RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 H0YIZ8 118 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 H0YJX3 145 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 IMPA2O14732 288 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 ARPC3O15145 178 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 AHCYL1O43865 530 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 AQP8O94778 261 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 AKR7A3O95154 331 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 NDUFB2O95178 105 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 ATP6V1G2O95670 118 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 TGM6O95932 706 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 PLGP00747 810 aaPredicted RBP5.07□□□□□ -1.6
SCAF11-213ENST00000550629 IGHMP01871 453 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 YES1P07947 543 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 IL6RP08887 468 aaPredicted RBP5.07□□□□□ -1.6
SCAF11-213ENST00000550629 ADORA3P0DMS8 318 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 ZNF43P17038 809 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 IGFBP5P24593 272 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 SLC6A6P31641 620 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 CEACAM8P31997 349 aaPredicted RBP5.07□□□□□ -1.6
SCAF11-213ENST00000550629 GPR4P46093 362 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 RAD23AP54725 363 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 RAP1BP61224 184 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 RAP1AP62834 184 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 RPL18Q07020 188 aaKnown RBP5.07□□□□□ -1.6
SCAF11-213ENST00000550629 SRSF4Q08170 494 aaKnown RBP5.07□□□□□ -1.6
SCAF11-213ENST00000550629 RASGEF1BQ0VAM2 473 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 C1DQ13901 141 aaKnown RBP5.07□□□□□ -1.6
SCAF11-213ENST00000550629 DAG1Q14118 895 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 HSPB2Q16082 182 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 C3AR1Q16581 482 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 MS4A18Q3C1V0 323 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 ALG10Q5BKT4 473 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 OGFRL1Q5TC84 451 aaPredicted RBP5.07□□□□□ -1.6
SCAF11-213ENST00000550629 GPR139Q6DWJ6 353 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 RTL6Q6ICC9 239 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 PPP4R4Q6NUP7 873 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 NHLRC1Q6VVB1 395 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 DPY19L2P2Q6ZN68 376 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 ZNF620Q6ZNG0 422 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 ZBTB49Q6ZSB9 765 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 P4HA3Q7Z4N8 544 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 EPHX4Q8IUS5 362 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 UEVLDQ8IX04 471 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 MCEMP1Q8IX19 187 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 CBR4Q8N4T8 237 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 LRRC17Q8N6Y2 441 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 TMEM99Q8N816 258 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 ICA1LQ8NDH6 482 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 OR9K2Q8NGE7 335 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 OR9Q2Q8NGE9 314 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 OR52L1Q8NGH7 329 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 OR13C2Q8NGS9 318 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 FANK1Q8TC84 345 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 DDB2Q92466 427 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 TMEM45BQ96B21 275 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 ZNF845Q96IR2 970 aaPredicted RBP5.07□□□□□ -1.6
SCAF11-213ENST00000550629 ADAD1Q96M93 576 aaKnown RBP5.07□□□□□ -1.6
SCAF11-213ENST00000550629 TNFRSF13CQ96RJ3 184 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 GPA33Q99795 319 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 SFXN3Q9BWM7 321 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 TEX12Q9BXU0 123 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 GABARAPL3Q9BY60 117 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 PRRG4Q9BZD6 226 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 SEMA6AQ9H2E6 1030 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 MCCC2Q9HCC0 563 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 INIPQ9NRY2 104 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 KRT84Q9NSB2 600 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 TAS2R5Q9NYW4 299 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 B3GAT1Q9P2W7 334 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 ZNF629Q9UEG4 869 aaPredicted RBP5.07□□□□□ -1.6
SCAF11-213ENST00000550629 BAIAP2Q9UQB8 552 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 OSGIN2Q9Y236 505 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 MEMO1Q9Y316 297 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 NINQ8N4C6 2090 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 NCKAP5O14513 1909 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 COL6A6A6NMZ7 2263 aa5.07□□□□□ -1.6
SCAF11-213ENST00000550629 HEATR5AQ86XA9 2040 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 MYO18BQ8IUG5 2567 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 TRAV27A0A087WT01 109 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 TRGV8A0A0C4DH27 118 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 A0A1W2PPL8 197 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 SAC3D1A6NKF1 404 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 KRTAP29-1A8MX34 341 aaPredicted RBP5.06□□□□□ -1.6
SCAF11-213ENST00000550629 ZNF814B7Z6K7 855 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 LRRN3E7EW58 273 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 BLOC1S5-TXNDC5H3BN57 136 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 EI24O14681 340 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 RNF13O43567 381 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 TRAF3IP2O43734 574 aaPredicted RBP5.06□□□□□ -1.6
SCAF11-213ENST00000550629 TXNDC12O95881 172 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 PRB1P04280 392 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 CD14P08571 375 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 NR2C1P13056 603 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 POU2F1P14859 743 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 ZNF26P17031 533 aaPredicted RBP5.06□□□□□ -1.6
SCAF11-213ENST00000550629 AGAP20933 346 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 PTNP21246 168 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 PRKACGP22612 351 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 AHCYP23526 432 aa5.06□□□□□ -1.6
SCAF11-213ENST00000550629 AGTR1P30556 359 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms