□ -0.84
PRPF40B-212ENST00000551111 TMEM89A2RUT3 159 aa9.78□□□□□ -0.84
PRPF40B-212ENST00000551111 H7C1C5 153 aa9.78□□□□□ -0.84
PRPF40B-212ENST00000551111 DRD4P21917 467 aa9.78□□□□□ -0.84
PRPF40B-212ENST00000551111 YAP1P46937 504 aaKnown RBP9.78□□□□□ -0.84
PRPF40B-212ENST00000551111 ARFIP2P53365 341 aa9.78□□□□□ -0.84
PRPF40B-212ENST00000551111 LCN6P62502 163 aa9.78□□□□□ -0.84
PRPF40B-212ENST00000551111 ACTG1P63261 375 aa9.78□□□□□ -0.84
PRPF40B-212ENST00000551111 CD47Q08722 323 aa9.78□□□□□ -0.84
PRPF40B-212ENST00000551111 PCGF3Q3KNV8 242 aa9.78□□□□□ -0.84
PRPF40B-212ENST00000551111 NRN1LQ496H8 165 aa9.78□□□□□ -0.84
PRPF40B-212ENST00000551111 INTS11Q5TA45 600 aaKnown RBP9.78□□□□□ -0.84
PRPF40B-212ENST00000551111 ZNF774Q6NX45 483 aa9.78□□□□□ -0.84
PRPF40B-212ENST00000551111 C1QL2Q7Z5L3 287 aa9.78□□□□□ -0.84
PRPF40B-212ENST00000551111 SLC30A8Q8IWU4 369 aa9.78□□□□□ -0.84
PRPF40B-212ENST00000551111 ZNF418Q8TF45 676 aaPredicted RBP9.78□□□□□ -0.84
PRPF40B-212ENST00000551111 FAM216AQ8WUB2 273 aa9.78□□□□□ -0.84
PRPF40B-212ENST00000551111 ZFAND2BQ8WV99 257 aa9.78□□□□□ -0.84
PRPF40B-212ENST00000551111 C10orf82Q8WW14 230 aa9.78□□□□□ -0.84
PRPF40B-212ENST00000551111 LIPHQ8WWY8 451 aa9.78□□□□□ -0.84
PRPF40B-212ENST00000551111 LRRC58Q96CX6 371 aa9.78□□□□□ -0.84
PRPF40B-212ENST00000551111 OR2H1Q9GZK4 316 aa9.78□□□□□ -0.84
PRPF40B-212ENST00000551111 TXNIPQ9H3M7 391 aa9.78□□□□□ -0.84
PRPF40B-212ENST00000551111 C1orf198Q9H425 327 aa9.78□□□□□ -0.84
PRPF40B-212ENST00000551111 MMP26Q9NRE1 261 aa9.78□□□□□ -0.84
PRPF40B-212ENST00000551111 RHCGQ9UBD6 479 aa9.78□□□□□ -0.84
PRPF40B-212ENST00000551111 A4GNTQ9UNA3 340 aa9.78□□□□□ -0.84
PRPF40B-212ENST00000551111 MEGF8Q7Z7M0 2845 aa9.77□□□□□ -0.85
PRPF40B-212ENST00000551111 TRAV27A0A087WT01 109 aa9.77□□□□□ -0.85
PRPF40B-212ENST00000551111 CLDN25C9JDP6 229 aa9.77□□□□□ -0.85
PRPF40B-212ENST00000551111 J3KTA2 159 aa9.77□□□□□ -0.85
PRPF40B-212ENST00000551111 IMPA2O14732 288 aa9.77□□□□□ -0.85
PRPF40B-212ENST00000551111 OR5F1O95221 314 aa9.77□□□□□ -0.85
PRPF40B-212ENST00000551111 FSHBP01225 129 aa9.77□□□□□ -0.85
PRPF40B-212ENST00000551111 PTHP01270 115 aa9.77□□□□□ -0.85
PRPF40B-212ENST00000551111 ZNF26P17031 533 aaPredicted RBP9.77□□□□□ -0.85
PRPF40B-212ENST00000551111 RBM34P42696 430 aaKnown RBP9.77□□□□□ -0.85
PRPF40B-212ENST00000551111 COMPP49747 757 aaPredicted RBP9.77□□□□□ -0.85
PRPF40B-212ENST00000551111 DAP3P51398 398 aaKnown RBP9.77□□□□□ -0.85
PRPF40B-212ENST00000551111 SEC61A1P61619 476 aaKnown RBP9.77□□□□□ -0.85
PRPF40B-212ENST00000551111 ENDOGQ14249 297 aaKnown RBP9.77□□□□□ -0.85
PRPF40B-212ENST00000551111 HFEQ30201 348 aa9.77□□□□□ -0.85
PRPF40B-212ENST00000551111 ZNF718Q3SXZ3 478 aa9.77□□□□□ -0.85
PRPF40B-212ENST00000551111 CYBRD1Q53TN4 286 aa9.77□□□□□ -0.85
PRPF40B-212ENST00000551111 FAM27BQ5VT28 67 aa9.77□□□□□ -0.85
PRPF40B-212ENST00000551111 DCAF12L2Q5VW00 463 aa9.77□□□□□ -0.85
PRPF40B-212ENST00000551111 DPPA2Q7Z7J5 298 aa9.77□□□□□ -0.85
PRPF40B-212ENST00000551111 ABHD4Q8TB40 342 aa9.77□□□□□ -0.85
PRPF40B-212ENST00000551111 TSPEARQ8WU66 669 aa9.77□□□□□ -0.85
PRPF40B-212ENST00000551111 STON2Q8WXE9 905 aa9.77□□□□□ -0.85
PRPF40B-212ENST00000551111 TAF15Q92804 592 aaKnown RBP eCLIP9.77□□□□□ -0.85
PRPF40B-212ENST00000551111 GCDHQ92947 438 aaPredicted RBP9.77□□□□□ -0.85
PRPF40B-212ENST00000551111 DVL3Q92997 716 aaPredicted RBP9.77□□□□□ -0.85
PRPF40B-212ENST00000551111 LRMDAQ9H2I8 198 aa9.77□□□□□ -0.85
PRPF40B-212ENST00000551111 CCNB1IP1Q9NPC3 277 aa9.77□□□□□ -0.85
PRPF40B-212ENST00000551111 MAN2C1Q9NTJ4 1040 aa9.77□□□□□ -0.85
PRPF40B-212ENST00000551111 UBAP1Q9NZ09 502 aa9.77□□□□□ -0.85
PRPF40B-212ENST00000551111 GPR160Q9UJ42 338 aa9.77□□□□□ -0.85
PRPF40B-212ENST00000551111 MED31Q9Y3C7 131 aa9.77□□□□□ -0.85
PRPF40B-212ENST00000551111 SOX21Q9Y651 276 aaPredicted RBP9.77□□□□□ -0.85
PRPF40B-212ENST00000551111 A0A0G2JMP0 313 aa9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 A0A0X1KG70 313 aa9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 ISPDA4D126 451 aa9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 CENPBD1B2RD01 187 aa9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 TRAPPC2LH3BP13 241 aa9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 FFAR1O14842 300 aa9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 SPRY1O43609 319 aaPredicted RBP9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 ENTPD5O75356 428 aa9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 IFI30P13284 250 aa9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 ANPEPP15144 967 aa9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 GDI2P50395 445 aaKnown RBP9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 ERFP50548 548 aa9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 CTXN1P60606 82 aa9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 RPL27P61353 136 aaKnown RBP9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 PPP1CBP62140 327 aa9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 DBPQ10586 325 aaPredicted RBP9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 PSG7Q13046 419 aa9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 CYLC2Q14093 348 aaPredicted RBP9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 ALG10Q5BKT4 473 aa9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 MBNL2Q5VZF2 373 aaKnown RBP9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 CGB2Q6NT52 195 aa9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 TBPL2Q6SJ96 375 aa9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 Q6ZR03 302 aa9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 USP43Q70EL4 1123 aa9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 VTCN1Q7Z7D3 282 aa9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 BCL6BQ8N143 479 aaPredicted RBP9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 C3orf56Q8N813 242 aa9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 OR4M2Q8NGB6 313 aa9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 OR51A7Q8NH64 312 aa9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 SLC7A6Q92536 515 aa9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 RAB39BQ96DA2 213 aa9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 BPIFA2Q96DR5 249 aa9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 ELMOD3Q96FG2 381 aa9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 TPD52L3Q96J77 140 aa9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 DUX5Q96PT3 197 aa9.76□□□□□ -0.85
PRPF40B-212ENST00000551111 DCLRE1CQ96SD1 692 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms