RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 GATSQ8NAP1 163 aa11.64□□□□□ -0.55
SFSWAP-209ENST00000540469 OR4A4PQ8NGN8 299 aa11.64□□□□□ -0.55
SFSWAP-209ENST00000540469 TCTEX1D2Q8WW35 142 aa11.64□□□□□ -0.55
SFSWAP-209ENST00000540469 PFDN5Q99471 154 aa11.64□□□□□ -0.55
SFSWAP-209ENST00000540469 PRRT1Q99946 306 aa11.64□□□□□ -0.55
SFSWAP-209ENST00000540469 ATXN7L1Q9ULK2 861 aaPredicted RBP11.64□□□□□ -0.55
SFSWAP-209ENST00000540469 OR6A2O95222 327 aa11.64□□□□□ -0.55
SFSWAP-209ENST00000540469 SERPINA5P05154 406 aa11.64□□□□□ -0.55
SFSWAP-209ENST00000540469 APEHP13798 732 aaKnown RBP11.64□□□□□ -0.55
SFSWAP-209ENST00000540469 MUC1P15941 1255 aaPredicted RBP11.64□□□□□ -0.55
SFSWAP-209ENST00000540469 NQO2P16083 231 aa11.64□□□□□ -0.55
SFSWAP-209ENST00000540469 SERPINF1P36955 418 aa11.64□□□□□ -0.55
SFSWAP-209ENST00000540469 ZNF813Q6ZN06 617 aa11.64□□□□□ -0.55
SFSWAP-209ENST00000540469 WDSUB1Q8N9V3 476 aa11.64□□□□□ -0.55
SFSWAP-209ENST00000540469 SMARCD2Q92925 531 aa11.64□□□□□ -0.55
SFSWAP-209ENST00000540469 CLCC1Q96S66 551 aa11.64□□□□□ -0.55
SFSWAP-209ENST00000540469 MAP3K3Q99759 626 aa11.64□□□□□ -0.55
SFSWAP-209ENST00000540469 C1orf198Q9H425 327 aa11.64□□□□□ -0.55
SFSWAP-209ENST00000540469 DHDHQ9UQ10 334 aa11.64□□□□□ -0.55
SFSWAP-209ENST00000540469 BRINP1O60477 761 aa11.64□□□□□ -0.55
SFSWAP-209ENST00000540469 DOK2O60496 412 aa11.64□□□□□ -0.55
SFSWAP-209ENST00000540469 DNAJB6O75190 326 aa11.64□□□□□ -0.55
SFSWAP-209ENST00000540469 UPK3AO75631 287 aa11.64□□□□□ -0.55
SFSWAP-209ENST00000540469 HTR3BO95264 441 aa11.64□□□□□ -0.55
SFSWAP-209ENST00000540469 MAOAP21397 527 aa11.64□□□□□ -0.55
SFSWAP-209ENST00000540469 TCEAL5Q5H9L2 206 aa11.64□□□□□ -0.55
SFSWAP-209ENST00000540469 ETV3LQ6ZN32 361 aa11.64□□□□□ -0.55
SFSWAP-209ENST00000540469 CA5BP1Q8WTZ4 195 aa11.64□□□□□ -0.55
SFSWAP-209ENST00000540469 RSRP1Q9BUV0 290 aa11.64□□□□□ -0.55
SFSWAP-209ENST00000540469 GRHPRQ9UBQ7 328 aa11.64□□□□□ -0.55
SFSWAP-209ENST00000540469 A0A1B0GTI1 187 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 OR4C45A6NMZ5 311 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 SLC17A2O00624 439 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 GMFGO60234 142 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 STK17BO94768 372 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 LAG3P18627 525 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 ZNF10P21506 573 aaPredicted RBP11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 HTR2CP28335 458 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 TSFMP43897 325 aaKnown RBP11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 DNASE1L1P49184 302 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 F2RL1P55085 397 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 RASGEF1BQ0VAM2 473 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 ELAVL3Q14576 367 aaKnown RBP11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 SLC29A4Q7RTT9 530 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 ZNF550Q7Z398 422 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 ZNF615Q8N8J6 731 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 VSIG4Q9Y279 399 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 TMED7Q9Y3B3 224 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 KNL1Q8NG31 2342 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 RNASEK-C17orf49H0YIS7 233 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 GPANK1O95872 356 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 AK1P00568 194 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 CSTAP01040 98 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 ERCC1P07992 297 aaPredicted RBP11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 OR2B8PP59922 312 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 S100A10P60903 97 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 ENPP2Q13822 863 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 RUNX2Q13950 521 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 ADAM5Q6NVV9 412 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 IL34Q6ZMJ4 242 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 MISPQ8IVT2 679 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 FAM219AQ8IW50 185 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 SLC43A2Q8N370 569 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 OR10G6Q8NH81 332 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 SUSD6Q92537 303 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 ISOC2Q96AB3 205 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 C20orf24Q9BUV8 137 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 OR51M1Q9H341 326 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 ASH2LQ9UBL3 628 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 SLC22A13Q9Y226 551 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 TRBV5-5A0A0J9YX44 114 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 NUDT19A8MXV4 375 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 WRBO00258 174 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 FKTNO75072 461 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 PRPS1P60891 318 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 DCDP81605 110 aaKnown RBP11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 SPOCK1Q08629 439 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 DHCR24Q15392 516 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 TGIF1Q15583 401 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 CEBPEQ15744 281 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 ALG10Q5BKT4 473 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 POMZP3Q6PJE2 187 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 USP53Q70EK8 1073 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 RD3Q7Z3Z2 195 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 ETFBKMTQ8IXQ9 262 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 AKR1E2Q96JD6 320 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 ELOVL3Q9HB03 270 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 GSKIPQ9P0R6 139 aa11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 MRPS33Q9Y291 106 aaKnown RBP11.63□□□□□ -0.55
SFSWAP-209ENST00000540469 C9orf170A2RU37 121 aa11.62□□□□□ -0.55
SFSWAP-209ENST00000540469 URADA6NGE7 173 aa11.62□□□□□ -0.55
SFSWAP-209ENST00000540469 FGF17O60258 216 aa11.62□□□□□ -0.55
SFSWAP-209ENST00000540469 FBXO24O75426 580 aa11.62□□□□□ -0.55
SFSWAP-209ENST00000540469 ADH5P11766 374 aa11.62□□□□□ -0.55
SFSWAP-209ENST00000540469 RPS4Y1P22090 263 aaKnown RBP11.62□□□□□ -0.55
SFSWAP-209ENST00000540469 SCAND1P57086 179 aa11.62□□□□□ -0.55
SFSWAP-209ENST00000540469 SSBP1Q04837 148 aaKnown RBP11.62□□□□□ -0.55
SFSWAP-209ENST00000540469 MEF2DQ14814 521 aa11.62□□□□□ -0.55
SFSWAP-209ENST00000540469 OR52W1Q6IF63 320 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms